Os01g0860800

From RiceWiki
Revision as of 05:11, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0860800| Description = Glycoside hydrolase, family 17 protein| Version = NM_001051409.1 GI:115441188 GeneID:4324736| Length = 4891 bp| Def...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0860800

Description

Glycoside hydrolase, family 17 protein

Version

NM_001051409.1 GI:115441188 GeneID:4324736

Length

4891 bp

Definition

Oryza sativa Japonica Group Os01g0860800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:39025658..39030548

Sequence Coding Region

39026009..39026072,39026802..39027934

Expression

GEO Profiles:Os01g0860800

Genome Context

<gbrowseImage1> name=NC_008394:39025658..39030548 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:39025658..39030548 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagctctgcgtccgcgcctcctcgcttctgctcggcctcctgctccagctcctttcctcagtggacgtggtgtcggcggcgcagaaatttggtatcaactatggccagatcgccaacaacctgccggacccgacgcaggtggccggcctcctccagtcgctgaacgtgaacaaggtgaagctctacgacgcggaccccaaggtgctgatggcattcgccaacaccggcgtcgagttcatcatcgccatcgggaacgagaacctgcagtccatggccggcaaccccggcgccgccaggcagtgggtgacgcagcacgtgcagcccttcctaccggccacgcgaatcacctgcatcaccgtcggcaacgaggtgttctccggcaacgacaccggcatgatggccagcctcctgcccgccatgaaggcgatctacgccgcggtcggcgaactcggcctcggcggccaggtgaccgtgtcgtcggcgcactcggtgaacgtgctcgccaccagcttcccgccgtcgtccggcgcgttccgggaggacctcgcgcagtacatccagccgctgctcgacttccacgggcagacgaactcgccgttcctgatcaacgcgtacccgttcttcgcgtacaaggcgagccccgggagcgtgtcgctgccgtacgtgctgttcgagcccaaccccggcgtgcgcgacccaaacaccaacctctcctacgacaacatgctgtacgcgcagatcgacgccgtgtacgcggccatgaaggccatggggcacacggacatcggcgtgaggatctccgagaccgggtggccgtccaagggggacgaggacgaggccggcgccaccgtggagaacgccgcggcgtacaacggcaacctgatgcagcggatcgccatgaaccaggggacaccgctcaagcccaacgtgcccatcgacgtgttcgtgttcgcgctgttcaacgaggacatgaaacccgggccgacctcggagcgtaactacggtctcttctaccccaacggctcgccggtctacgccatcaacaccggcgccggtggcgtgtcagggcggacggggccgttcgacccgtactcggcgcagatgttctcgtcggcgtccagattggcggtaaggacagcatctttgacactgctactgctagtattgccccttctgtcctcattctcttgctaa</cdnaseq>

Protein Sequence

<aaseq>MELCVRASSLLLGLLLQLLSSVDVVSAAQKFGINYGQIANNLPD PTQVAGLLQSLNVNKVKLYDADPKVLMAFANTGVEFIIAIGNENLQSMAGNPGAARQW VTQHVQPFLPATRITCITVGNEVFSGNDTGMMASLLPAMKAIYAAVGELGLGGQVTVS SAHSVNVLATSFPPSSGAFREDLAQYIQPLLDFHGQTNSPFLINAYPFFAYKASPGSV SLPYVLFEPNPGVRDPNTNLSYDNMLYAQIDAVYAAMKAMGHTDIGVRISETGWPSKG DEDEAGATVENAAAYNGNLMQRIAMNQGTPLKPNVPIDVFVFALFNEDMKPGPTSERN YGLFYPNGSPVYAINTGAGGVSGRTGPFDPYSAQMFSSASRLAVRTASLTLLLLVLPL LSSFSC</aaseq>

Gene Sequence

<dnaseqindica>352..415#1145..2277#gagggatccgtggaagcaaattaaaccgtgggagcgcacgagttacgcggttactcggcgagccgagcaccgccgccgacctccggtgagatattttctttttaactacctcggtgaagcacggccggctataccttctcccgttggtacaccgtacacactgtataaaagcgatcgcatactcgtagcgggggccgatcccgaggagagaggaaggggaggggcgctgtattaattcgaacgtaaccaccctccccgtcatcggcggcgagaaacagaagtacagaacagagaagaagagcgagagaccgagggaggaggaggagagagaaggcgaggcgcaaagcgcaaatggagctctgcgtccgcgcctcctcgcttctgctcggcctcctgctccagctcctttcctcaggtgagtaatccggtgtctttctctctcagcttcctccgttcgccgcctctggcgccattgatgctgaattgctgatcaatctcatgttagtcttggattttttcttctgctaaaaacccttctgtcattgtggatgatttgctttttagaattttatgcgcgattgaattccatgttggtattacaattcccaaggagcacgcggtttttgttcatcccaatttgaagaaagtttgcgcttttcttggtaagagcaacacttactggaggcgtatggagatctgagatccgtcaaacctagctggagtactagaatttgcatagtactatgcggagatattttctctgaattaattgtgccgacttaaatactttgtcatctctgatttgcacccagccacccatgcttcctatcttgaggcgtattaatacgtcacaatatacgatttttttgctgaatccacacacttgcgaattgacccttgtgctgtagatgccaattccatccgcttgcataattattagccaacttgtgtatcgttcatcgatatcatcgggtttttttttcggcgagctaattgcgaaagtgacttggtacctaaagtattccgtgctgtgaaaaggaaattcgatttcatagtttttcttaaaaaaaatcttatcctgaagaaattttgatgtaatcgctgtacgtaattgctcactggtaagctcgtcgtgtgttcgcagtggacgtggtgtcggcggcgcagaaatttggtatcaactatggccagatcgccaacaacctgccggacccgacgcaggtggccggcctcctccagtcgctgaacgtgaacaaggtgaagctctacgacgcggaccccaaggtgctgatggcattcgccaacaccggcgtcgagttcatcatcgccatcgggaacgagaacctgcagtccatggccggcaaccccggcgccgccaggcagtgggtgacgcagcacgtgcagcccttcctaccggccacgcgaatcacctgcatcaccgtcggcaacgaggtgttctccggcaacgacaccggcatgatggccagcctcctgcccgccatgaaggcgatctacgccgcggtcggcgaactcggcctcggcggccaggtgaccgtgtcgtcggcgcactcggtgaacgtgctcgccaccagcttcccgccgtcgtccggcgcgttccgggaggacctcgcgcagtacatccagccgctgctcgacttccacgggcagacgaactcgccgttcctgatcaacgcgtacccgttcttcgcgtacaaggcgagccccgggagcgtgtcgctgccgtacgtgctgttcgagcccaaccccggcgtgcgcgacccaaacaccaacctctcctacgacaacatgctgtacgcgcagatcgacgccgtgtacgcggccatgaaggccatggggcacacggacatcggcgtgaggatctccgagaccgggtggccgtccaagggggacgaggacgaggccggcgccaccgtggagaacgccgcggcgtacaacggcaacctgatgcagcggatcgccatgaaccaggggacaccgctcaagcccaacgtgcccatcgacgtgttcgtgttcgcgctgttcaacgaggacatgaaacccgggccgacctcggagcgtaactacggtctcttctaccccaacggctcgccggtctacgccatcaacaccggcgccggtggcgtgtcagggcggacggggccgttcgacccgtactcggcgcagatgttctcgtcggcgtccagattggcggtaaggacagcatctttgacactgctactgctagtattgccccttctgtcctcattctcttgctaattaatgatacctttgtatacaaaaacgtgcaaatcaaccatggggtaggcctggattccaaaatttggccgacagcgatgtggctcagaaaaaagctttcatcttttctcttattcccctcacaacgatctgaaaaaaagtcgccttttcccctctgtgcactaacctatcaagatgtggaaacacccaaaggggaggtcgaaagatgaacgggcatcacagaaagcgcggcaatgttaggaatgtttgactgaacaggaaacagagaacattttagccgcggcggcctttgcatcgcttttgtactcgcgtttctgaaagtgtcacagtagcagcacagaaacatctcattccgtcatagtagttgcacagagacatctcgttttgtcactgacaaacaaggcttgatcggtgtgatcatctcactttgtttttgctcaccttctcgcttgcagatgacgtctgggatgggggtagttgtcctactcggcgcattattcctctgagcttcctccacacgtaccacgcagcagagaaagaaagtcccacgactgaacgaatgattgggggtggttcacttctgactaacgcatccagcagtctctgagttgtcatttcattcagagccggccgattgcatgtgttcgtcctgacagcaaggtaactaaccgaagctcatctctgcaccctccaatacctgatacggcaatttgttactactgccagattgtgtgcttagaaagtccatcaagtaccaaacaacctgttgaaaattgcaacggaatcctcgggtttagatccatgcgggtaggtgaccggtcactggcacgcgtggccgactcggcgctttggccggtagccgcttgtgcgccatgtgaaataatggcgagttagcgtatcctcccgggtcgcgtgtcatggatgatgggctactgtttgttcggtgcatcatattgcagcgccattgctgcaggtcccttcaggctttgagagctccttccaaaccaacggcaaccagccactgtcgagaaccatcgaaagctttcctcgagtcaccaccattgctgctacaatccaaatagagtagggacgttttcaggtagagcagtgttgtccctgtctgcgactgcagcaacacgcttggataagcaagttgttgatcactactcgctaacgaaggaagtagttttgagaggtcaattaagccaactaatgtgatgcaaaaaaaaaaaacggaatggctatctgtctgtcgcatgatttttatgggctgtatcatgcgttttattggccctctgatatgtttgagattcgtgcactcttttctttttttctattttctttgtgggttttttaatatttttagttgtgggctttgggctttcacggttatgttggacctttttttctctttatgggacccactgtatgttgtgtccatgagagtttatgtagggcccacttttactgttgaaattttgaaatccgcgccggagagagggtttgtctgaattacatcgtatttacactataattacatatgtaattttagtatatttacgatgtaagtctgaaaactacttgagcccatttaaacccacgtgagctttagattgtccacgtggcccgtttgttgttttgtattttgtttgtatatattaatgtcatccgttagatgttcatccaaagggtaagaaatctgcatgataggaggctaaaaaatctgtcacatgatgtatatacagtcaaaaaaaaaaaaccgtatcatgtagctgagcctgtatcgtcatgttagtaatcatcgcgtaaacgtggaggcgcttcctcgaaagaggacgtacaagtggatcgtggaatatctacgcctttgtctgatacttttattctaaagtcacactcttccatgtagcattgtgcgattgctggctaggagactttattcccgatatcagaaatgtgtagctaatataccatctattaccaaccagtcttcagaaaaaagaagaaaaaaaatctggctgcctaccctatccctgtccctgtagtggtatatttttttcctgtttggcatctatgaaagtttttatactacctcgctagagcaagattacaagaagcatgcgttcatgcttgtccagactccagagagaatgcattatgcaattttcacttctaagttctatagcttctatcaactcattatgcttgttttatgatgcaggagactgagaatttatactagttctgaatggacatcgagatctttactatagtcgcactaactgcggaggaggaagctgttagataaacctggtgtactagctagcttgaccatgtccttgttattgctaatcggtcagtcacgtcactttgaaagaactgaaggctctcaattctggacgaagtggctgtaactgtctttaagcaacggcaagttcatgattaggctcatagaattcattttgctacctttcgttttccgttttattggtggggttactgtatctattcatctagattcgtagcagattttacacggaattatagctacagatgaagtatatgtggtgtgtcatttgttacatttaaatacagagatacgattttttgtctg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0860800, RefSeq:Os01g0860800