Os10g0518300

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Revision as of 08:45, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0518300| Description = Protein prenyltransferase domain containing protein| Version = NM_001071609.1 GI:115482961 GeneID:4349128| Length = ...")
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Gene Name

Os10g0518300

Description

Protein prenyltransferase domain containing protein

Version

NM_001071609.1 GI:115482961 GeneID:4349128

Length

5605 bp

Definition

Oryza sativa Japonica Group Os10g0518300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:20486878..20492482

Sequence Coding Region

20487030..20487295,20487867..20487989,20488099..20488168,20488285..20488395,20488663..20488746
,20489644..20489694,20490283..20490312,20490441..20490503,20490603..20490668
,20490808..20490924,20491018..20491053,20491377..20491496,20491627..20491797
,20492017..20492127

Expression

GEO Profiles:Os10g0518300

Genome Context

<gbrowseImage1> name=NC_008403:20486878..20492482 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:20486878..20492482 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaagagcccgcgcaggtgaggacggcgcggggcggcgcggcggatggggtggaggtgggggtggaggaggaggaggagccgccgcgatcggcgacggtgaagcaggaggaggcgaacgcggtgctcggggcggaggggtcccgcccgttcgccatgcgggagctcaaggaggaccacgaggtcgcggccgggagcggcgtgaaggcggcgtctggggagaggaacgggatcggatcggcggatgcccagggttcgtcgtacagccaagagagtatgcagcagttttcatcccatcatgatgttgcaatggacttaataaatagtgtcactggagttgacgaggaaggccgttctcgccagaggattctttcttttgctgccaaaagatacataagcgcaatagaaagaaatcatgatgaccctgatgcatattataattgggcccttgttctccaggagagtgcagacaatgtagatccaaattctagttcgtccaaagatgcattgcttgaggaggcttgcaaaaagtatgctgaagctacccgtctttgcccaactctttatgatgcatattataactgggctattgctattgctgatcgggctaaaatgcgaggtcgtactaaagaagctgaagagctctggaagcaggcaatactgaattatgagaaggctgtccagctaaattggaatagtccgcaggctcttaataattggggtcttggactacaggaactgagtgcaattgttccggctcgtgagaagcaaaccatcataaaaacagctataagtaagtttcgagctgcaattcaactgcaatttgatttccatcgggcaatatacaatcttgggacagtcttgtatggtttagctgaggatacaatgaggtctgggaagccaggtgtgtccgctagcgagttttacagtcagtctgctatctatgttgcagctgcccatgcactgaagccaaattactcggtctaccgcagtgctttgcgattagtccgttcaatgctgcctttgccatatctcaaagtgggatatttgattgctcctccagaaaatagtgccattgcaccacacaaagaatgggagaggtcacagtttgttttgaaccatgaagaactccagcaggtcaatgcctctgaccagcctccatcacaatcacctgggcatgtggacagcggcagaaagcttttcaggatagttgttgcagacattgtttctgtgtcagcatgcgctgatctaaccctgccacccggtgctggccttcgcatcgatactattcatggccctagattcttggttgctgataactgggagaccattgacagttggctagacgctatacgcctagtctacaccatatttgcaagagggaggagtgatgtccttgctgggattattactggctga</cdnaseq>

Protein Sequence

<aaseq>MKEPAQVRTARGGAADGVEVGVEEEEEPPRSATVKQEEANAVLG AEGSRPFAMRELKEDHEVAAGSGVKAASGERNGIGSADAQGSSYSQESMQQFSSHHDV AMDLINSVTGVDEEGRSRQRILSFAAKRYISAIERNHDDPDAYYNWALVLQESADNVD PNSSSSKDALLEEACKKYAEATRLCPTLYDAYYNWAIAIADRAKMRGRTKEAEELWKQ AILNYEKAVQLNWNSPQALNNWGLGLQELSAIVPAREKQTIIKTAISKFRAAIQLQFD FHRAIYNLGTVLYGLAEDTMRSGKPGVSASEFYSQSAIYVAAAHALKPNYSVYRSALR LVRSMLPLPYLKVGYLIAPPENSAIAPHKEWERSQFVLNHEELQQVNASDQPPSQSPG HVDSGRKLFRIVVADIVSVSACADLTLPPGAGLRIDTIHGPRFLVADNWETIDSWLDA IRLVYTIFARGRSDVLAGIITG</aaseq>

Gene Sequence

<dnaseqindica>153..418#990..1112#1222..1291#1408..1518#1786..1869#2767..2817#3406..3435#3564..3626#3726..3791#3931..4047#4141..4176#4500..4619#4750..4920#5140..5250#atttgatttttttgccaagtccaacgtcgcgcgaggcgaggcgaggcgaggcgagaggaggagtggagaccaccgccgccgcggcgcgcgcgcgctcggagatctcgccgcggtagcgcagcgcgggtgccgtgccctgatccgtccgtgcgatgaaagagcccgcgcaggtgaggacggcgcggggcggcgcggcggatggggtggaggtgggggtggaggaggaggaggagccgccgcgatcggcgacggtgaagcaggaggaggcgaacgcggtgctcggggcggaggggtcccgcccgttcgccatgcgggagctcaaggaggaccacgaggtcgcggccgggagcggcgtgaaggcggcgtctggggagaggaacgggatcggatcggcggatgcccagggttcgtcgtacaggttcgtggagatgcagtccattcagatctcacgacatgtaccgtatcagttcgatttagtcgtgtttgcgttgagtgttaattgctctgttgcctgcagagttttattcgatgtttaactattgctttagttagaattccaccaccatagttgagttaatctcatcaatgtgaattgtgatgctgatacttatgatagttgttgtattggaatgattagctgcaacatgcaagcctgcaaccataattctttgttttgatgagaattgtttgtcaagtatcagtggtcatagttgagcaaagcaaaattaccgccctagcaaatctagcagacctctcacctagtcgaccttcttttaggttagttttactgctagataaggatatataaaagccacttttcgtgccactgtacattgctttgcaatatcatgggtaattcttaaacattgtggaatgtttaattccattcttaaacatcatgggtaaaatattgtgttatgtacaacatatagtgcatgtctatcccattctccgtacacattgatgagactgtctcgaatttatttcagccaagagagtatgcagcagttttcatcccatcatgatgttgcaatggacttaataaatagtgtcactggagttgacgaggaaggccgttctcgccagaggattctttcttttgctgccaaaaggttgtgttatctttcctgaatatcctttctcttgctattatcttacactttaaatgtccttcatctgtaattacttgttctgtcaagtcttataaaatctttcatgcagatacataagcgcaatagaaagaaatcatgatgaccctgatgcatattataattgggcccttgttctccaggtacatctgcattcttcttaagttatgtgatgtgccagttattgtgttgtactgttgttaatacttaactgtgaccaatgtatgattgataatattctctcaaaatattgattcaggagagtgcagacaatgtagatccaaattctagttcgtccaaagatgcattgcttgaggaggcttgcaaaaagtatgctgaagctacccgtctttgcccaactctttatgatgtaagtttttgttcctcacatttgtttgatttgaagaatttgaattgataagagaattttctgagttggtcttgtccaagaaaagatgagaagagacatggccattttttaccaccaatactctatcaaaagcatttagaattgtagatcatcccgcagaatgtaatctatggttctggtggataaaaagtgctctcatttgctgtatattagatgtccatatttgactattttgtacttatttcaagcacccatttccccttttaggcatattataactgggctattgctattgctgatcgggctaaaatgcgaggtcgtactaaagaagctgaagagctctggaagcaggtttacttacaagcctcacacatgtacatgctttgttaaaatgtttatgctatatatcttgttgctccctgttatcagtataatgtttattcatctagtgaaattccattgattgcaatttgcattatttaaatgatcaacattgtgcaattttcctttcagttatcaagttaaaattctatatgataatattttttagttatactaataagttggttgcttccttcatatatctcgatggcagtgtaagccacaactttctcaatagccaattgggtagtaagcggcataaaactcataatggcacttcgtgatgacattaattcttgcggtttactgtaagctatgctgacacaatgtgatcatcatatttgaggcttatttttatctgtctttttctatactaaacttagccagtttgcctttgatatttggggcaaaatcaacctagcatattcttaaaaaaagttctgtgtatctcttaataccgctgtttggtttcgaacatattctaacgaaacaaactgtattggtggaaataggaattgattcctactgcaaattttgatggtgattttccaaatctaccttgtccagatagtcttggaatgggttgttctaatgatccatcactttattgaagcatatatgctgccctgagacttgtttttttttcggttatgtgcttgtaaatggaaaccggaatcacacttctagttttgcatagactaacttttgtcatcactcatctataacaaatgatacctatttttttctactaggttttactgagtcataaggtgatctttttctttacaaggaatacactgtcatactgtttaaagtttataatgaagtttgatgccacgtgttatgtatggttccattccattgcaggcaatactgaattatgagaaggctgtccagctaaattggaatagtccgcaggtcagaacctagatcctttttccttatcttcaggactttacaacataagaaaaaaaaagagaagatatgaaatgtttgcctttttgtgaagaagaaacattcttatttgatttaagtggaagaaattcacgtcaatgcaattaatgaaatgggaaggttcaaaaaaatatggagttgtgccataccataaaaatgctatcatatgggttgtagaatgtagagaaccgtttgtagaggccttacctttacatttagaatacatttttttaatctaaatcctaatatgccctttaaggaaaaaaggcctcactgaatgttcattcttccatcaaatggtccaaaagaagaaattttaaaattacatccactgagaaaccaaaacttgatatacctcaatcgtaatactgtacaattcatgtcacttccttttaaccattctcttcattcttcattttgggcaaagctatgagttgaacattgacagatcatatcaacttggattttctttccacacactccccctattttcagttctcacttgagaacccatgccattgttgcttatattagttatatctttgattacaggctcttaataattggggtcttggactacaggtaatcccacatttgacttcttgttattgtagccttctcaatctgggatattccttagctctctgctcttgagctatatttgctatgctgtattttttttcagctaggagtatgaatttgtattgcaggaactgagtgcaattgttccggctcgtgagaagcaaaccatcataaaaacagctataagtaaggtagatgcaatttctattactgtgcgagaatcatttttgatgattgtatcttctataaactattgggctgttgacgccccccttctgatgtcttggcagtttcgagctgcaattcaactgcaatttgatttccatcgggcaatatacaatcttgggacagtcttggtatgattcctgacttccattactcacctagcaataatctattgttttaatgtagctgcagtgacttgtgaaaaccttagctgattaagttttatgataataacaagaatctgtcttcttgtcttattaaatgtctcagtatggtttagctgaggatacaatgaggtctgggaagccaggtgtgtccgctagcgagttttacagtcagtctgctatctatgttgcagctgcccatgcactgaagccaaattactcggtatttctttttgtcttttaattttctaatttatgtatgggacttcttcataaaaactttatagctgacaatgtccctttttgtataattcaggtctaccgcagtgctttgcgattagtccgttcaatggtaagacactaattttatttcttgacaaactcttaatttattgtttatttttatcagttgttagccagcagtagttaagatatggctagaatatgtttatttcttaatttattatcttagaattcacttatctttttttttgttaagtcgtttttatgtggaagataaaagatgaatagacataggactttgaacctgtcaaatttttactctgctgttctttagttttgagtatacattgttatttcagtacatggcttcttatcttatttcttgatatggcagaagtaaccttgttcttgctgtcattctatgtcatgcagctgcctttgccatatctcaaagtgggatatttgattgctcctccagaaaatagtgccattgcaccacacaaagaatgggagaggtcacagtttgttttgaaccatgaagaactccagcaggtagttctgccactgttctttgtgcacttgctttagatgataatattgtccattttgaagttactgctgtctgtaattgttctttgtcattatcgtgcctgctcaaactgctatgtgttgtaaattgtaggtcaatgcctctgaccagcctccatcacaatcacctgggcatgtggacagcggcagaaagcttttcaggatagttgttgcagacattgtttctgtgtcagcatgcgctgatctaaccctgccacccggtgctggccttcgcatcgatactattcatggccctagattcttggtatgcatttcaatttgcaattgttcatttgttctatcgaaatggattacagatgttttcctttatctacaaatggactattttctctgctttccttgtaaaatggataactacaactctatgcctataatgtcctcagctatcattatcaagttagtgacaaacaactgagtatatagtttcgagtgcataacaaatgttttgttgtgcttgtggcaggttgctgataactgggagaccattgacagttggctagacgctatacgcctagtctacaccatatttgcaagagggaggagtgatgtccttgctgggattattactggctgatggctcgctgctagtgaaaaactgccaacaagtataggccaagagactgtaggagtatgtcccggaatcagatagaagtatcatagaactcatggttttagtaggcgtaagagcagatgttatttgtaacccatttatggactggtaggtcataggccaattttcctttgtactgtggcgttgtgtcgtcatggtacatatgatgtgatataagaaataaaaaccgtaatatcctctctagcctgtgaataaagatgcaacggcttgtggcaggcgagtaggttgtgtgaactgctgtcctatctccctctcaaagaaggaataaaatgtttcccctatctgtttttcagccttc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0518300, RefSeq:Os10g0518300