Os01g0855600

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Revision as of 05:11, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0855600| Description = Similar to Hs1pro-1 protein| Version = NM_001051377.1 GI:115441124 GeneID:4324829| Length = 1870 bp| Definition = O...")
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Gene Name

Os01g0855600

Description

Similar to Hs1pro-1 protein

Version

NM_001051377.1 GI:115441124 GeneID:4324829

Length

1870 bp

Definition

Oryza sativa Japonica Group Os01g0855600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:38698563..38700432

Sequence Coding Region

38698892..38700316

Expression

GEO Profiles:Os01g0855600

Genome Context

<gbrowseImage1> name=NC_008394:38698563..38700432 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:38698563..38700432 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaacgcccaagctgtcccctgtatcgccggtgcggccggaagataagcagcgcgcgtcctcctcgtcgtcgtcgggggcggtggctgcgcctctgagggtgcaggacgatacggcggtcgaggagtacgagcagtacctgcggcttccggagctcgcaaggctgtggaaggataggtgctgtccggagtgggccgacgagggcctcgtcaagccggcgctgcaggcgctggagatcaccttccgcttcatctccgtcgcgctctccgacccgcggggctacgccagccgccgcgagctcgcgcggcggctggaggcgctcgcggcaagggaggtggagctggtggccgcgctctgcgagggcgagcagtgcccgccgctggccgagctgagcgcgtccaaaggcgtgctcccgcgggagcggagcgcgtctgaggtgtggaagattcccggtagcgccgccgcggtggtgtgccaggtcagcgaggccagcctgctcccgcggctcgccgcttgggacaagtccgagaccgtggcggccaggatcaagtacgccatcgagagccagatgcagggctgcgtgttcaccctcggcctcggcgagcccaacctcgccggcaagccggtgctcgagtacgaccgcgtcgtgaggccgcacgagctgcacgccctcaaggcgaagatcgcgccggagcccaagaccggctaccgcaacaaggagaacgaggcgctgttcactatccaccagatactcgagtcctggctgtgcgcggcctcacagcttctcacccgcctaaacaaccggatcgaagcaagaaactgggaggccgcggcgagcgactgctggatcctggaacgcgtctggaagctgctcgccgacgtcgaggacctgcacctgctgatggacccggacgacttcctgcggctcaagagccagctcgcaatacgggcggcaccgggctccgacgcgtcctcctgcttccgctccagggcgctgctgcacgtcgctaacgccacgagggacctcaagaagcgtgtgccatgtgtgcttggcgtcgaggtggaccccaacggcgggccgagggtgcaggaggcagccatgaggctgttccacagccggcggcgcggcgagggcgaggaggccggcaaggtggagctgctgcaggcgttccaggccgtggaggcggcggtgaggaggttcttcttcgcgtaccggcagctcgtggcggcggtgatgggcaccgcggagtcgtcgaccaaccgcgcgctgttctcgccggcggaggagatggaccccctggcgcagatgttcctcgagccgccctacttccccagcctcgacgccgccaagacgttcttggccgactactgggtacggcggatggccggtgacggtgactctgcttcgtccaggcgaagctga</cdnaseq>

Protein Sequence

<aaseq>MATPKLSPVSPVRPEDKQRASSSSSSGAVAAPLRVQDDTAVEEY EQYLRLPELARLWKDRCCPEWADEGLVKPALQALEITFRFISVALSDPRGYASRRELA RRLEALAAREVELVAALCEGEQCPPLAELSASKGVLPRERSASEVWKIPGSAAAVVCQ VSEASLLPRLAAWDKSETVAARIKYAIESQMQGCVFTLGLGEPNLAGKPVLEYDRVVR PHELHALKAKIAPEPKTGYRNKENEALFTIHQILESWLCAASQLLTRLNNRIEARNWE AAASDCWILERVWKLLADVEDLHLLMDPDDFLRLKSQLAIRAAPGSDASSCFRSRALL HVANATRDLKKRVPCVLGVEVDPNGGPRVQEAAMRLFHSRRRGEGEEAGKVELLQAFQ AVEAAVRRFFFAYRQLVAAVMGTAESSTNRALFSPAEEMDPLAQMFLEPPYFPSLDAA KTFLADYWVRRMAGDGDSASSRRS</aaseq>

Gene Sequence

<dnaseqindica>117..1541#aaactcaaagacaagcgaggattagcgatcgataactggagggagtatacagttggaaaattcaaactagacgctgatcatatcgagggagagttcaactcaactggagcgcggagatggcaacgcccaagctgtcccctgtatcgccggtgcggccggaagataagcagcgcgcgtcctcctcgtcgtcgtcgggggcggtggctgcgcctctgagggtgcaggacgatacggcggtcgaggagtacgagcagtacctgcggcttccggagctcgcaaggctgtggaaggataggtgctgtccggagtgggccgacgagggcctcgtcaagccggcgctgcaggcgctggagatcaccttccgcttcatctccgtcgcgctctccgacccgcggggctacgccagccgccgcgagctcgcgcggcggctggaggcgctcgcggcaagggaggtggagctggtggccgcgctctgcgagggcgagcagtgcccgccgctggccgagctgagcgcgtccaaaggcgtgctcccgcgggagcggagcgcgtctgaggtgtggaagattcccggtagcgccgccgcggtggtgtgccaggtcagcgaggccagcctgctcccgcggctcgccgcttgggacaagtccgagaccgtggcggccaggatcaagtacgccatcgagagccagatgcagggctgcgtgttcaccctcggcctcggcgagcccaacctcgccggcaagccggtgctcgagtacgaccgcgtcgtgaggccgcacgagctgcacgccctcaaggcgaagatcgcgccggagcccaagaccggctaccgcaacaaggagaacgaggcgctgttcactatccaccagatactcgagtcctggctgtgcgcggcctcacagcttctcacccgcctaaacaaccggatcgaagcaagaaactgggaggccgcggcgagcgactgctggatcctggaacgcgtctggaagctgctcgccgacgtcgaggacctgcacctgctgatggacccggacgacttcctgcggctcaagagccagctcgcaatacgggcggcaccgggctccgacgcgtcctcctgcttccgctccagggcgctgctgcacgtcgctaacgccacgagggacctcaagaagcgtgtgccatgtgtgcttggcgtcgaggtggaccccaacggcgggccgagggtgcaggaggcagccatgaggctgttccacagccggcggcgcggcgagggcgaggaggccggcaaggtggagctgctgcaggcgttccaggccgtggaggcggcggtgaggaggttcttcttcgcgtaccggcagctcgtggcggcggtgatgggcaccgcggagtcgtcgaccaaccgcgcgctgttctcgccggcggaggagatggaccccctggcgcagatgttcctcgagccgccctacttccccagcctcgacgccgccaagacgttcttggccgactactgggtacggcggatggccggtgacggtgactctgcttcgtccaggcgaagctgagcggcggaaatagtggcggatggatgccgccggaccctgaattttgcagtctttcaaggttgatgatacatttaatacatttatgatttatttctgtagggtagtggtcgcgttcatctttcagttcgagtaaatgttttattgggagacattttggtttagatttgattactagatggtaacgggaaaatgatctaggatcatatatttcaattagagtactgatgatgtatataatgctctgtaaatatgtttcaatggattatgtgtccgatattgataatgtttgatgtactacgaattgtttcaaaggaaaaattatttcctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0855600, RefSeq:Os01g0855600