Os01g0862500

From RiceWiki
Revision as of 05:12, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0862500| Description = IQ calmodulin-binding region domain containing protein| Version = NM_001051418.1 GI:115441206 GeneID:4324747| Length...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0862500

Description

IQ calmodulin-binding region domain containing protein

Version

NM_001051418.1 GI:115441206 GeneID:4324747

Length

1603 bp

Definition

Oryza sativa Japonica Group Os01g0862500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:39077742..39079344

Sequence Coding Region

39077742..39077873,39077940..39078152,39078252..39078662

Expression

GEO Profiles:Os01g0862500

Genome Context

<gbrowseImage1> name=NC_008394:39077742..39079344 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:39077742..39079344 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gtcgtcactccctctgtgcgtcgtcgctgccccctccgtgcgccgccgtcactcccactgcctgctgccccctccctccctctgcgcatcagcgccgctatcagaatccagacagcattcagaggcttcctggcgaagaaggtgctgcgagcgctcaaggcgctggtgaagctgcaggcgctggtgcgtggcttcctcgttcgccggcaggccgccgccatgctgcagagcatgcaggcgctcatccgcgcgcaggccaccgtgcgcgcccactgcaccggtgccggtgccgctgccaacctcccgcacatccaccacgctcccttctggcctcgccgctcgctgcaggagaggtgcgccaccgacgatacgaggagcaagcacggcgtagcggcgtacagccggcggctgtcgacgagcatcgagtcgtcgtcgtacgggtactaccggagccccaagatcgtggaggtggacatcgggaggcccaagtcgcggtcgtcgtcgtcgcggcgggcgagctccccgctgctcgacgccgggtgcgcgagcggcggcgaggagtggtgcgccaactccatgtcgtcgctgctgccgtgctacctccccggcggcgccgccgcaccgccgccccgcatcgccgtcccgacgtcgcgccacttcccgtactacgactggtgcacgctggagaaggcccggccggcgatggtgcagagcacgccgcgctacgcgcacgcgccgccgaagcagcggccatag</cdnaseq>

Protein Sequence

<aaseq>VVTPSVRRRCPLRAPPSLPLPAAPSLPLRISAAIRIQTAFRGFL AKKVLRALKALVKLQALVRGFLVRRQAAAMLQSMQALIRAQATVRAHCTGAGAAANLP HIHHAPFWPRRSLQERCATDDTRSKHGVAAYSRRLSTSIESSSYGYYRSPKIVEVDIG RPKSRSSSSRRASSPLLDAGCASGGEEWCANSMSSLLPCYLPGGAAAPPPRIAVPTSR HFPYYDWCTLEKARPAMVQSTPRYAHAPPKQRP</aaseq>

Gene Sequence

<dnaseqindica>1..132#199..411#511..921#gtcgtcactccctctgtgcgtcgtcgctgccccctccgtgcgccgccgtcactcccactgcctgctgccccctccctccctctgcgcatcagcgccgctatcagaatccagacagcattcagaggcttcctggtaagcaatgggtgctcgtgtcctagctctgcttcaatggagtaatcatgccatgtgtttgtgcaggcgaagaaggtgctgcgagcgctcaaggcgctggtgaagctgcaggcgctggtgcgtggcttcctcgttcgccggcaggccgccgccatgctgcagagcatgcaggcgctcatccgcgcgcaggccaccgtgcgcgcccactgcaccggtgccggtgccgctgccaacctcccgcacatccaccacgctcccttctggcctcgccgctcgctggtacgccgctggcgaaatctcgccgacgacatcaccatgtatatattcgccgtactagttctgttcgatcttgacgttgtgtgttggcgatggatgcagcaggagaggtgcgccaccgacgatacgaggagcaagcacggcgtagcggcgtacagccggcggctgtcgacgagcatcgagtcgtcgtcgtacgggtactaccggagccccaagatcgtggaggtggacatcgggaggcccaagtcgcggtcgtcgtcgtcgcggcgggcgagctccccgctgctcgacgccgggtgcgcgagcggcggcgaggagtggtgcgccaactccatgtcgtcgctgctgccgtgctacctccccggcggcgccgccgcaccgccgccccgcatcgccgtcccgacgtcgcgccacttcccgtactacgactggtgcacgctggagaaggcccggccggcgatggtgcagagcacgccgcgctacgcgcacgcgccgccgaagcagcggccatagccgcgtctgccgccgctcctcatccctccgcgcaccaaagccgcctctccctcccttccgccgcctctgctgcatctgccggtcgccgtgccgcgttgtcatcgtcactaaccatggcgaccggatctggcgacctcgctgtcctcgtcgccgccatggttgtctgacagtcgtgaggagagtggagagagctcgagcttgccgatggagaggggagagagagttcgagcttgttgtcctctgccacacggagctcgacgctaccgataccgtcgcccttcgcctaggagttcgtcggggaggagagaggcggcccgatctgcgcagagagagagagagagagagagaggaaaggcgacgccaccagggatgggagaggcggcgctgccgccggtggtgagcggagtgggaggggaggcgtcggtggcgtcaggccatctccgtcggtggggaaaaggaggtggggaggggaggagaggggaagaaggaagaaaaaaaataaaaaaaaatctatgtcatcgtccatgttgcgtgccacgtagacaagaccacgattaaaccagactttagaccaagatgatacaataaaccaccaagtttagagatcttgatgtgtgttttgcaagtttgtggacctaagtgaaacctcattacaagtttaaggaccgctgatgcattttac</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0862500, RefSeq:Os01g0862500