Os01g0850100

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Revision as of 05:10, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0850100| Description = Conserved hypothetical protein| Version = NM_001051347.1 GI:115441064 GeneID:4324799| Length = 5033 bp| Definition ...")
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Gene Name

Os01g0850100

Description

Conserved hypothetical protein

Version

NM_001051347.1 GI:115441064 GeneID:4324799

Length

5033 bp

Definition

Oryza sativa Japonica Group Os01g0850100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:38296011..38301043

Sequence Coding Region

38296383..38296415,38296492..38296581,38298183..38298269,38298363..38298431,38299060..38299140
,38299229..38299300,38299402..38299462,38299548..38299650,38299811..38299906
,38299982..38300028,38300111..38300271,38300509..38300589

Expression

GEO Profiles:Os01g0850100

Genome Context

<gbrowseImage1> name=NC_008394:38296011..38301043 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:38296011..38301043 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggtttacatcgctcgggaggctaccaagctatggaggaaggtgtgtgcggagatagcggtggagctgcagcttcttttcgagaagtggcgcttgctccttgccggattggtgtttcagtacattcatggactggctgctcgaggagtacattacttgcatcgacctgggccactgctccaggacttgggattcatggctcttccggaacttggacaggacaaaggatatgttagtgagagcgtgttcacattcatcttcatttccttcctgttgtggagttttcacccttttatttatcatagcaaacgtttctacactgttctactctggcgcagggtgctggcctttttagttgcttcacaatttttgcggattattactttctattccactcagctcccaggtccaaattatcactgtcgggagggctcaaaaatggccactcttccaccgccccataatgtacttgaagtgctcctgatcaactttcctcgtggagtgctttttggttgtggcgatctgattttttcatctcacatgatctttacacttgttttcgtgcgtacatatcataaatatggatccaaaaggttgattaagattcttgcttggctgatggctataattcagagtcttcttataattgcttctcgaaaacactacagcgtggatgttgttgttgcttggtatactgtcaatttggttgtattctttattgacaataagctaccagaaatgccagatcgcacaaatggatcatctttgctcccagttacagcgaaagataaagatggcagaacaaaggaagagctccataaactagagaaggattgcaagatgaaggaagagttccataaattgttaaatggaaacactgtcgattctactgatcggcggcaacgtgtgcagatgaacggaaaacatggcgaggacatcaaccacacactctcagatgccactcccaatggcacatga</cdnaseq>

Protein Sequence

<aaseq>MAVYIAREATKLWRKVCAEIAVELQLLFEKWRLLLAGLVFQYIH GLAARGVHYLHRPGPLLQDLGFMALPELGQDKGYVSESVFTFIFISFLLWSFHPFIYH SKRFYTVLLWRRVLAFLVASQFLRIITFYSTQLPGPNYHCREGSKMATLPPPHNVLEV LLINFPRGVLFGCGDLIFSSHMIFTLVFVRTYHKYGSKRLIKILAWLMAIIQSLLIIA SRKHYSVDVVVAWYTVNLVVFFIDNKLPEMPDRTNGSSLLPVTAKDKDGRTKEELHKL EKDCKMKEEFHKLLNGNTVDSTDRRQRVQMNGKHGEDINHTLSDATPNGT</aaseq>

Gene Sequence

<dnaseqindica>373..405#482..571#2173..2259#2353..2421#3050..3130#3219..3290#3392..3452#3538..3640#3801..3896#3972..4018#4101..4261#4499..4579#actccgctgacccttttgttcctcgaacccaccctccccctcccggattcaaaccgtcgacgccgtcgccgcgtgactctcctccgcggcggcctgagcctgaccacccccaccctcactcgcctcgtcgccggaaaattgcattcgcgccgctcgccgctccccccccctcttggaggccccggagctagctgcttggggggatcctcctccgctcggcgggcggcgatctcgcggcggtcccgaggaggtggcgaggtcctggctgcgacgagatgccgtgatcccagcagtgatgcgcggatcggagcatgggtgtgagccctccagggtgtacctgtaggcggcgggcgaggagcgggagttgcggccatggcggtttacatcgctcgggaggctaccaaggtgtggattcgttggcacatggggttgggatgttctagctatggtttgtgatttttttttacccgcctttgtgcagctatggaggaaggtgtgtgcggagatagcggtggagctgcagcttcttttcgagaagtggcgcttgctccttgccggattggtgtttcaggtaaacttcagtttatttcctttgattttttttatcctccgtggctccgtgtgcataattgccatatttgtggcgtgctttgtaattcttgactgctattttctgtgtgtttcaaaaattttgatatagcacgtggtcgaccccttttgaacggcaattttagctagctctgcatcgtacaatctatgctaattttagagttggatttggggaccggtacgaattctgtgtcaacactgcccagagggtttagttgtatgaactaagtgtggtaaattatacctcacctcgagcaagggtgtggctgattgaacatttgcatgaaaactatatgtctgcacagtttaggtgaatttagtttgttgttaatcaagaggggagtattggggatggaagtatgattcaatctgtttatgtgatatgtcctcagagtagaaaaaaaaatccagagcttgttgagaaatgttggatacttggatgagcaactactgcaaattcacagaaagcagttcaagcactggcaatcttggttgagctggagccaaggtcaaaagcaatataccatgatagatgtcatatcatggggagaaattgttgccttgtgtcttcttcaaaagttccctgcttagagagtttgagacaattagcttgctattggtccctcttgtaaaatatgttagataaattgcctcttatgtttgtctagattttgcaagtatttatttatttctgaaattcttttcataaaatcagcgcgcttattatgcagttactgtgatgtttcttgtcctgcatgtagtctcctcgaaactgtaatcatgctcatgcaaacaacttgtaggttggtttattgaactaaagatgattattaatgccattctggaaatgaattggatattcatgggcctgtcatcagatatattcgcttgtactgtaacaggatatgctctattatgagaagataataattaaatatcataagttgacctcagaaataatactgcaattaacattttgggataataggacttgcattattttctattttgagttgagatataggagatgaattcatttgaacttaggtgcaacctatcctcttgatatttaataaaatcgcgcacccaatcctttgacatagttggttccatttgtgatactgctccctgtcagacatgctccattccctagaaatctgactcaactgtggtgatttcatataactttttttctccatgtttgtgttattataattgatttacttccttagatgagtaaacattttagagcgcagtaagatctacagtccttttctgtacacgatggagaaagaatgaaactaactgttgggaaagcgtgagatttgatttcccatatggcttgataggttgcaatgcgaaatgccggttggcgcctaaataaaatctttcttctccttgtattttctacaggttctctttttgagagcgtggaaaaataaaataaaatgtccaacttttattgttcttcatcatcttctcaagatttacttcttacataatattatctgttcattaatggatgatattggaaattcatgcaatccttttacctataattagtacattcatggactggctgctcgaggagtacattacttgcatcgacctgggccactgctccaggacttgggattcatggctcttccggtatgtgacctggtaaaaattaatctcatatctgtcaaagaacaatggtactgatttgttcctgccactggtggcacttctctttgtttttaggaacttggacaggacaaaggatatgttagtgagagcgtgttcacattcatcttcatttccttcctgttggtaggtggctattttgcttcactgcatatgatcatctattgcatagttcatacatatttgataattaatgatgtatgttttgtaatgaccctttcttcttatatcttgaataagttagccagaaatcttgtagtgtaaatggcaatgacagccctgctgatattgacaagtaaacaacacaatttgaaagagctgcagtgagaaataaatttgaaaatagtggctatccagattgatttatgaaagtgaaaaagtaatttgataatttagcttagtgtgattttgtaccttatgaccatgggttaatcaattgctctccgataaattattgccacctccaatatgtactacagtatggtagtttggtccttttagtaaggtcttgtctgcatgatctgtaagaacaaaaaatgtttttcgaagctatttgttgcaccaattttctgtacaattaagatgttaaaatggtgagaatgtgagatgcacttctttgtgttgtagtatagcagaggcgtttatgtattttgctcctctccgcatcaacagaatttggtttgtttaagctacttgcatgtaatgcttgatcataaagtagtgtaattgactgacaatctttatggttttgcagtggagttttcacccttttatttatcatagcaaacgtttctacactgttctactctggcgcagggtgctggcctttttagttgtaagtggctgtcccatgtcttttaacttatctctgcaaccattataatcatgatgtaacaatgatgtttttcttttctttcctctaggcttcacaatttttgcggattattactttctattccactcagctcccaggtccaaattatcactgtcgggaggtaaccttaatttctcatcatagctaaagcatactcgtgaactacatactgtcatactttgttaaaggcttactgaagtcatttatctttgcattttgcagggctcaaaaatggccactcttccaccgccccataatgtacttgaagtgctcctgatcaactgtaagcctttcatcatttgttgggttgaatcttttgtccagatgggtggaaaatcatctgaatttcctttttttttcctttgcagttcctcgtggagtgctttttggttgtggcgatctgattttttcatctcacatgatctttacacttgttttcgtgcgtacatatcataaatatggatccaaaaggtattaaaatatagaatgcatatgcgcacacacgcttatttgtctctttccctggtcattttttgcctgtaatatgtcataaatttggttcaagttgcatgctaactcagtactctgacatctgatcttctaatctcattggttgttcctgttttgttaggttgattaagattcttgcttggctgatggctataattcagagtcttcttataattgcttctcgaaaacactacagcgtggatgttgttgttgcttggtaggataaagtttcatttctgtaatatgattgccttgtagtggcatctgactttggtgcattctttttcgtcaggtatactgtcaatttggttgtattctttattgacaataagctaccaggtaccctcttttagcttcctttaattatgcagtattatccatgtggttcattctgtaacaatcgttagtggcaattctacagaaatgccagatcgcacaaatggatcatctttgctcccagttacagcgaaagataaagatggcagaacaaaggaagagctccataaactagagaaggattgcaagatgaaggaagagttccataaattgttaaatggaaacactgtcgattctactgatcgggtatcatagagcattaatcagctactctatgttctattttaatctccaaatgaacttcccaaacttagaagttattttgtcataaaattttcatccaacaatgaaacatatctacatttcattgtagttcaattgcaacataaccacaagccttttatcttctacatagtacctagcaacttatatgcagcaaccattttgatatttcccctaacgtacctatttccgattatccagcggcaacgtgtgcagatgaacggaaaacatggcgaggacatcaaccacacactctcagatgccactcccaatggcacatgatcagctgcttttcatcaggcggcttgtctagttgtctttcacattgacaggggaatctgctaggagacaaagaatgcttggtttcctctgtatgatgactggcttctcaggtgcctctgcccctgcattttgtctgtccgccatggcaatatgttcacggatgaatgagacagagccaggtgccatagcaccagcattgctatggactgcaaaggaatcagagtctcaactctcaagtctcccagcgacttttctcaggctgccattacagttttgcacccttgtatcgaatctctagttctcttccctcaatttcttaggttatggaatgaacactttcaggttgatttgagaagcatagcttctcccgctgtatatatattgtcacattgatgaacttagcttaatcttggcatggatatactcatatatctatcgccgattggtcattttc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0850100, RefSeq:Os01g0850100