Os01g0860950

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Revision as of 05:11, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0860950| Description = Conserved hypothetical protein| Version = NM_001185734.1 GI:297720602 GeneID:9271646| Length = 4204 bp| Definition ...")
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Gene Name

Os01g0860950

Description

Conserved hypothetical protein

Version

NM_001185734.1 GI:297720602 GeneID:9271646

Length

4204 bp

Definition

Oryza sativa Japonica Group Os01g0860950, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:39032178..39036381

Sequence Coding Region

39032178..39032872,39035312..39035375,39035881..39036381

Expression

GEO Profiles:Os01g0860950

Genome Context

<gbrowseImage1> name=NC_008394:39032178..39036381 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:39032178..39036381 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccggcctgcttgtcgtcgtccccgtcgtggtggtcttcatccaacgccaccttcttcctggcgtgtcgtcgtcctcctccttggcaagagcagccgccgccgcagaggagcacggccaccaacccgcgccaccatctccggccccggctgcggccgtacctctcccggtcggaaagcaccttgccaatgcaggacaccttgggcgaccgcggctcctcctcgccgtcgcccctgcggctgctgccgccgccgccgccgccgcggctgcccgagcgcttgtcgggcaagatccggccctgcgacgggcggcgccgggtgaacgccgggcggatgctcgcggggaggccgaagaacgtggtggcggcggcgggggcgcccgcgatgcgcgtggagttggagcgcgacttggccgggatggggttggaggaggcgccggccgccgacttggggttggtgcttcccttggtggagtcgtcccggtcgtatatcgggttcagctccgagaaggccacctcgtcgccgatggggatggttatcgactccggcgggaagtcggggtccggcggcggcggcggcggcggcatccgcggcggcgacgcgtccccgctctcccccgccgcgatgaccgtctcgcacgacaccttcctgtcgcccgctccggcgcccgccacgccgcacaccaagctctccagggaaccatatattgttaccctccaaatccaatcggaccatgtgaaagaaatcgcatcataccaactgcgggggcttactttgtcacgggccggaggttggcttgccgggcccagacagcggcggctgctgcggcggcggaggaggagtggaagccgcctgcgactcctcggcggcggcgagttggcggaggcgggcctggagtccgcggactcggtcctcggtgcggcggagcttgcaccagcgccaggtgaggtaggcggcgaggccgccgtagacgaggatgtaggatccccacacgtatgggtaggtctccgcgtgctccttcgtcttccgccactgctcctccagcttcgcgatcacgccgcctccatatgccgccaccccagcctccgccgccgcagcctccggttgctgctccggctgccgcgtcgccttcgcgtcctcaccgtccccggcggccgccgccatgaggcgctgcttggtgcttggagtggaatagggcaacgggacaaggcgagcaatgagttgcgggatagtcgtcggcccaggatgatgggcttctag</cdnaseq>

Protein Sequence

<aaseq>MPACLSSSPSWWSSSNATFFLACRRPPPWQEQPPPQRSTATNPR HHLRPRLRPYLSRSESTLPMQDTLGDRGSSSPSPLRLLPPPPPPRLPERLSGKIRPCD GRRRVNAGRMLAGRPKNVVAAAGAPAMRVELERDLAGMGLEEAPAADLGLVLPLVESS RSYIGFSSEKATSSPMGMVIDSGGKSGSGGGGGGGIRGGDASPLSPAAMTVSHDTFLS PAPAPATPHTKLSREPYIVTLQIQSDHVKEIASYQLRGLTLSRAGGWLAGPRQRRLLR RRRRSGSRLRLLGGGELAEAGLESADSVLGAAELAPAPGEVGGEAAVDEDVGSPHVWV GLRVLLRLPPLLLQLRDHAASICRHPSLRRRSLRLLLRLPRRLRVLTVPGGRRHEALL GAWSGIGQRDKASNELRDSRRPRMMGF</aaseq>

Gene Sequence

<dnaseqindica>1..695#3135..3198#3704..4204#atgccggcctgcttgtcgtcgtccccgtcgtggtggtcttcatccaacgccaccttcttcctggcgtgtcgtcgtcctcctccttggcaagagcagccgccgccgcagaggagcacggccaccaacccgcgccaccatctccggccccggctgcggccgtacctctcccggtcggaaagcaccttgccaatgcaggacaccttgggcgaccgcggctcctcctcgccgtcgcccctgcggctgctgccgccgccgccgccgccgcggctgcccgagcgcttgtcgggcaagatccggccctgcgacgggcggcgccgggtgaacgccgggcggatgctcgcggggaggccgaagaacgtggtggcggcggcgggggcgcccgcgatgcgcgtggagttggagcgcgacttggccgggatggggttggaggaggcgccggccgccgacttggggttggtgcttcccttggtggagtcgtcccggtcgtatatcgggttcagctccgagaaggccacctcgtcgccgatggggatggttatcgactccggcgggaagtcggggtccggcggcggcggcggcggcggcatccgcggcggcgacgcgtccccgctctcccccgccgcgatgaccgtctcgcacgacaccttcctgtcgcccgctccggcgcccgccacgccgcacaccaagctctccaggtcaacctgtggcattactgccacttccccactagccacgcagctctgaacaactgagcagagagtgagcaagagattggagctcgagctaggagtagagactgagagagagtgtgagagctgtatgacacacgcttgccttaaaaattcatgagaggagtagatggagctgaggctgcatcagctgcgttcagaggctgtcgtaaacctacaaataaatgaaggtgcagaaaaatgccgcctctgaatcgaaacgaactccaaaaacggatctcgactatttgtctccctaaaacatcagtctaaccgagttgaaactgactaattactgtggtttagagaaaactgacaatgtcaataccctagtaatgcagctgccacgaggtgatatctgtaaaaataccctccgtgtgtttcgttttctgaggttaacaccatgatcttgtggttagatccttatatatcagttactaatttattcggtagggttaacggtgaggcagatagtagtggccagagcgattttcatgccgatctggagtcctccgacaaagccattttccccagtggccctcccaattaataagcatagtcttttcatttcagcgtggaatgcccagtgatccccctcagaccgatctgtcttttagttactatcaagcagtgaccaccaaaatgcgataatcacactaccacagtagcttaacagttttccaaataaataacagttgtgcctgcagatcagcctggcgacacctgtatattcagttaaaagagaaaatgcacttcagcacatgtaaccaaggtctaaggtcagagcacttggatcaatcacaatgacaccacgaaataggttaaacctcttcccaaaaatatgcaacatctagcataatttttaccgggatcagaggtacgattcaaggagcaaatctgcagtgaataagtgcaagttcatgaaccggaatgggagagggtcttggtaaaaggaatcaaagggccagttcttggcacaaggtttctgctcgacgccacatggccgtgtcgggcagagtagcagaagggcatcagcggggcacctacccagtgtgtactattttgttgcctttgctgcagatggagctccagtggcatcagtcgttggtgagctgtgcaaggaccatgtcttggcttccaaacctgctgctctctccgactctctctcgctcctcctcaaactcccagactttagcagactgaatcctagcaatactggcaaagagaaatctgaatgacccgaggcagacctatcagctgctctgaaagtctgaatcacgcagttgattttagagtttgtggcacaaataaatgaaaacggtcagcactcagatagtcggagtagctttatggaatggagaatcccagtatttataatagcagagaatgagagaagaaagatatagcatgcatttacatttttccttgcaaagaaaaacgagctgcatctggtcgacattccaaacgagtccaaccttggtcaacagccccacaagctcctatggggtcggaattattgtactcccataacataatcacaattcgaaacagtgtcgagagggacgataagctgaattaagatcaagtcccagacatgataacttaggaaataaatatcctagctgagtgggcctcctatgcaagagcttaacccagacagctccctgaatgtctatggtctgatgatattgccacaacagggaatccaactccaagcaaggattgtgaacgggagaatcaaagtacaccttatattataaggtgttttggttacaaagctcgtggcaaatacagggctacttgcattttgactgtacagtaatggtctctaccatctagtacagacaaatttgtcttcaatgcattgcagcaatgacaaacaataatggatggagcaaagtataaaacaaaaaatgggcatgccaaactgctaattagcaataacttgatttgaaattttaggcaccaggtaactcatgaatctcaagacagtttataatcaccgaatcacaaaggttagcgtttgaaacaaattattcagcagattactcccacggattgtctacttgattacagggataaattaaacattttatgaaataaactgaacagatagcttagaagtgtggccgtggagcaaataacccacagcaataatccagtggataagctaaaaagaacagggcaagctaaacgtgctatgttaagggaaagggaagtacaaagcttgataatttctcaggcacaacaatgaataccaaaactttgatgccggcatcaaataaccgaatgaaactattctctagttcacagttttaggttcaggcatccagaaatcatcccaacgttaagggcttaaggccgatgcaaacaaattgggtgtgcttattctgttgatttatccagggaaccatatattgttaccctccaaatccaatcggaccatgtgaaagaaatcgcatcataccaagtttgtttaggtttctctatcgaattccccacaaggtctgcaatgatgatgcttcaacacaagatccggctagatcaacatattgttatctggtgatcacagtaatctggagggcaaaagtgcatatcagtagctcagcactgcaaaatgtgagaaatacatgaactcttatgctttcaattaaagctgggtgggtgaccgtctttcctctaaaatgtgagaaatacagagatgatgcaaatgtctcaaagatgggttttggtgacaacaaaaaaacccaaatcgctcgtgggaatgatcatcatacattgatcgcaaaaatctaaacctttggcagaatggtttcgagtacgagcactgaatttccaaaggccacttagcattctccatttcacctatctcctcccaatctaggatcacctactactaagcaaggaaccaaacattgcatcgagctcaaatgatgcagtaattgttttgtaacatgtaaacctttcttttcaagctgcgggggcttactttgtcacgggccggaggttggcttgccgggcccagacagcggcggctgctgcggcggcggaggaggagtggaagccgcctgcgactcctcggcggcggcgagttggcggaggcgggcctggagtccgcggactcggtcctcggtgcggcggagcttgcaccagcgccaggtgaggtaggcggcgaggccgccgtagacgaggatgtaggatccccacacgtatgggtaggtctccgcgtgctccttcgtcttccgccactgctcctccagcttcgcgatcacgccgcctccatatgccgccaccccagcctccgccgccgcagcctccggttgctgctccggctgccgcgtcgccttcgcgtcctcaccgtccccggcggccgccgccatgaggcgctgcttggtgcttggagtggaatagggcaacgggacaaggcgagcaatgagttgcgggatagtcgtcggcccaggatgatgggcttctag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0860950, RefSeq:Os01g0860950