Os01g0852500

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Revision as of 05:11, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0852500| Description = ELM2 domain containing protein| Version = NM_001051363.1 GI:115441096 GeneID:4324815| Length = 5073 bp| Definition ...")
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Gene Name

Os01g0852500

Description

ELM2 domain containing protein

Version

NM_001051363.1 GI:115441096 GeneID:4324815

Length

5073 bp

Definition

Oryza sativa Japonica Group Os01g0852500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:38473936..38479008

Sequence Coding Region

38474326..38474362,38474550..38475274,38478423..38478872

Expression

GEO Profiles:Os01g0852500

Genome Context

<gbrowseImage1> name=NC_008394:38473936..38479008 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:38473936..38479008 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtcgggatgtaccagcagcagctcgtcgaagatcccttccccctgagcggcggctactgcagtgaccagccacggcacgcgcccgcctccgcctccacctccacctccacatcctcgtcagctgccgttgcagcctcgccgctggcgcaggcgcatggagccggcgagccacggcggctgttcgaggcgttcatgggggagatcctgctcccgctccgcggcgagggaggtgccaacggcggcggcgtcggccgcggtcccggcggggttggggatctgggggagttgctgcggtggacgcgggaggtcgccgcgaatcccgtggcggcgcggcctgttccggcggaggtcaaggcgaggaagcggcaggtgctggccttacggcgcgctcgctacctcaggatggaggacgttgcgaacgcggacgagctacccagcttcttcaagaaaaggaagtacagatctcacaataaccatgcagaaagacaaaaaggtaaaggttcgatgaatatgccaacaaggaaatcagagaggctagctaagagaatgaaactcatgacatcagtgctcctcacacaaaggaaaaagattggagttggtgagcattttcaggcagaggtacctgactggactgaaccaccttcagatgaacttgctcgttacaaaaatgacccaaacatctcaaagatgctaggaaccagaatttggccacctgaaggtcaagttctacaaactgataaaaaaatagctggccagggaaggatggaatcatgtaactgttcatacccgggatccttcttctgcagacagcatcacacagatgcagccagagatcagctaaggtgtgaactcggtagagctttcacagaatggcgatttgattcaatgggtgaggaggtttctaaaatgtggactcgtgaggagcaactaaagtttaatgcacttgagaggttggtccctgtgatggaccataagactttttgggcggtagcatcaaaacatcttgcctcaaagaccaggatagagttggtgcgttattacttgaacgttttcttgatgagaagagtattgagccaatgcagattaaatcttttggagattgatagtgatgaagatgaaacagaggaagaggaggatgaagatcaatctgaaagcaccagtacttcccagaggacccagcatgcccagaatgtgaagagcatttcatga</cdnaseq>

Protein Sequence

<aaseq>MVGMYQQQLVEDPFPLSGGYCSDQPRHAPASASTSTSTSSSAAV AASPLAQAHGAGEPRRLFEAFMGEILLPLRGEGGANGGGVGRGPGGVGDLGELLRWTR EVAANPVAARPVPAEVKARKRQVLALRRARYLRMEDVANADELPSFFKKRKYRSHNNH AERQKGKGSMNMPTRKSERLAKRMKLMTSVLLTQRKKIGVGEHFQAEVPDWTEPPSDE LARYKNDPNISKMLGTRIWPPEGQVLQTDKKIAGQGRMESCNCSYPGSFFCRQHHTDA ARDQLRCELGRAFTEWRFDSMGEEVSKMWTREEQLKFNALERLVPVMDHKTFWAVASK HLASKTRIELVRYYLNVFLMRRVLSQCRLNLLEIDSDEDETEEEEDEDQSESTSTSQR TQHAQNVKSIS</aaseq>

Gene Sequence

<dnaseqindica>4647..4683#3735..4459#137..586#aaattttacgagttacagctaataaaccgcggtctccatcctcgcaggcgcaggcgggagcagcaagctgggggcgcgcggcgaggcggctgctacacccgccgccgccgcggccggccgcggcgacctcgccccgatggtcgggatgtaccagcagcagctcgtcgaagatcccttccccctgagcggcggctactgcagtgaccagccacggcacgcgcccgcctccgcctccacctccacctccacatcctcgtcagctgccgttgcagcctcgccgctggcgcaggcgcatggagccggcgagccacggcggctgttcgaggcgttcatgggggagatcctgctcccgctccgcggcgagggaggtgccaacggcggcggcgtcggccgcggtcccggcggggttggggatctgggggagttgctgcggtggacgcgggaggtcgccgcgaatcccgtggcggcgcggcctgttccggcggaggtcaaggcgaggaagcggcaggtgctggccttacggcgcgctcgctacctcaggatggaggacgttgcgaacgcggacgagctacccagcttcttcaaggtgagctcctttactcaatttccgatctgttgcccatatattgcgcgtctggcctcttgcttgatacgcgcccgttggtgtttgctgctgcatctaggattttgtcactttgtgttgttccctttcgtaccattaggtttggctttctggatgtgcttttgtgtctggactctggagtcgcagcctcgcaatggccgcgtgttgacaattgaccggtcctgccctgttcatagaatctgtcactggcattacaatagaataaaatcacagcctgcataaacacacatgtactgtttacttttactaacaatagaagattctaatccggaaggggaatcctgacttaaaacatgcgattatctcagcgagatcttctaattgaagggagcttttattggaactgcatgttgtggaaattaggcacagtgtgacctactacaatatatttccacatgacggtgtcacataatgcagtaccagttagaaaactgttgcctgcattcatgaaccatgatggttccatcagacactgtttttcctagatgaccgataggacctttgtttttataccttcaagtctaacaacggaaaacattctgctacatgaccgatgtctatttgctcaatgcacggcatagaaagcttcttagtcaacattgtatttgtgaaataattgatcactaaacatatctgcaaattatgttgaggtaaaacatgaaacatcgcggacaaattggaatgactcttagttaagatgccaatgacgttggtcattggatctgtataaatccagtctacatatggagtaacagtatgattttactggcagtgataagcggtgttttaaatttctttttctttgtttagttagtttcttttgtttcaattttttggtagagccttctcttgtgttgcgataaagttaccacattctgagacttccttctcttctttaatgaaatcagtggcgctctagcctctcctctttttgacaaaggactttacccacttgactagagccaccaggagtaatactgtagaaaactgcactaaacattaagagaaagctagatcagacatagaacaagaaaattatattagcaagattttctttcttgacacacccttttacaaaggtctacatattgggggttcaataagaaaagtatttacatagacagacataattgtagatccattggcagcagcttatgatatgtgtcatgtatagccaattttaacaaaccctcattacattactgatgtgagattgctttatgtaaaataattgtatccccctctttgttattgtaaataaaaactatatttctggaatctggacatggttgcatagtgtaaatcgtggttgcaatgtgttgacattatggaatatataaaaaccatcaatgatctctactcatatctttcatggataatcatactggtaattggaaccctagagttgtaacatatactatcacattgtctattttcatgtagagctggtgaaaaggctgtcacagcctcataatttagtcccagaagaatcatttttatagtcgttccagaattgatctgaaacctcgacccagaaaaagctttggtctgaagctgaaaaaccatatatgaccagcacaggtgccatagtgtggtaaaggaactcagataagtgccagtatggcgtgtttatatgtggagagaagcaggaactgcagttcacacacatgtcctgtgcttgaggttgatgtttatctagatgccaatgacagtgtaacagcctacaagcagagtggtacttaagggtgatagataataatctttggcagatcctaaatttattagctatgggttttgttgttggaaattcaagtataatattgtcattttcttgttaaaatccttgtggttctggatttttgttatgttaccaataacactccagtgggctcattttgaagtcccatttgtgcacatgccttcattactgatcgttagataaaatatctgaaggagatttttattagtttgaaatgttatataagaattgagaatgttttgggtaatgttttattggtagtatgtttacgcagtattggtagaaacaaatatttgccatggaaatcctcactaattgtttgctatccagagaattccaggactgacgaaacgttttcttgatagtgacttgattaagttgatgtttaatactcattttaactgttctgttgtctataactattgagtcattttaatttactatctttcgaagcataacttaatgtgcataggagcaagctgatgtattctttgaaaataacagcatatgacatagactaaacccagggcatagttttgctgtggtatgcaatcttgttagtaggagttcttaccgatttgaggaatataatgcgattgcatcaaaaaagaaatggttcgaagcatttatgatatcccatcagtcggaaaatcaaacgctatgatgagatactacctgttcaccagaattacttcttttctgggtggtatgtatatggtggtgtgttgctttaggaaaagtggctcttcactcttattcttttattatgaatcttgtgttctgcatgcctaaaccttatgtggtatgcaatggcaatgctagtttcataaattggatgcatgtatacctctgagacgttgcaaggatttgctcttttgtcaaagatgctcaagcagtagtcttctatcatgcagcagcattacccccgtggtgttctctatcagtaaacatatcactgcaatttcagactccacagtgaacatggataccactgagtcatgattatttcatttgtttcatctaataagggcatgaggactccgtgtaaaataagttggaaatgttcaaataaaagtggtgaacaattgtttcctatctacatggcaaattttacttctaagtactacgaaaaccctgagttaagtttgtggaatttcccccctatctcagaagtttgtcgatgtttgataactttgctttagtacttttcagtttgtttgccagattatgattatttttatttttcatgtcagctgctactgtgcattatactgcggaaaacaatttccttttcttactattttagagcttcctgtgttttcaatcttgcagaaaaggaagtacagatctcacaataaccatgcagaaagacaaaaaggtaaaggttcgatgaatatgccaacaaggaaatcagagaggctagctaagagaatgaaactcatgacatcagtgctcctcacacaaaggaaaaagattggagttggtgagcattttcaggcagaggtacctgactggactgaaccaccttcagatgaacttgctcgttacaaaaatgacccaaacatctcaaagatgctaggaaccagaatttggccacctgaaggtcaagttctacaaactgataaaaaaatagctggccagggaaggatggaatcatgtaactgttcatacccgggatccttcttctgcagacagcatcacacagatgcagccagagatcagctaaggtgtgaactcggtagagctttcacagaatggcgatttgattcaatgggtgaggaggtttctaaaatgtggactcgtgaggagcaactaaagtttaatgcacttgagaggttggtccctgtgatggaccataagactttttgggcggtagcatcaaaacatcttgcctcaaagaccaggatagagttggtgcgttattacttgaacgttttcttgatgagaagagtattgagccaatgcagattaaatcttttggagattgatagtgatgaagatgaaacagaggaagaggaggatgaagatcaatctgaaagcaccagtacttcccagaggtattgtttacatttcctggaatggcccacatatatttttgtagatggttataatctgaatgcgctgatgattgagctacgcattggtcatttctatgagagtaggataaccaattcacttcaaacatacgcgtattctctggtactattgatgatgacttctgctaactcttttattttactccaggacccagcatgcccagaatgtgaagagcatttcatgaaatggctgacagctacctgtccacattcttttttgcatgtgcacttgttttgtctatgtggagagtgacctcaatcgatttgtcatttctccatgtggtcattagtctgatcttggaagatatttggataaagtgagtcgttcactttgctagaacacatccattctgcagagaaacttatttgaatggcagaccattctcaatgtctgtctcaagacaatccattcggttgtaactcgaagattatctgatctgaattgtttcccattgtacaggaaaagaaaaggaaaagtagattgggggaaagaaaacaaatggtctggaacatttcttattattgagacttggaagggccaatgtgtcgcctttagcaagcttttttggcaatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0852500, RefSeq:Os01g0852500