Os01g0857400

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Revision as of 05:11, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0857400| Description = Amino acid/polyamine transporter II family protein| Version = NM_001051388.1 GI:115441146 GeneID:4324757| Length = 6...")
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Gene Name

Os01g0857400

Description

Amino acid/polyamine transporter II family protein

Version

NM_001051388.1 GI:115441146 GeneID:4324757

Length

6394 bp

Definition

Oryza sativa Japonica Group Os01g0857400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:38799343..38805736

Sequence Coding Region

38799545..38800293,38800397..38800583,38800696..38800793,38802793..38803023,38805416..38805524

Expression

GEO Profiles:Os01g0857400

Genome Context

<gbrowseImage1> name=NC_008394:38799343..38805736 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:38799343..38805736 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggcgccgagcagggaggatgaggaggcgaagaagatggaggccggcggcgacaccgtcggccagaagctcgacgccggggctctcttcgtccttcagtccaaagggtcatggctgcactgcgggtaccacctgacgacgtccatcgtggcgccaccgctgctgagcctgccgttcgcgttcgcgtcgctggggtgggcggcggggctcatctgcctcgtcatcggcgccgccgtgaccttctactcgtacaacctcatctccctcgtcctcgagcaccacgcgcagcaaggacgccgccagctccgcttcagggacatggccaccgatattttagggcctggatggggacgcttctacatcgggccgatccagttcctggtctgcttcggggcagtcgtcgcgtgcactctcctagccggtcagagcatgaaggctatctacctgattgccaacccgggcggcacgatcaagctgtacgtgttcgtggcaatcttcggcgtcttcatgatgatcctggcgcagatgccgtcgttccactctctccgccacgttaacctcatctccctcgtgctgtgcctcgcctacagcttctgcgccgtcgccgcctgcatctaccttggaagctcaaagggagcgcccgagaaggactactcgatcgccggcgccaacacccgtgaccgcgtgttcggcgtgttcaacgccatcgccgtcatcgccacgacgtacggcaatggaatcatccccgagatacaggcgacggtggcggcgccggtgacggggaagatgttcaaggggctgtgcctgtgctacgccgtggtggtgacgacgttcttcagcgtggccatctcggggtactgggcgttcggcaaccagtcgcagggcacgctcctgagcaacttcatggtgggcggcagggccgtcatcccggagtggctgctgctcatcatcgagctcttcacgctgctgcagctgtcggcggtggccgtggtgtacctgcagccgaccaacgaggtcctggagggcctcctgtccgaccccaaggccgggcagtacgccgcgaggaacgtcgcgccgcgggtgctctcccgcaccgccgccgtcgcgctgggcaccaccatcgcggccatggtgcccttcttcggcgacatgaacgcgctcatcggcgcattcggcttcctcccgctcgacttcgctgtgccggcggtgttctacaacgtgacgttcaagccgtccaagaagggcgccgtgttctggctcaacaccaccatcgccgtcgtgttctccgcgctcgctgtcgtcgcgtcagtcgccgcggtccggcagatcattctggacgccaatagctataaactgttcgcgaacgtgtga</cdnaseq>

Protein Sequence

<aaseq>MGAPSREDEEAKKMEAGGDTVGQKLDAGALFVLQSKGSWLHCGY HLTTSIVAPPLLSLPFAFASLGWAAGLICLVIGAAVTFYSYNLISLVLEHHAQQGRRQ LRFRDMATDILGPGWGRFYIGPIQFLVCFGAVVACTLLAGQSMKAIYLIANPGGTIKL YVFVAIFGVFMMILAQMPSFHSLRHVNLISLVLCLAYSFCAVAACIYLGSSKGAPEKD YSIAGANTRDRVFGVFNAIAVIATTYGNGIIPEIQATVAAPVTGKMFKGLCLCYAVVV TTFFSVAISGYWAFGNQSQGTLLSNFMVGGRAVIPEWLLLIIELFTLLQLSAVAVVYL QPTNEVLEGLLSDPKAGQYAARNVAPRVLSRTAAVALGTTIAAMVPFFGDMNALIGAF GFLPLDFAVPAVFYNVTFKPSKKGAVFWLNTTIAVVFSALAVVASVAAVRQIILDANS YKLFANV</aaseq>

Gene Sequence

<dnaseqindica>5444..6192#5154..5340#4944..5041#2714..2944#213..321#agaagcgcaaaaggcaaaaccagagcccgctcacctgctgagaaacaccgcgcagaggcagagacaaacaacgtacggccgtgtagaactgtagatcgtatcgtccgagtcccccaagagtttcaggccatcaacccgtagtttggcgctcccttggttttacctgcaagacaaaagagctagcgaccgaatcgttcgacggcagaggcgtcatgggggcgccgagcagggaggatgaggaggcgaagaagatggaggccggcggcgacaccgtcggccagaagctcgacgccggggctctcttcgtccttcagtccaaaggtgcgttcgtgtctgacatgagctctcttgtttctcgcttactcgcttctgatcacccactattctttctttctttcgttatttctttcttgattcctctttggcgcatgtcaggcagcaagcatgtttggctagctgcacatataagcgtaacctgtttgtgttctgggagcatcggaggccgtatattctagactgttgatggattgtccccagctattaataagcaaaagagctggctaactaatcagtagcaactagccaactaacatgtacgagttaatagattgttctggctgctatatcaagatggtttgatgaagtgttgttgtgcaggatttggctatgccatcccgattgatatgatccgtatgtaaatgatttggctcatgttaataatcgtacccaaaaactgtacaaactaccaagataacgggaaaaaaatgatggtttacaaattgtttcggttaattttcctcagcgcatgtacccggcagccattgtgaggggtactgcgttactgttctacttgaatgactgggtgcgtctcctgaactctgattaaaagttcttggacagatgtagatgtttgaatggtccctgcccatctatccttttgcactactttttcacagttttaccctatgaagattggatgtagtaacaaaaactctcttctttctttgctcgcttttttccgttcccctacatccgttgcctgcacgcctacatctattctttttcaacattcagagaagagacaagagaaaatgtacttcagggatgatgggctccctggctatcaagcctattatcaatagcaatgcatgtaaagttgtaaacatgggcaattcatattattgttctgctaggctgctagctcagccgatcccccatatcacgatacagtactcgtattagtcaacctttcgggctccatgaaatggttacacgtctatttggtcttgttgaagcagacagaaaatatattaatatatggacctaagtgaactataaaagtataataacgatgtattgttatttttattccaaaaaaataaattaggcatgaatcgttcagtctttagcgtgatgtctgtatcgtataggagaactggtacaggtcaccatctcgttgattatcatgcgcactagcgcagatactcttgactcgaggaaattataaatggcatcgggaggttggttagctagaactctctccgtttcaaaataagcgcagttataagtttttttttaattttaatcgtctgtcttattaaaaaaatttaattagtatttttattgctattagcttataaaatatgaatagtactttgtgcgtgacttatattttttttatttttttttaaaaaaataaataagacggacaattaaaattgtacacggaaactcatcgtagtgattattttggaatggagtgaggaatatggtaggagtaatgtactaatcaaatcatatttggtctattttggaaaaaggaaaatcgaattaggtgtgagactgcaggcttaacaaaatcaaattgctcactgcccccaatgcctcatagttccctgttgatttgctgacccctgaaacatactagtatcaacaactttattttaggataattttaccatccttaaaaatgtatctagaagtaccaaaaattttaatgtaaaatttaggtatctcgatgtacttttttttaatgactgcaaaatttcttttatttttatctttcgattgtcaaagcaagtttagtgactgaggagtactacatgtgtaagacatacagctttggaaagtaggtatgggcattgtgcaggattgatcaatgtttgatggagggatggggtttcttccgatggcaacgtgttttttttttttgaaacgactgatagaaacgtgtttactcgccatattccaacttccaagcgtttagctaacctgtgaactttcttttgccaatccttcatctcctacaacttttgaccgagtggagctgcggaagcctctcccaatcagcttatcatcatccagcgactaatacaaacagaaaaaataccagtaggattaacagattagctaactactagcaggagtaatgttattctttttctatatctatgatatactactttgaatgatattagtgagggtgtctgagttttccccatcaccataagttaacatattagaccataagatcctcaaatgtgagtatttttgcacttgatatgacataatatgcctaattaactaactacgttagtaggtttgtaatttttatttttatatttatctcttatgatattcgccgcaatgcacagtacctttagctagtttaacagaaaaaaactgatcatgctgctgctgtataaatgcgcagggtcatggctgcactgcgggtaccacctgacgacgtccatcgtggcgccaccgctgctgagcctgccgttcgcgttcgcgtcgctggggtgggcggcggggctcatctgcctcgtcatcggcgccgccgtgaccttctactcgtacaacctcatctccctcgtcctcgagcaccacgcgcagcaaggacgccgccagctccgcttcagggacatggccaccgatattttaggtcagtaatcactcgtatacctatctatccgtaattacagttaaacaatgagattgatcgacagggattgttgcttcagccacaattaagactgtgtttagattcaaagtttgaatccaaacttcagtccttctccatcacatcaacctgtcatacacacacaacttttcagccacatcattttcaatttcaaccaaaatctaaactttacactgaactaaacacagcctaaacgctgctgtaaactacagccatttttagtactgctacagccgtaaccgctatagcaagaataggtactgaacacaccctattactatttactagttaggttcccattaaaatggaaataatgtagtaggttgatgctaatatactcattaaactcgagtacataagtgattaaaaggaaggcacgtagcaactccaagctaattggtagatggaggagaatctgcatataaaattgcattggctgacaactgtctcgcaaactcatactacgtgcaataccaaaagcattacaatacaatagtaagggcgttcacaatggacggacgtggcattcagccttcacccaaaaaaacgaatacagtacaactgtacaagtcagtagtgggtactagtatccatcacgaggcaggtaagattctctcgcccatgtcttcacttagccctggctcctaaaggcccgaattgagaatttggagaaaacaacctctgattataacacgggatttatttttctgtaatggaccatttctttcgaagcatttacatagtttgtgatattcttgcgttcaaacgagacatgaggatgagtcaatacatcaacacctatgtcgtcaccttgaatataggggcagaaacgccaagtgcagtgttctttcagaaaagaaaggaagggaggaaggaacaccaacttgtagacgtgacaggtttagcgactgatcattgatgtcctgttttattcacaagaaagtcagctgcccgcccccttttcttgtgcggaacaagtcagctgtattatttggccaaatcaagtcccatttcgcatttgcgagtttgcgacatgtacgtgtctgcagcattcatgagcaatgggtatggccatactatatcggaccggtaaactcttcaaccggagtgagtgcagcgtctgaagccgacatgttgcttgatttcagtaactgactaagcagcattcaataaaatcgtaacacggtacagtacaggttagaaaagtccagctgctagggctcgtattttgtcactgtcaagagtcgacgagggaaagaatccccactggttagataatactaattaaaactccagttagcgcttggcggatatatagagaaaaacttgattggtcgaaagggatagtattcccacattagtactacagatcatgcaattggtcgagtttgacgaatttgtcggcaagtatttgctgtggaatttaatattccagctttccacttgattgcctgtctaaatcgattgatactgcttgcgaaggaaaaaaaccagcaccgcgcgccgtttcttgtcaatatgtcaatcttaaatactccctccgtcccaatatgtaacaacctagaactggaccctccgtcccaatatgtaacaacctagaactggattggacatttcctagtactacgaatctggacaggacagtagtagaaaatgtcccatcggttctagattcttatatattgggacggagggagtagcactgtaccaggtgtagtagaatcagtcatatactagcatcctagctgatacgacattggacagataagcacaggtttaacgtacgtgttgggaaaaaggaatcgtccttagtgccatctggcagcagattcatacagtttaattacacacgcatctgacaaaaaatgtttcgaaagggatattcatcttcatcaccgcgacaaaatcactgtcactgagatgagattcatggttaatttttccacggtgatgcatgcagggcctggatggggacgcttctacatcgggccgatccagttcctggtctgcttcggggcagtcgtcgcgtgcactctcctagccggtcagagcatgaaggtatcttcatcagaacttagtccacgaactgatttcgtgtcggatcggatcggatcgcgttcatcaattgcacatggtatgaatccacatttcttactcgatcgcgttgcaggctatctacctgattgccaacccgggcggcacgatcaagctgtacgtgttcgtggcaatcttcggcgtcttcatgatgatcctggcgcagatgccgtcgttccactctctccgccacgttaacctcatctccctcgtgctgtgcctcgcctacagcttctgcgccgtcgccgcctgcatctaccttggtaggtttcccggcgacccggcccattatttagattagctattgggctttaatttggcctgtcgacgcgacggattaaaattggactgacgaattttgtgcaggaagctcaaagggagcgcccgagaaggactactcgatcgccggcgccaacacccgtgaccgcgtgttcggcgtgttcaacgccatcgccgtcatcgccacgacgtacggcaatggaatcatccccgagatacaggcgacggtggcggcgccggtgacggggaagatgttcaaggggctgtgcctgtgctacgccgtggtggtgacgacgttcttcagcgtggccatctcggggtactgggcgttcggcaaccagtcgcagggcacgctcctgagcaacttcatggtgggcggcagggccgtcatcccggagtggctgctgctcatcatcgagctcttcacgctgctgcagctgtcggcggtggccgtggtgtacctgcagccgaccaacgaggtcctggagggcctcctgtccgaccccaaggccgggcagtacgccgcgaggaacgtcgcgccgcgggtgctctcccgcaccgccgccgtcgcgctgggcaccaccatcgcggccatggtgcccttcttcggcgacatgaacgcgctcatcggcgcattcggcttcctcccgctcgacttcgctgtgccggcggtgttctacaacgtgacgttcaagccgtccaagaagggcgccgtgttctggctcaacaccaccatcgccgtcgtgttctccgcgctcgctgtcgtcgcgtcagtcgccgcggtccggcagatcattctggacgccaatagctataaactgttcgcgaacgtgtgatgttattatgctttaactcttgacaaaggaacatcaatgcaggaagaagattttttttccttttatttttcttttttttaaaagaagtcatcttcccacttatgtttatattatatttattaatcatttattagcaactaaaaataatttatagcatgtctttagtgatttaaaaaaaaatactgtaaaataaactacaacg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0857400, RefSeq:Os01g0857400