Os01g0851700

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Revision as of 05:10, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0851700| Description = Similar to Cytosolic starch phosphorylase (Fragment)| Version = NM_001051358.1 GI:115441086 GeneID:4324810| Length =...")
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Gene Name

Os01g0851700

Description

Similar to Cytosolic starch phosphorylase (Fragment)

Version

NM_001051358.1 GI:115441086 GeneID:4324810

Length

6158 bp

Definition

Oryza sativa Japonica Group Os01g0851700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:38426168..38432325

Sequence Coding Region

38426447..38426573,38426941..38427131,38427334..38427597,38427803..38427961,38428064..38428267
,38428353..38428571,38428779..38428910,38428994..38429111,38429258..38429442
,38429851..38429943,38430407..38430596,38431088..38431173,38431259..38431435
,38431729..38431908,38432011..38432211

Expression

GEO Profiles:Os01g0851700

Genome Context

<gbrowseImage1> name=NC_008394:38426168..38432325 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:38426168..38432325 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccggagagcaacggcgccgcgtgcggcgcggcggagaaggtgaagccggcggccagccccgcgtcggaggagccggccgccatcgccggtaacatctccttccacgcgcagtacagcccccacttctcgccgctcgcgttcggccccgagcaggccttctactccaccgccgagagcgtccgcgatcacctcgtccagagatggaacgagacgtacttgcatttccacaagacggatccgaagcagacgtactacctctccatggagtacctgcagggccgcgcgctcaccaacgccgtcggcaacctcggcatcaccggcgcctacgcggaggccgtgaagaagttcgggtacgagctcgaggccctcgtcgggcaggaaaaagatgcagctctgggaaatggtggcttgggtaggctcgcatcttgctttttggattcgatggcaacactaaatttgcctgcttggggatatggtctgcggtaccgatatggtctattcaaacaatgcatcaccaaggaaggccaggaagaaattgctgaagattggcttgagaagttcagcccatgggaaattgtcaggcatgacattgtatacccaatcagattttttggccacgttgagattttgccagatggatctcgtaaatgggtggggggagaagttctcaatgctttagcatatgatgtgccaattcctgggtacaagacaaaaaatgcaatcagtcttcgtctttgggacgcaaaagctagtgcggaggattttaacttatttcaattcaatgatggccagtatgagtccgctgctcaacttcatgctagggcacaacagatatgtgccgttctctatcccggtgatgctacagaagaaggaaagcttctcagactgaagcaacagtatttcctttgcagtgcatcgcttcaggatatttttttcaggtttaaagaaaggaaagctgacagagtttctgggaaatggagtgagttccctgcaaaagttgctgttcaattgaatgacactcacccaactcttgcgattcctgagctgatgaggctactcatggatgtggagggacttggttgggatgaagcatgggatatcacaaataaaacaattgcctacaccaatcacactgttcttcctgaagcccttgagaaatggtcgcagattgtaatgaggaaattacttccacgacacatggaaattatcgaggaaattgacaagcggttcaaggaaatggtaatctccacccggaaggaaatggagggaaagattgactccatgagaatcttagacaactcaaatcctcagaagccagtagtgcgcatggcaaatttgtgcgtagtgtctgcccatacggtgaatggagtggctgagttacacagcaacattttgaaggaagagctttttgcagactatctctctatatggcccaacaaatttcagaacaaaacaaatggaattacacctcgtagatggctccgtttctgcaacccagagttgagtgaaatagtaacaaaatggctaaaaacagatcagtggacaagcaaccttgatcttcttaccggacttcggaaatttgcagatgatgaaaagcttcatgctgagtgggcatcagctaagttggctagcaaaaaacgcctagccaagcatgtgttggatgtgacaggtgttacaatcgacccaaatagcctttttgatatacaaattaaacgcattcatgagtacaagagacagctgctaaacattttgggagctgtttacagatacaagaagttaaagggaatgagtgcagaggagagacaaaaagttacgccacgcactgtcatgatagggggaaaagcattcgcgacttacaccaatgccaaaagaatagtaaaattggtaaatgatgttggtgctgtggtgaacaatgatcctgatgttaataaatacctaaaggtggtgttcattcccaactacaatgtatctgtggccgaggtgctcattcctgggagtgaactgtcacagcacatcagtaccgcaggcatggaagcaagtggaacgagtaatatgaaattctctctgaatggttgtgttatcattggtactcttgatggagctaatgttgagataagagaggaagtgggacaagaaaatttcttcctttttggtgccaaggcagatcaagttgctgggctgaggaaggatagagagaatggcttgttcaaaccagacccacgttttgaagaagccaagcagcttataaggagtggtgcttttggcacctatgactatgctcccctcttggattctcttgaaggaaattctggatttggtcgtggtgattatttcctcgttggctatgatttcccaagctatattgatgcacaggcccaggttgatgaagcctacaaggataagaaaaaatggatcaagatgtctatactgaacacagctggaagtggcaaattcagcagcgaccgtactatcgctcagtatgcaaaggaaatatggggcattactgctagccctgtctcctaa</cdnaseq>

Protein Sequence

<aaseq>MPESNGAACGAAEKVKPAASPASEEPAAIAGNISFHAQYSPHFS PLAFGPEQAFYSTAESVRDHLVQRWNETYLHFHKTDPKQTYYLSMEYLQGRALTNAVG NLGITGAYAEAVKKFGYELEALVGQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYG LRYRYGLFKQCITKEGQEEIAEDWLEKFSPWEIVRHDIVYPIRFFGHVEILPDGSRKW VGGEVLNALAYDVPIPGYKTKNAISLRLWDAKASAEDFNLFQFNDGQYESAAQLHARA QQICAVLYPGDATEEGKLLRLKQQYFLCSASLQDIFFRFKERKADRVSGKWSEFPAKV AVQLNDTHPTLAIPELMRLLMDVEGLGWDEAWDITNKTIAYTNHTVLPEALEKWSQIV MRKLLPRHMEIIEEIDKRFKEMVISTRKEMEGKIDSMRILDNSNPQKPVVRMANLCVV SAHTVNGVAELHSNILKEELFADYLSIWPNKFQNKTNGITPRRWLRFCNPELSEIVTK WLKTDQWTSNLDLLTGLRKFADDEKLHAEWASAKLASKKRLAKHVLDVTGVTIDPNSL FDIQIKRIHEYKRQLLNILGAVYRYKKLKGMSAEERQKVTPRTVMIGGKAFATYTNAK RIVKLVNDVGAVVNNDPDVNKYLKVVFIPNYNVSVAEVLIPGSELSQHISTAGMEASG TSNMKFSLNGCVIIGTLDGANVEIREEVGQENFFLFGAKADQVAGLRKDRENGLFKPD PRFEEAKQLIRSGAFGTYDYAPLLDSLEGNSGFGRGDYFLVGYDFPSYIDAQAQVDEA YKDKKKWIKMSILNTAGSGKFSSDRTIAQYAKEIWGITASPVS</aaseq>

Gene Sequence

<dnaseqindica>5753..5879#5195..5385#4729..4992#4365..4523#4059..4262#3755..3973#3416..3547#3215..3332#2884..3068#2383..2475#1730..1919#1153..1238#891..1067#418..597#115..315#cgttccgttccgttccattccattcggtgcctctgcccggagccgaactccgacgccttatcgactcactcaccaagtgctcgacgcaattccccaccggggagcccgcccgccatgccggagagcaacggcgccgcgtgcggcgcggcggagaaggtgaagccggcggccagccccgcgtcggaggagccggccgccatcgccggtaacatctccttccacgcgcagtacagcccccacttctcgccgctcgcgttcggccccgagcaggccttctactccaccgccgagagcgtccgcgatcacctcgtccaggttcgtgagcacgcagaatcctaagcgttcgtcgcggcgcccggccgtgcccgaggccagaggcccagaggtgtgatctctacttcccccgcgtgtgtgcagagatggaacgagacgtacttgcatttccacaagacggatccgaagcagacgtactacctctccatggagtacctgcagggccgcgcgctcaccaacgccgtcggcaacctcggcatcaccggcgcctacgcggaggccgtgaagaagttcgggtacgagctcgaggccctcgtcgggcaggtgagctccctttgagtgttttctaaattaaaacgtgctctttttttttctgaagactattttagtacagtatcgcttgttagcgtcattattaaactagctagcgctttgtttgattgtgccataatctaacgggaataacgcttgtatgtattcttattttagaaacagttgaagtatccggttagatggattagatttgatccgatgtttaaccaaaataaagtatggttcaaaagcatagaagttgtaccgtatccattttctaaacatgtgttctgctctgtactcaggaaaaagatgcagctctgggaaatggtggcttgggtaggctcgcatcttgctttttggattcgatggcaacactaaatttgcctgcttggggatatggtctgcggtaccgatatggtctattcaaacaatgcatcaccaaggaaggccaggaagaaattgctgaagattggcttgaggtaccaactggaatgtacacaagttcctctctcgtcatcagtttctctagctgctgctgatgagccacatgtttatttctttcagaagttcagcccatgggaaattgtcaggcatgacattgtatacccaatcagattttttggccacgttgagattttgccagatggatcgtaagtacaagttccatttttttagaaaatgttgactaatagttaaatatgacattatatagcttgtgttgccctccatattaaaaaaaaaaggtgcctgaatcagatttattttcttcaactccatttagagatctaggatcattcttggatataacgaaagaacattatgcttgctttgctaggccttttcagcgcattttcttgacctctacttctcttttcactcttttggcaactggatcaaatgaccaaaacccatgagaaatgctttgccaacaccattcttgtttcaaagtactattatttcatgctgtttaaaagaaacagggttaatacaattcttatttttggcttggtagacatgatagttgcaattctgtacattggaattatcatgcattgtgcaggccccatagcaggcatacctgtaaattggtgtttactgcaaggatttctgtccttttaactgcttgtttacttttgtttagtcgtaaatgggtggggggagaagttctcaatgctttagcatatgatgtgccaattcctgggtacaagacaaaaaatgcaatcagtcttcgtctttgggacgcaaaagctagtgcggaggattttaacttatttcaattcaatgatggccagtatgagtccgctgctcaacttcatgctagggcacaacaggtgacatttcatcttgaactgattttgtcagttgtgcatttaagttgcattagcagggactaaatcaagactgatgcctttaattgatgcaaatacttctgctgatcaatatttattcttttgtcacataaacatctatcagtcatttttaagaaatagaaacagcaatgtagtatatacaacctaactcaatgtagtatatacaactaaacggtgaatatatctcaatcaaacagcttacagtatatctttaatcaaacagtttagttggtcactgaaaaaacacaagttgtgtcttgtagtttggcatggttttcaattgtggctataggtccattttaactaagaattacagtagaaaatgttgtgctatatatttcctatcttttattgtatattctcgccattcctttcccttaatgaatgttatgttgatagacgtctcttgtctatggctctgcagatatgtgccgttctctatcccggtgatgctacagaagaaggaaagcttctcagactgaagcaacagtatttcctttgcagtgcatcgcttcaggtaataattaattttatttggaagcatggttactgtaagagaaacctatcacagtgcctcctatgtccacaccagtcttttgttgtgaattgttgttgtgcgatactcattaaagagtgatggttgtagtgatctattgttgcaacattctatatgtcttttctgtcttgaatgggagaatgttaaaccgagttgtatcaaggagagttatatttttatctaaaaaaaggagagttaaatttaacaaattatcatgagcatcatttcaatccaagaacatttgggtcactctttatttttacttttaagtttttttttaatctaagctttctcagtgtcttgatttttttaatatctgcaaggactgaagactgttcataagcataactgacaatgaactatttgcaggatatttttttcaggtttaaagaaaggaaagctgacagagtttctgggaaatggagtgagttccctgcaaaagttgctgttcaattgaatgacactcacccaactcttgcgattcctgagctgatgaggctactcatggatgtggagggacttggttgggatgaagcatgggatatcacaaataagtgagctctaatatgacaagtgacaatataatttgatctcttttcttatctttttccaccattgtttatttttccgcttttcattttaacaagagtaattcaacttaaaagcttgacctaatcaataaattatttgaatggtccagaacaattgcctacaccaatcacactgttcttcctgaagcccttgagaaatggtcgcagattgtaatgaggaaattacttccacgacacatggaaattatcgaggaaattgacaagcgggtaagtgccatgtcacatgtatgcatactttttatacactacagttatggtaaaatatgacacctagtgcaattggcttgcagttcaaggaaatggtaatctccacccggaaggaaatggagggaaagattgactccatgagaatcttagacaactcaaatcctcagaagccagtagtgcgcatggcaaatttgtgcgtagtgtctgcccatacggtaagtgcagttatttgtgtttgatgctcaatgttctataacctttttcacaacacaactattcatcatgtccattctaatggaaactaccttgaccatcttaccatcaatatggatccccactatttttttaagtatgtcaacattatttgctttctcatataagttgaggaggtcgtactgaagtgtgctgaattctctccacaggtgaatggagtggctgagttacacagcaacattttgaaggaagagctttttgcagactatctctctatatggcccaacaaatttcagaacaaaacaaatggaattacacctcgtagatggctccgtttctgcaacccagagttgagtgaaatagtaacaaaatggctaaaaacagatcagtggacaagcaaccttgatcttcttaccggacttcggaaagtatgtgtgcatccttctaaaccttgcaccatttttccttgctattactcatctgactacttaagtataaccgaaagcgttacagtttgcagatgatgaaaagcttcatgctgagtgggcatcagctaagttggctagcaaaaaacgcctagccaagcatgtgttggatgtgacaggtgttacaatcgacccaaatagcctttttgatatacaaattaaacgcattcatgagtacaagagacagctgctaaacattttgggagctgtttacagatacaagaagttaaaggtactaaagactccccatactcttcagtaataccatgcttgtctaaatttaaatggaagttctcaatatttcggttctgaaatagccttatgaatcttgtagggaatgagtgcagaggagagacaaaaagttacgccacgcactgtcatgatagggggaaaagcattcgcgacttacaccaatgccaaaagaatagtaaaattggtaaatgatgttggtgctgtggtgaacaatgatcctgatgttaataaatacctaaaggtatggaacttttgcattctatcgcatccaaaacaaacatgtcacttctcaaattggccatcagagtcttatatgtccaccatctattcaaaataatgtcattatcatatagtgagtaatattaagataatctagatttgtaatccttacacaaatatttgattgtaattttgaattaaaatgtggacctccttgttcctctcaggtggtgttcattcccaactacaatgtatctgtggccgaggtgctcattcctgggagtgaactgtcacagcacatcagtaccgcaggcatggaagcaagtggaacgagtaatatgaaattctctctgaatggttgtgttatcattggtactcttgatggagctaatgttgagataagagaggaagtgggacaagaaaatttcttcctttttggtgccaaggcagatcaagttgctgggctgaggaaggatagagagaatggcttggtaagatattttctttctttctttcttttgaacgaagcttggtaagatattttctagtagataagtgatatacaaccattattagatgagcttgacttgcaaatagctaaattgaatttgttggtattgttagcttattgatctggtatatatttctcacaagtggatgaattatcattaaccttgcttacgttaccaacagttcaaaccagacccacgttttgaagaagccaagcagcttataaggagtggtgcttttggcacctatgactatgctcccctcttggattctcttgaaggaaattctggatttggtcgtggtgattatttcctcgttggctatgatttcccaagctatattgatgcacaggcccaggttgatgaagcctacaagtaaggataacaaacatgctatttgcatttacttactccatacattgcaaattcttgaacaaacataaccatgctccaacaggtcttaatgctatgggaaattttaatgtactcttagtgctctgaatttgctatagtaatcaaaatgtgatcagtttgcattcttctgttgagggcctactgctctggctcagccttatccacgacccgtaatatggttagcaaatagcaatcaattaatatgacaactcaaccagtatgtaattctgcacaacctatgtgagacaaccaaacacaagaacattgcgctcttattgctatctgttcttgcactgaatgctttgattaaatcctgtttctctgacagggataagaaaaaatggatcaagatgtctatactgaacacagctggaagtggcaaattcagcagcgaccgtactatcgctcagtatgcaaaggaaatatggggcattactgctagccctgtctcctaaatacgagatgcaccaagacgaagctcatcaagatggacgctatattatgcaataataaggattagataacgatccacggtgaataacacttgcttccgttgtaagctggagcgcggagaacccagcaacgagtgaagctggcactttgaagtgcgctggaaaacgcaaccctcttttgctttatgctaatatatatgtatttggtctggaacaaggtacttgtgagatgtactggatggaatcttccgtcacaaaataaaacgattcaaatttttggtt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0851700, RefSeq:Os01g0851700