Os10g0519300

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Revision as of 08:45, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0519300| Description = Similar to Avr9/Cf-9 rapidly elicited protein 102 (Fragment)| Version = NM_001071613.2 GI:297610794 GeneID:4349132| ...")
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Gene Name

Os10g0519300

Description

Similar to Avr9/Cf-9 rapidly elicited protein 102 (Fragment)

Version

NM_001071613.2 GI:297610794 GeneID:4349132

Length

1599 bp

Definition

Oryza sativa Japonica Group Os10g0519300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:20537325..20538923

Sequence Coding Region

20537325..20538923

Expression

GEO Profiles:Os10g0519300

Genome Context

<gbrowseImage1> name=NC_008403:20537325..20538923 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:20537325..20538923 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgccgcgggagggcggcggcggcggcggaggcggcgtggtggggttggtagcgtacgcggcgctggcggtggtggcgctgcgggtggtgctgtcgtacaagtcggtggcgcacgcggtgcggaggatgtggcggtgggcggacgagtgggcgcaggcgtaccagtactacgaggtgccgcggttcggcggcggcggcggcgagggggtggagaatccgctgttcaggaaggcggcggcgtacgtggcggcgctgccgtcgctggaggacgcggacgcggcgtgcgtgctgtcgtcggcgtgcaagaccaacgacttctcgctgcagctcgggccggggcacacggcgcacgacgcgttcctcggcgcccgcctcgcgtggaccaacgccgggccggcgggcgacggcggcggcggccgcgagcgcctggtgttgcgtgtgcgtcgacatgacaggacgcgcgtgctgcgcccgtacctgcagcatgtcgagtcggtcgccgacgagatggagctccgccggcgcgagctgaggctgtacgcgaacaccggcggcgatggcgccccctcgccgaagtggacgtcggcgccgttcacccacccggccacgctggagacggtggccatggacccggagctcaaggcccgcgtccgcgccgacctggagagcttcctcaagggcagggcgtactaccatcggctcggtcgcgcgtggcgccggagctacctgctctacggcccgtccggcaccgggaagtccacgttcgccgcggcgatggcgaggttcttggtgtacgacgtctacgacatcgacatgtcccgcggcggctgcgacgacctccgcgcgctgctcctggagaccaccccgcggtcgctcatcctcgtggaggacctggaccggtatctccgcggcggcggcgatggggagacgtccgccgcgaggacgtcgaggatgctcagcttcatggacgggctctcgtcgtgctgcggcgaggagcgcgtcatggtgttcaccatgagcggcgacaaggacggcgtggacccggccatcctgcggccggggaggctggacgtgcacatccacttcaccatgtgcgacttcgaggggttcaagactctggccagcaactacctcggcctcaaggaccacaagctgtacccgcaggtggaggagggcttccacgccgccggcgcgcgcctcagccccgccgagctcggcgagatcatgctcgccaaccgcgggtccccgagccgcgcgctccgcacggtcatcaacgcgctgcagcacgtggcgccggccccggcgccgccgcagcagcagccccgggcgagctccgcgtcgcggccgccgcccaggctgaccgcgagatggtccggtcacctcgacgaggcaagcgcggcggacgcaagcgcggccaaccaatcgccgggcggcggcggcgggggattcgggaaggacgcgccgatgagggagttcaagaagctctacgggctgatcaagatcaggagccgcaaggacggcggcgtcgttcccgtcgacgacacggcgtcggcgaacggccggggcagtgacgtcagcgccgataaggaccggtga</cdnaseq>

Protein Sequence

<aaseq>MTPREGGGGGGGGVVGLVAYAALAVVALRVVLSYKSVAHAVRRM WRWADEWAQAYQYYEVPRFGGGGGEGVENPLFRKAAAYVAALPSLEDADAACVLSSAC KTNDFSLQLGPGHTAHDAFLGARLAWTNAGPAGDGGGGRERLVLRVRRHDRTRVLRPY LQHVESVADEMELRRRELRLYANTGGDGAPSPKWTSAPFTHPATLETVAMDPELKARV RADLESFLKGRAYYHRLGRAWRRSYLLYGPSGTGKSTFAAAMARFLVYDVYDIDMSRG GCDDLRALLLETTPRSLILVEDLDRYLRGGGDGETSAARTSRMLSFMDGLSSCCGEER VMVFTMSGDKDGVDPAILRPGRLDVHIHFTMCDFEGFKTLASNYLGLKDHKLYPQVEE GFHAAGARLSPAELGEIMLANRGSPSRALRTVINALQHVAPAPAPPQQQPRASSASRP PPRLTARWSGHLDEASAADASAANQSPGGGGGGFGKDAPMREFKKLYGLIKIRSRKDG GVVPVDDTASANGRGSDVSADKDR</aaseq>

Gene Sequence

<dnaseqindica>1..1599#atgacgccgcgggagggcggcggcggcggcggaggcggcgtggtggggttggtagcgtacgcggcgctggcggtggtggcgctgcgggtggtgctgtcgtacaagtcggtggcgcacgcggtgcggaggatgtggcggtgggcggacgagtgggcgcaggcgtaccagtactacgaggtgccgcggttcggcggcggcggcggcgagggggtggagaatccgctgttcaggaaggcggcggcgtacgtggcggcgctgccgtcgctggaggacgcggacgcggcgtgcgtgctgtcgtcggcgtgcaagaccaacgacttctcgctgcagctcgggccggggcacacggcgcacgacgcgttcctcggcgcccgcctcgcgtggaccaacgccgggccggcgggcgacggcggcggcggccgcgagcgcctggtgttgcgtgtgcgtcgacatgacaggacgcgcgtgctgcgcccgtacctgcagcatgtcgagtcggtcgccgacgagatggagctccgccggcgcgagctgaggctgtacgcgaacaccggcggcgatggcgccccctcgccgaagtggacgtcggcgccgttcacccacccggccacgctggagacggtggccatggacccggagctcaaggcccgcgtccgcgccgacctggagagcttcctcaagggcagggcgtactaccatcggctcggtcgcgcgtggcgccggagctacctgctctacggcccgtccggcaccgggaagtccacgttcgccgcggcgatggcgaggttcttggtgtacgacgtctacgacatcgacatgtcccgcggcggctgcgacgacctccgcgcgctgctcctggagaccaccccgcggtcgctcatcctcgtggaggacctggaccggtatctccgcggcggcggcgatggggagacgtccgccgcgaggacgtcgaggatgctcagcttcatggacgggctctcgtcgtgctgcggcgaggagcgcgtcatggtgttcaccatgagcggcgacaaggacggcgtggacccggccatcctgcggccggggaggctggacgtgcacatccacttcaccatgtgcgacttcgaggggttcaagactctggccagcaactacctcggcctcaaggaccacaagctgtacccgcaggtggaggagggcttccacgccgccggcgcgcgcctcagccccgccgagctcggcgagatcatgctcgccaaccgcgggtccccgagccgcgcgctccgcacggtcatcaacgcgctgcagcacgtggcgccggccccggcgccgccgcagcagcagccccgggcgagctccgcgtcgcggccgccgcccaggctgaccgcgagatggtccggtcacctcgacgaggcaagcgcggcggacgcaagcgcggccaaccaatcgccgggcggcggcggcgggggattcgggaaggacgcgccgatgagggagttcaagaagctctacgggctgatcaagatcaggagccgcaaggacggcggcgtcgttcccgtcgacgacacggcgtcggcgaacggccggggcagtgacgtcagcgccgataaggaccggtga</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0519300, RefSeq:Os10g0519300