Os10g0519600

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Revision as of 08:45, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0519600| Description = Protein of unknown function DUF791 family protein| Version = NM_001071615.1 GI:115482973 GeneID:4349134| Length = 32...")
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Gene Name

Os10g0519600

Description

Protein of unknown function DUF791 family protein

Version

NM_001071615.1 GI:115482973 GeneID:4349134

Length

3239 bp

Definition

Oryza sativa Japonica Group Os10g0519600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:20547000..20550238

Sequence Coding Region

20547081..20547231,20547412..20547556,20547646..20547814,20548599..20548869,20548966..20549228
,20549311..20549526,20549654..20549765,20549869..20549912

Expression

GEO Profiles:Os10g0519600

Genome Context

<gbrowseImage1> name=NC_008403:20547000..20550238 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:20547000..20550238 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggtgttctactacctcgtcttcggcgggctcgccgccgtcgtggcggggctggagctcggcaagtccggcaaggaccgcgtcgccaccaccccggccttcaacgcgttcaagaacaactacatcctcgtctactcgctcatgatgtctggggattggctgcaggggccgtacgtgtactacctctacagccagtacggcttcgacaagggtgacattggccgcctcttcatcgccggcttcggctcctcgatgctcttcggcaccatcgtcggatccctcgccgataagcaggggaggaagagggcgtgcattacctactgcatcagctacatcctgagctgcatcacgaagcactcgcctgagtacaagatcctgatgattgggcgcgtgctcggaggcatcgccacatcgctgctcttctcggcgttcgagtcgtggctcgtcgcggagcacaacaagagaggatttgacccacagtggttgtcgataacattctccaaggctatatttcttggaaatggcctagttgcgatcatcgctgggctatttgcaaatctgcttgcagataacttgggttttgggcctgttgctccatttgatgctgctgcttgctttttagcaataggcatggcaatcatcttatcatcatggagtgagaactatggagatacatctgataacaaggatctgatagcccaattcaaggttgcagccaaagccattgcttcagatgaaaagattgcattgcttggagctatacagtcactgtttgagggttcaatgtacacttttgttttcctgtggactcctgctttgagcccaaatgatgaagaaattcctcatggcttcatatttgccacattcatgctctcctctatgttgggtagctcaattgcctctcgtttgttagctcggaagctgaaggttgaaggttatatgcagattgtgttttcgatatcagcttttactcttttcctccctgttgtcactaacttcctagtacctccctcctcggtcaaaggtggtggcatctcatttggaggctgtctacagctgctcggtttctgtatatttgaatcctgtgttggcattttctggccatcaatcatgaagatgaggtcccagtatattcctgaggaggcaagaagcacgatcatgaacttcttccgcataccactcaacctgtttgtttgtgtggttctttacaatgtgaatgcattccccatcactgtcatgtttggcatgtgtgctattttccttttcatggcagcaatcttgcagaggcggctgatggttgtctctgatctccacagatcaacaaaagctgtagagatgactggggaagatgagccgttaaacccatag</cdnaseq>

Protein Sequence

<aaseq>MEVFYYLVFGGLAAVVAGLELGKSGKDRVATTPAFNAFKNNYIL VYSLMMSGDWLQGPYVYYLYSQYGFDKGDIGRLFIAGFGSSMLFGTIVGSLADKQGRK RACITYCISYILSCITKHSPEYKILMIGRVLGGIATSLLFSAFESWLVAEHNKRGFDP QWLSITFSKAIFLGNGLVAIIAGLFANLLADNLGFGPVAPFDAAACFLAIGMAIILSS WSENYGDTSDNKDLIAQFKVAAKAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSP NDEEIPHGFIFATFMLSSMLGSSIASRLLARKLKVEGYMQIVFSISAFTLFLPVVTNF LVPPSSVKGGGISFGGCLQLLGFCIFESCVGIFWPSIMKMRSQYIPEEARSTIMNFFR IPLNLFVCVVLYNVNAFPITVMFGMCAIFLFMAAILQRRLMVVSDLHRSTKAVEMTGE DEPLNP</aaseq>

Gene Sequence

<dnaseqindica>82..232#413..557#647..815#1600..1870#1967..2229#2312..2527#2655..2766#2870..2913#actctttctctctcccacttcacctcgcgatctctctctctctcttccccacctctacgcgcctccgcctccgcctccgccatggaggtgttctactacctcgtcttcggcgggctcgccgccgtcgtggcggggctggagctcggcaagtccggcaaggaccgcgtcgccaccaccccggccttcaacgcgttcaagaacaactacatcctcgtctactcgctcatgatgtgtgcgtaacgcctccccccgcccccagatttcccccccctttcccccaatcttcgagttcccctgcggcgtggtggctggatcgctcagatctgagccgggttgcaatgccggattgtttgggagggtttctgacgctgttgccgtggtgaatcgcgggtgtgggtgtgggtttttgcagctggggattggctgcaggggccgtacgtgtactacctctacagccagtacggcttcgacaagggtgacattggccgcctcttcatcgccggcttcggctcctcgatgctcttcggcaccatcgtcggatccctcgccgataagcagtgcgtgtcccgtgttttactcgttgattttgttgtgtttgtttggattttttttttgatgaggttgtgatgcttcctggttgtcgtagggggaggaagagggcgtgcattacctactgcatcagctacatcctgagctgcatcacgaagcactcgcctgagtacaagatcctgatgattgggcgcgtgctcggaggcatcgccacatcgctgctcttctcggcgttcgagtcgtggctcgtcgcggagcacaacaaggtcagatccgtgtgcccgtggtggtaaattggtggtgaccagggtttaaccttgatcttaacgagttcttcttttgctcattagaactcgctggtatttttgaagctacatctttggaatgattttgtttttgtaaagtgtgtgcttctgctaaaaaatgggtacaaaacgtgtgaactgtgaagtcaacatgacagggattatggtagtttgactgctagtatacaatgatttacatataaaatgactttgaggtatataaaattaaagagatctgaataagatctcatttatgatagctttgtcgactgtgaagtacaagtgtacaactcacaataaacatactatctatatcaggaactatggtttgctgtaatgctaactcttgccactgattatcttgcggtcttcctatcagtactccaactatttttatatgctttttaaagttctggtggatctagtattaaaatgacattgtaggaactcagaacagccccagttaatacttaataggccctgttcaataaaagttccaggatgaccctgactgagaaagtgagccatttgttgtagaaactagaaatcgattgataaatgcaaatataattagatgtccgttgtattcaactgcatgtctacatacatacattgttctattttgtgtatgacaagattgttaattctacgaaactgattaactagttacagcaatcttttattcaaatcttttgggaattcccttgattatctgttgacactgcaaatctaccttgctgtacagagaggatttgacccacagtggttgtcgataacattctccaaggctatatttcttggaaatggcctagttgcgatcatcgctgggctatttgcaaatctgcttgcagataacttgggttttgggcctgttgctccatttgatgctgctgcttgctttttagcaataggcatggcaatcatcttatcatcatggagtgagaactatggagatacatctgataacaaggatctgatagcccaattcaaggttgcagccaaagccattgcttcaggtagatttatcatgtccaccatagcaaagggcataatgtttttttaaatatttttttttattttaacatatcaaatggtttcttttgaaatttcagatgaaaagattgcattgcttggagctatacagtcactgtttgagggttcaatgtacacttttgttttcctgtggactcctgctttgagcccaaatgatgaagaaattcctcatggcttcatatttgccacattcatgctctcctctatgttgggtagctcaattgcctctcgtttgttagctcggaagctgaaggttgaaggttatatgcagattgtgttttcgatatcagcttttactcttttcctccctgttgtcactaacgtaagtctgctgcactcagtttattctcaatgttttcactttatagttcgaaagtttaacacaatctgtttttgttaaatagttcctagtacctccctcctcggtcaaaggtggtggcatctcatttggaggctgtctacagctgctcggtttctgtatatttgaatcctgtgttggcattttctggccatcaatcatgaagatgaggtcccagtatattcctgaggaggcaagaagcacgatcatgaacttcttccgcataccactcaacctgtttgtttgtgtggttctttacaatgtaagtagctaaatccaacttctgtttttttttctttatgaaaataacacaccaacaagcaaatgcaaatgcaaaaaaaaaagacatttgtcccagtaacattaatcatacaaatgatgttctgcaggtgaatgcattccccatcactgtcatgtttggcatgtgtgctattttccttttcatggcagcaatcttgcagaggcggctgatggttgtctctgatctccacagatcaacaagtatgttccccactatgattttcaacacaaataaatgcaatcttcttataatcagatgcagattctgttttgaaagtgctaattatgggtaaatttccttcagaagctgtagagatgactggggaagatgagccgttaaacccatagaagacaagacaatagatgtgaattggacatgaaaattgccatccaacttgagccgctttccactggctgctgaataagctggaaaatagcaggctggaatgaaacgtactagtagtagtttagtttgcttgtaggtagtctcaattcatttttgtcaggagagagtacacggtccagaaaatattgagctacaggcggcatagtaacgccttgcataggtctccttcccattcttttccactttcttctcgagtgtgatgatcgatgcttaaccattttggatgcaaaacatattgagtagtgtaacaaatttggtgattgttcct</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0519600, RefSeq:Os10g0519600