Os01g0851400

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Revision as of 05:10, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0851400| Description = Machado-Joseph disease protein MJD family protein| Version = NM_001051356.2 GI:297597971 GeneID:4324808| Length = 40...")
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Gene Name

Os01g0851400

Description

Machado-Joseph disease protein MJD family protein

Version

NM_001051356.2 GI:297597971 GeneID:4324808

Length

4065 bp

Definition

Oryza sativa Japonica Group Os01g0851400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:38412551..38416615

Sequence Coding Region

38412602..38413339,38416252..38416524

Expression

GEO Profiles:Os01g0851400

Genome Context

<gbrowseImage1> name=NC_008394:38412551..38416615 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:38412551..38416615 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggaggcggcggcggcgagcaacggggggctgctgtaccacgaggtgcaggaggggaagctctgcgccgtgcactgcgtgaacaccaccctgcaggggcccttcttctccgagttcgacctctccgcgctcgccgtcgacctcgaccagcgggagcgccaggtcatgtccgagggcgcggccggcgccgccaccaccgccgcgggggacttcctcgccgagggtgagggctcccacaacgtctcccttggaggagacttcagcatccaggttctgcagaaggcacttgaagtttgggatctgcaagttatcccccttgactccccagatgtggggtcatgcctatttgaccctgagctggaaactgctttcatttgccatctgcaggaccactggttctgcattaggaaggtaaatggagagtggtacaacttcaatagtctgtaccctgctcctgagcatctatcaaagttttacctatcagctttcatcgacaccctgaaggggtcaggctggagtatctttgcagtgaggggcaattttcctaaggagtgtcccatggcaacggaaggctctaatggtttcgggcagtggctgactcctgatgatgcccggaggataacctcctcttgtaaccaggtccaaacacctactcagcaggcaggcgtctctctagttgctgatcaatcagaggaaatgagtgaaatggatatgattgctgcacagcaggaagaagctgacttaaatgctgctatagctgctagcctgatggacactgggggtccatttgctaattatgcagctcacgaagaaagcaggtctcaggatgcttttgcaattgaatcaacatcaggtgaaatgagcaaagacggcaatctggaggagcaaggggctaacaagtctgaaacaagcgagcctaacagcgataatattgagtctgcttcaggcagtaacccgaagcagaacactacctctttagagggaaaagaatctataaaagaagattag</cdnaseq>

Protein Sequence

<aaseq>MEEAAAASNGGLLYHEVQEGKLCAVHCVNTTLQGPFFSEFDLSA LAVDLDQRERQVMSEGAAGAATTAAGDFLAEGEGSHNVSLGGDFSIQVLQKALEVWDL QVIPLDSPDVGSCLFDPELETAFICHLQDHWFCIRKVNGEWYNFNSLYPAPEHLSKFY LSAFIDTLKGSGWSIFAVRGNFPKECPMATEGSNGFGQWLTPDDARRITSSCNQVQTP TQQAGVSLVADQSEEMSEMDMIAAQQEEADLNAAIAASLMDTGGPFANYAAHEESRSQ DAFAIESTSGEMSKDGNLEEQGANKSETSEPNSDNIESASGSNPKQNTTSLEGKESIK ED</aaseq>

Gene Sequence

<dnaseqindica>3277..4014#92..364#gaatctacctcgctacacagtggtaggggtagagggagggtagaagagaagaggggggaatcgccggagggttcgagaagattctagagggatggaggaggcggcggcggcgagcaacggggggctgctgtaccacgaggtgcaggaggggaagctctgcgccgtgcactgcgtgaacaccaccctgcaggggcccttcttctccgagttcgacctctccgcgctcgccgtcgacctcgaccagcgggagcgccaggtcatgtccgagggcgcggccggcgccgccaccaccgccgcgggggacttcctcgccgagggtgagggctcccacaacgtctcccttggaggagacttcagcatccaggttggcttgccccgtctatggccctccgccatccacgctcgtggggggtttatttatttcttttcgcttgtcttctgtcgtcctggttagtgagattgttgccgagatgaacttaggttgcctgtaggcctgtaagcttcgaatttagcaagattgttgtcgaaatgaacttggttgcctgtaggcctataacctcgaagttagtgagattgttgtcgaaatgagtttggttgtctgtaggcttgtaggttcgaattttggggggtttgcttgacgtatcatgttgttgatggtacattctagtttaagattctcagatggcttccggaattccaaataataaatgatttatagcatagtggtcaatatgttatcatgttgaggatggtgaaggaatgtttatttgtctgagacaggaacttgcccacactattgttctcaaatgcagataaaatcatataatttttattgaaacctttctatatggttaggtaatatgaagggtttatatttatcctagacatcagcatttgcatgattcctttttgtagtcacaactttgctagttaggaatatgttcataggtttttgttgcagcagtgtaagtactatgtggtgatgatgacaggagattgcatattgctgtatagtttcttcttgagaagttacagaaattctatgtgactacatctgtttactcccatagttgcacgttcatttaaattaacaacatgtgggaaatagttgggtgagagggctttttgtaaacgtcgacaagagttctcttggcaggttgcagtttttcatgttacgtacttcactacttgccatgcaaagatacaagtaagtgcgtgcatgcatgcatgcatatataattattaattcttctgcgattattccgaccaaatttatgttcgtggtgtgcgccataaagcttttacttgttttgttgctttgagctttgtcgtgtactgaattgtgacattaaggagaaatttatgttctagctgtctaggtgttatctcttacctgttttaggaaaaacagcataagaggtttttgaaaacctgtttggtgtttatgggaattttaattttacattaagaacatcaacggtgttgacatggacattaaggtttgtattatacttttagtaacaatagaaaagaacaaaaatctgaagtttgcgctgagtccattccacttatgggcaaaccgcagtaaagctctgtcatctggggtctaacgtacaagcagagggggtgatggcaaggagcagtccaggatgcggcaggcccaggcccaagttattctctgagaccatatccttctctggctgagataagcccttattctaaattagttatggttagaatagtcagtttattttaggatttggtaagagttggtttgagttagttttcgactcagattgagttaatagtttgatttggaaactattgttaggggtggctttataatcaagctcacggcaattgtttagcggaaaatgcaattaattcttttctctagccgtttctaatgtccttgcctccctgatgcagtgctgatcatggcaatcaaacaccacccttgaggtccagggccatgacctatcacctctcacgattatgatcttcaacatatttgacccactaacatacctgcccatgacaagctcgcagtagttgagtttgtcattaaagcttgtggcttgccagttctatcattgtggtagactggtgtcctagatatgcctatatttacattatcaattgccaagaatataatagatcctcaaatgcaagtacaactactggttaatgttttgccacctttttttattaaaatttgaaggtatcaattttacagtttgcggtagaaaaagatttagcgaattcaggacttcgctgttagcaatgattagcgagcccaaaaatatggtgaaaatgttgtccatctatgttttctcagtccatgcactattgtttattgtttttgcacatatgctgccgatatttggatgttctgtatccctagttatccttgatgcatgtctctgtcaaatgtggccaataccaatttgctgtaaataacattaaccatgtttgatatgttaccttttaaatttggggtatgcaagttttgcaactcttgtcccttgggatccatgggagaagaataaattgtgcctgttcccactgcccactgtaaatagtgtaacatgtttactctgctctggcagcattgcatatttcggaattgttacatcatgtaaattctcttgccatactagtgacagatttatttccatgtgcctttggtatacatgagctgatatgtctctttcattcaacttattcaggtgattctttatgtaatagttaaaacttaaaaccttgtcactgaatggttaactagaactaaatgatagtcttagatctatttagttagagagaacattctgaattcatatttttctggtaaagtacatttagttttttattccttcatatcggtcattaatcattatctatggcatttaagaccatatttcattaggagtagtttttctatgtggaggagcatttttgcctgtaacctgaatcttgattccctagggtactttttgtctgcatttctgaaggaaaatctccatatggtctatggcttttatatccctgtgtgtagttcatgttcttcatgggctatgaaattccttagaaattgtaatgtcttagataagtgttaagtggttttgatgcttggagcagtaaataccctattccttattatggcagcgcgatgtcttttacgcatagttactcaagctaatatattgttacaactcatttccagtgactacgctgcaagttcatacactcaactatgcttttcatcttactctataggttctgcagaaggcacttgaagtttgggatctgcaagttatcccccttgactccccagatgtggggtcatgcctatttgaccctgagctggaaactgctttcatttgccatctgcaggaccactggttctgcattaggaaggtaaatggagagtggtacaacttcaatagtctgtaccctgctcctgagcatctatcaaagttttacctatcagctttcatcgacaccctgaaggggtcaggctggagtatctttgcagtgaggggcaattttcctaaggagtgtcccatggcaacggaaggctctaatggtttcgggcagtggctgactcctgatgatgcccggaggataacctcctcttgtaaccaggtccaaacacctactcagcaggcaggcgtctctctagttgctgatcaatcagaggaaatgagtgaaatggatatgattgctgcacagcaggaagaagctgacttaaatgctgctatagctgctagcctgatggacactgggggtccatttgctaattatgcagctcacgaagaaagcaggtctcaggatgcttttgcaattgaatcaacatcaggtgaaatgagcaaagacggcaatctggaggagcaaggggctaacaagtctgaaacaagcgagcctaacagcgataatattgagtctgcttcaggcagtaacccgaagcagaacactacctctttagagggaaaagaatctataaaagaagattaggacggcatgattcgggatggaactgtattagaatatacagacaacaaaaag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0851400, RefSeq:Os01g0851400