Os01g0856000

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Revision as of 05:11, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0856000| Description = Similar to CDC6 protein| Version = NM_001051380.1 GI:115441130 GeneID:4324832| Length = 4655 bp| Definition = Oryza...")
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Gene Name

Os01g0856000

Description

Similar to CDC6 protein

Version

NM_001051380.1 GI:115441130 GeneID:4324832

Length

4655 bp

Definition

Oryza sativa Japonica Group Os01g0856000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:38707920..38712574

Sequence Coding Region

38708986..38709110,38709189..38709414,38709495..38709569,38709645..38709751,38709852..38709958
,38710051..38710110,38710204..38710277,38710376..38710426,38710597..38710646
,38710749..38710809,38711288..38711377,38711463..38711528,38711627..38711722
,38711807..38711896,38711989..38712033

Expression

GEO Profiles:Os01g0856000

Genome Context

<gbrowseImage1> name=NC_008394:38707920..38712574 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:38707920..38712574 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggagcaattgctcgatcttgcaggttggcaccccgaagctgctctcggcgtcgcccaggtcatctaggaagcggctttacggcgacttcgtcgcggccgagaagcccaagtggaatcctcgagatcccgctcagatgcaggtggtcaaggaggcgcttcacgtggctacggtgccctcttgcggattggtctgccgagatgatgagcagagtcgcgtgcttgagttctgcaagggttgcgtggagcaggagcgttcagggagcctgtatgtgtgcgggtgccctggtacagggaagaccttgtcgattaacaaggttaaggagagcgtggcgcgttgggcagacgagaccggaatggagacacctgatgccttatcgatcaattgtacaagcctagcaaagacgcatgaaatttttagtaagatacttgcgaagtttcagactcggaagaaggcaacctgcaaactgtcaccacttcagcaacttcaaaccatgttttcccacaaggaatcagccccaagaaggatgttgttggtcgttgtggatgagatggactacttaataacaagagaccgggctgtgctacatgatcttttcatgcttacgacttaccaattctcaagatgcatactgataggtattgcaaatgctatagacctagcggatcggtttcttccaaagcttgagtccttaaattgcaaaccacttgttgtgactttccgtgcttattccaaggatcaaatatctgacataattaagcataggctgaaggttctcgagtatgatgtttttgaaccactggcccttgaattttgtgctaggaaagtcgctgcagcctctggagacatgagaaaagctcttggtgtttgcaggagcgctgtagaggtttttgaagcaaggttacaagagtcttctgatcaagaatttggacttgtgacatttgaccacatggacattgctttgtcaaaggctttcaagtcacctgtagtagatagcattctctgtcttccccaacatcagcagatggtattgtgtgcattggcaaatacttttcatcattgcaagaaaaaggcaacgactctaggagagctcaataaatcatacatagaaatttgtagatcaacccaagtcccagcagttggaatgcttgaattttcaaacatgtgcatggttttgagtgatcagggattcatgaagcttgggcaatccaaagaagataagctcaggagagtgatgcttcaaattgacagttcagatatcacttttgcatttaagggtaaccggttctttcagaaatgtttggagcaacaaaaattttag</cdnaseq>

Protein Sequence

<aaseq>MRSNCSILQVGTPKLLSASPRSSRKRLYGDFVAAEKPKWNPRDP AQMQVVKEALHVATVPSCGLVCRDDEQSRVLEFCKGCVEQERSGSLYVCGCPGTGKTL SINKVKESVARWADETGMETPDALSINCTSLAKTHEIFSKILAKFQTRKKATCKLSPL QQLQTMFSHKESAPRRMLLVVVDEMDYLITRDRAVLHDLFMLTTYQFSRCILIGIANA IDLADRFLPKLESLNCKPLVVTFRAYSKDQISDIIKHRLKVLEYDVFEPLALEFCARK VAAASGDMRKALGVCRSAVEVFEARLQESSDQEFGLVTFDHMDIALSKAFKSPVVDSI LCLPQHQQMVLCALANTFHHCKKKATTLGELNKSYIEICRSTQVPAVGMLEFSNMCMV LSDQGFMKLGQSKEDKLRRVMLQIDSSDITFAFKGNRFFQKCLEQQKF</aaseq>

Gene Sequence

<dnaseqindica>1067..1191#1270..1495#1576..1650#1726..1832#1933..2039#2132..2191#2285..2358#2457..2507#2678..2727#2830..2890#3369..3458#3544..3609#3708..3803#3888..3977#4070..4114#caatctcattgcttcaatcaattgtaatattgttttaatcataggagaactaattatatgtattacagatgaagatgataatatgacttacttatttggagtctctgttgttgttggggtacctcgatcttcagaattatccagtgaagacatttctttaactcagatcttgcttgcatatactttggcctcttgaaactctcgatcaagagatggcatcagaccctttggagagaaaggtgaaaactgatttctataggtttctatcctctaaaatgaatgggtgaaattggcgccaagttatctgcttgccgcgcgccatttctctcgcgtcagaaggttgcaacgcctatattgccacaccagccgattggttagtgggctgaaatggacttgcaggcctggtatttggatccttctaaatcctaatcgtccaaagaaaaggaacgatcaggatttgccaacggcatggccgtgccgttatagttacgacggcagacgtgccgttatagttacgacggcagacgatgcgcttccgggggacccatacccgcgaagcattaagcggtccccaaaattttcaacgcgccctttcacactttcgtgtcgttcccgcgcgagggtgggaaaccctttggcgggcttggctctcgcgccactctccaccaccgcgccctttttcttgtcgcccacctctcgccccatcccccacaaacaattcctccccaatttccctcccaaatctctcccgcctccgatcccacagtctctctctctctctctctctctctctctcgatgccgacgcttcgcagcgccacagcgagcgcgtcaacggcgggcacggcctcgccgacggcaatcgccaccccacgaagcgccaagcggcgcctcacgagccctcgccgagccgcagggtcacccgacgcgtctcagttcacatccccccacaaatcccccaatgtcggaatcgtaagtcccccacctcccctcgatctctagtgcaggactatgcagatgctggcgtgctgctgctgctgctgcatattacctggtattctgttgcaatgaggagcaattgctcgatcttgcaggttggcaccccgaagctgctctcggcgtcgcccaggtcatctaggaagcggctttacggcgacttcgtcgcggccgagaagcccaagtggaatcctcgaggcaagtctccagaatcccatttcagtagggctcagagttctgattgggatctgacgaaagaattcatctgttctgcagatcccgctcagatgcaggtggtcaaggaggcgcttcacgtggctacggtgccctcttgcggattggtctgccgagatgatgagcagagtcgcgtgcttgagttctgcaagggttgcgtggagcaggagcgttcagggagcctgtatgtgtgcgggtgccctggtacagggaagaccttgtcgattaacaaggttaaggagagcgtggcgcgttgggcagacgaggtaaattcaatttctcatggttctgtaagattcctgaaataggagtgtgtagttgttgatatggttgtttgtcctcgtagaccggaatggagacacctgatgccttatcgatcaattgtacaagcctagcaaagacgcatgaaatttttagtaaggtatttactgttgcctaattattgactcgatatatctatgcaatgctgacaggcactgacaagttcttgatgcagatacttgcgaagtttcagactcggaagaaggcaacctgcaaactgtcaccacttcagcaacttcaaaccatgttttcccacaaggaatcagccccaagaaggatgttgtaaggactgcttgagcccagtacccatcctcacaacctggcctttttcgtgccatttagttcctggcatcacaattttcatattactgctcctctgtaggttggtcgttgtggatgagatggactacttaataacaagagaccgggctgtgctacatgatcttttcatgcttacgacttaccaattctcaagatgcatactgataggttagatgtcaaaggatgcttcttgtacttttgtaattatgttaatatcaaaatactgttttgccaatcgacaattggtgctattttttcaggtattgcaaatgctatagacctagcggatcggtttcttccaaagcttgagtccttaaattgtaagcatttaccaaatactagcaagaaaagtgttaacataaattgtatgaaagaaattaacatgtctttggcattataacactaatttacaggcaaaccacttgttgtgactttccgtgcttattccaaggatcaaatatctgacataattaagcataggctgaaggtaattcgtttatcatgtgaccaactgtggctcgtgcacatctgtgttcaattacttgacttaaataggttgcttaccttttgtgatactacacataggttctcgagtatgatgtttttgaaccactggcccttgaattttgtgctagggtaagtccaattactacccaagtactcatttgtagctagttcattttgaaatatgtcagttcacaaggcagcataggtattttttttgttaaggagaacatcatggtgcagttagcatgaaattgacgtgttcacttattaacaatgtttgcttaatattcttataccagaaagtcgctgcagcctctggagacatgagaaaagctcttggtgtttgcaggtaacccacttctcttgcagtgacaactattacgtttttgcactaacatgttgttccatcataaggtaagccagtccataacttaatttttatttattccaggagcgctgtagaggtttttgaagcaaggttacaagagtcttctgatcaagaatttggacttgtaagtcatgccgtcttttgatagcttttttttttcttttgagggaaatcatcttttgataggtaacatgtataaccaacaaagtggttcctgtaaaggaaatcacctttgttcatgtctacattgatgtaagtcaagttcacagtagttgcttcaactgtaaagcttccttgcggttgggtccatctgtgtctctttgcctgacttcttctggccggtagtcggtagaccactagaacatgattctagtgtagtacttaccaccaaacagaaatttgtatgtgcatgactgttgtactactaaacaagcgattgacagtgtatttcatgcttttagttgcctggatctaacgctggtcgccaaaataaatttatcttttgtttggatgatgaaacattgccacattgtatttctttcacaagatcagtaatttactttcctgttccagtgtcctgttgtctaatataagtattacaggtgacatttgaccacatggacattgctttgtcaaaggctttcaagtcacctgtagtagatagcattctctgtcttccccaacatcagcaggtaaattcagatttaccatctcctgttcccctcgattctttttccaaatttgctgtattcattttcctcgaatgacattccgcagatggtattgtgtgcattggcaaatacttttcatcattgcaagaaaaaggcaacgactctaggagaggtaatattcaatatttattcacagacattctgatagatcacgctcgttagccacatgttgtaatattctaaccaatctattttaatgcccttttgcagctcaataaatcatacatagaaatttgtagatcaacccaagtcccagcagttggaatgcttgaattttcaaacatgtgcatggttttgagtgatcaggtatgcaaacatgaagtaaggccaatccaaagaaatggaaagaaattcaaaacatatcaagtatttatggaatttacattgtagggattcatgaagcttgggcaatccaaagaagataagctcaggagagtgatgcttcaaattgacagttcagatatcacttttgcatttaaggtatggataaagtggttctgactattgtaaattcttcgcatcattgtatgttttgtttccagatgtactcattagcctaattcatactacagggtaaccggttctttcagaaatgtttggagcaacaaaaattttagttagtcactcaattcagcaacgacgtctatacacagtttgcattgtatcttataccaagtgccagcaaatcaaaagcaataatgcccaaaagttcaggtgaaattctatctctattactgtaccagtcactttcatactgcagcatgttatccaaaaaaacatttcatactgtaccagtcactttctcaagcatcgagactactacaactttatgaactatacttagatctttttccttgtttcaggattttgcattctattggatcaaaccaacgtaaattttgaccccgtcctcaatgtttatcaatatttatgatttatggcgaaaccctttgctgagaaaactgtacatgcgggatgagttatgattgtttttcttacagttcttctgaaagattcctaactgtatttgtaattctaaaaggtagttgattgtagttctgatttttccccctagtcttattttccttcaacacagtctacattgattatgatttaatccattgacataaaagataatttatgacggttgagatctgt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0856000, RefSeq:Os01g0856000