Os01g0865600
| Gene Name |
Os01g0865600 |
|---|---|
| Description |
Basic helix-loop-helix dimerisation region bHLH domain containing protein |
| Version |
NM_001051434.1 GI:115441238 GeneID:4324795 |
| Length |
6227 bp |
| Definition |
Oryza sativa Japonica Group Os01g0865600, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:39213372..39219598 |
| Sequence Coding Region |
39213592..39213701,39214010..39214249,39214353..39214434,39214747..39214788,39214873..39214932 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:39213372..39219598 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:39213372..39219598 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcgggcgccgccccgctgcgcgactccctccgccgcctctgcaccgacgtcggctggtcctacgccgtcttctggagggccacccgcgccgccgactcccagcggttgaaattggtgtggggggatgggcactatgagcgggcggccggagcgccgtcgatctccggcttcgaggccatggacctgctgctcaaggagaaggccgcggcgttgcggagcggcaccgggcgcggtggtggcggcggcgaggggcacgcggctgatggcgccgcgggacacagccatgacagggtggacgcgctcgtgcacaaggccatggcgcaacaggtccacgtcgtgggagaaggggtgattggtcaggctgcactgacagggttgcatcggtggatcgttcacgatattgttgatgagtgtgaggaagaagatgaggtattgctagagatgaagggccagttttgtgcaggaatacagacaattgcagtgatacctgtccttccacgaggcgttattcagcttggctccacaaaaatggttatggaggaagcagcatttatagatcatgtcagatctttgtttcagcagctgggtagttcaactgcagttgttccgtgtggttcctttgtacaagattcgattatgagaactccatttcacaaatcacttggtgtgcctacctcttcgcactcggaagaccttgctggtggtggaaatacttataatgatgacatgattaaccaccagttcaggcatcagaagtcaccagcctcgacaattcagtcatttaaccctgtacaacagttctatgctgggcctactttctgtcgtccagtaactattgcatcacgttgtgatctcttccaacctgaccatggatcaacctttactttgaacagtcagtcagaggacaatagatcgacagctttactcaaaaatagtgtttcacattctaaaacatcaaatgatgccttttcacacgcttttaaccccctcaatgaacccaacgtctccatttcaggcagaagagagtgtgtaagcatagaacaacatggttcttgccgtaatggagaaatggaaataacaataggccgcactgcttcttcaagttgtacaggcaaaacaaatattatcaataaagtggatgatttgctgagtcaggattgtttggtaggttgtcaggcaagcaatgccacatctgtgaacagaaagtttcagacaatgtccattgttgataatacaaagcttcaagatggttcttatgcaattccacatgctgcacttgttgactctacccaatattcagactgctttcaatcgcttcttggcacaatccaaggtagttcttccagcaattcaaatgcaattcatgtggatacttctcataatgctgtccatggaaagagtaacttttgccctttaggagataggaatgctgctaattcaagtgacttggctgaacttctggcatcgccaataccattagagttgactgggggaaacgatttgtttgatgtactgcaacttcagcagaagccaaatggttcaaataatagtgaagtaaacaatcgtcaatcaatgccttatggttcagagcaagctgttaagtctctgattggatgtgtggatgatgatttcactggattgatcacagaagctgatccagaccagctcctggatgcaatagtttcaaagataatcacagggcacaagcagaacgtggataccagtgcttcttgtagtactacagtggcaggctttgacagaccacttcattctgattgccacctatataccacaggaccatcatcagggccaatattttgtaattttgccagtgttgctcctgtagcaattaaaactgaagggcctgctgcaggttccaggcaatcatcttctagtatagataaatctgcaggatgctctcagacacaggaaagttacaaatcacagataaggctttgggttgagaataaccatagtgtaggatcagatagtctttcaactggacaagcatctgacagtctttcaactggacagtgtaaaaggagtgatgaaataggtaaatcaaaccgaaagagatctagaccaggggagagtgcaagaccgaggcctaaagatcggcaaatgattcaagaccgtataaaggagcttcgtgaaatagtacctaacagtgcaaagtgtagcattgatacattactggagaagaccattaagcatatgcttttcttgcaaaatgttgcaaagcatgctgataagttgaagggatctggggagccaaagattgttagtcatgaagaaggtttgctcttgaaagataactttgaaggtggtgcaacctgggcctttgaagttggtacgcgatctatgacatgtccaatcatagtagaggatctcaatccaccccgtcaaatgcttgtggagatgctttgtaaagagagaggaatcttcttggaaatagctgatcaaattagaggtttagggttgactatcttgaaaggtgtgatggaagttcgtaaagataagatttgggctcgctttgctgttgaggcaaacaaggatgtaactcggatggaaatatttctttctcttgtccatcttctggaacctagcactgggagctctattttgtcagcaggtgttgagaacactagcctgccgcgcgatagtttctttccatcgtctattccagcctctggtttctccaactgcttgtga</cdnaseq> |
| Protein Sequence |
<aaseq>MAGAAPLRDSLRRLCTDVGWSYAVFWRATRAADSQRLKLVWGDG HYERAAGAPSISGFEAMDLLLKEKAAALRSGTGRGGGGGEGHAADGAAGHSHDRVDAL VHKAMAQQVHVVGEGVIGQAALTGLHRWIVHDIVDECEEEDEVLLEMKGQFCAGIQTI AVIPVLPRGVIQLGSTKMVMEEAAFIDHVRSLFQQLGSSTAVVPCGSFVQDSIMRTPF HKSLGVPTSSHSEDLAGGGNTYNDDMINHQFRHQKSPASTIQSFNPVQQFYAGPTFCR PVTIASRCDLFQPDHGSTFTLNSQSEDNRSTALLKNSVSHSKTSNDAFSHAFNPLNEP NVSISGRRECVSIEQHGSCRNGEMEITIGRTASSSCTGKTNIINKVDDLLSQDCLVGC QASNATSVNRKFQTMSIVDNTKLQDGSYAIPHAALVDSTQYSDCFQSLLGTIQGSSSS NSNAIHVDTSHNAVHGKSNFCPLGDRNAANSSDLAELLASPIPLELTGGNDLFDVLQL QQKPNGSNNSEVNNRQSMPYGSEQAVKSLIGCVDDDFTGLITEADPDQLLDAIVSKII TGHKQNVDTSASCSTTVAGFDRPLHSDCHLYTTGPSSGPIFCNFASVAPVAIKTEGPA AGSRQSSSSIDKSAGCSQTQESYKSQIRLWVENNHSVGSDSLSTGQASDSLSTGQCKR SDEIGKSNRKRSRPGESARPRPKDRQMIQDRIKELREIVPNSAKCSIDTLLEKTIKHM LFLQNVAKHADKLKGSGEPKIVSHEEGLLLKDNFEGGATWAFEVGTRSMTCPIIVEDL NPPRQMLVEMLCKERGIFLEIADQIRGLGLTILKGVMEVRKDKIWARFAVEANKDVTR MEIFLSLVHLLEPSTGSSILSAGVENTSLPRDSFFPSSIPASGFSNCL</aaseq> |
| Gene Sequence |
<dnaseqindica>221..330#639..878#982..1063#1376..1417#1502..1561#2237..3880#3980..4081#5063..5203#5294..5419#5593..5760#acacgccgtctctctcaaaacaaaatagaagcccaatacagccagtacaccaatccccccactcccggtcccctcggattccgcccatgccgccttcccgccgagagccctagccaagcccgctcgctgcttgctaacccccctccgcgcgcgctcacccgagtcctagggttccagcgagcggcgaggaggtagctcgttcgcgcgcgcgtcaaatcccatggcgggcgccgccccgctgcgcgactccctccgccgcctctgcaccgacgtcggctggtcctacgccgtcttctggagggccacccgcgccgccgactcccagcggttgtgagcgctctcactctgatccccttcccctccctgaattttctcccacacacctcagttcaactcgacttgctagttgctaccaccagtactggtagtgtactccgtagttgctgccgccgtggtggaattggctgcagaagaactgcgcccctttttttttttgcttcctaggactgcaataaatgccattgattgccacctttgccgcaaacaactggacaattggtccttccgatggcgggttcattgattttggctggagctgagttcgaattgcactttcgtttttggcttttgtgtggcaggaaattggtgtggggggatgggcactatgagcgggcggccggagcgccgtcgatctccggcttcgaggccatggacctgctgctcaaggagaaggccgcggcgttgcggagcggcaccgggcgcggtggtggcggcggcgaggggcacgcggctgatggcgccgcgggacacagccatgacagggtggacgcgctcgtgcacaaggccatggcgcaacaggtccacgtcgtgggagaagggtaatttggttttcgttactagtagtgttttgttttggatttgtgctctggttctatgggggtagtggtgtgatttggttctgctattgctgttgctggccagggtgattggtcaggctgcactgacagggttgcatcggtggatcgttcacgatattgttgatgagtgtgaggaagaagatgaggtaattgccttcgatattgccctagttggtggtgtagctcaaatttaaaatatacatgccttaagtacatttaggactaggagttacaatgtggattgattcataaattagttgctctgaacatatgatgtactgttcatcataccattccaaattagagctgctgtttcagaggacaaatcccctttaatttgttttctaggtcactctgcttgctttgctaactctatttgttgtatattttttttgtttttctgtagcgaatgagcttgaatttcgttgttacaactctttagttccatcttgatgcaggtattgctagagatgaagggccagttttgtgcaggaatacaggtctttatgctatttctttcatgttccattaccatcagcttccccatccctcgtgttcatctaaagatgcttgcttcttaacagacaattgcagtgatacctgtccttccacgaggcgttattcagcttggctccacaaaaatggtaagttacttactcattatggcctcgtgaaggtgctgagattacctactccctccgtcccaaaaaaactcaacttctacagtttgaattttgtcccataaaaaaccactttctaccatcctacctaccctcagcacgtaaaacgagaaattttattccttcaatactctttacctacctatcactcttactattttttcaatgattaaaggtatttttgtcattctccatctccactaatttcacctcgggatgctaggaatgtattttttgtgggacggagggagtatatcctagtcctttgcagaacagtaaccctttatttctgctttgctcacactttcctgtactaatgaaaagaaaaaactttactctatcacgaggttcaaaatatatggttttctttatatatatttgtctgcccccaacccccccttttttttcatttccacttctgtttcctacttgtagtgaacttgaaccgttctgctgacaattttgaacagtgtgcctccacaaattttgaaataaagattaggttaggggtcttattctatatcctatataatccgtcctggatcctgatgagctagcagaaacaacaaaaaatgttccttctgttttttgttttatttgttcaattcaaaattcagtggtttctattttgtttcaaaggttatggaggaagcagcatttatagatcatgtcagatctttgtttcagcagctgggtagttcaactgcagttgttccgtgtggttcctttgtacaagattcgattatgagaactccatttcacaaatcacttggtgtgcctacctcttcgcactcggaagaccttgctggtggtggaaatacttataatgatgacatgattaaccaccagttcaggcatcagaagtcaccagcctcgacaattcagtcatttaaccctgtacaacagttctatgctgggcctactttctgtcgtccagtaactattgcatcacgttgtgatctcttccaacctgaccatggatcaacctttactttgaacagtcagtcagaggacaatagatcgacagctttactcaaaaatagtgtttcacattctaaaacatcaaatgatgccttttcacacgcttttaaccccctcaatgaacccaacgtctccatttcaggcagaagagagtgtgtaagcatagaacaacatggttcttgccgtaatggagaaatggaaataacaataggccgcactgcttcttcaagttgtacaggcaaaacaaatattatcaataaagtggatgatttgctgagtcaggattgtttggtaggttgtcaggcaagcaatgccacatctgtgaacagaaagtttcagacaatgtccattgttgataatacaaagcttcaagatggttcttatgcaattccacatgctgcacttgttgactctacccaatattcagactgctttcaatcgcttcttggcacaatccaaggtagttcttccagcaattcaaatgcaattcatgtggatacttctcataatgctgtccatggaaagagtaacttttgccctttaggagataggaatgctgctaattcaagtgacttggctgaacttctggcatcgccaataccattagagttgactgggggaaacgatttgtttgatgtactgcaacttcagcagaagccaaatggttcaaataatagtgaagtaaacaatcgtcaatcaatgccttatggttcagagcaagctgttaagtctctgattggatgtgtggatgatgatttcactggattgatcacagaagctgatccagaccagctcctggatgcaatagtttcaaagataatcacagggcacaagcagaacgtggataccagtgcttcttgtagtactacagtggcaggctttgacagaccacttcattctgattgccacctatataccacaggaccatcatcagggccaatattttgtaattttgccagtgttgctcctgtagcaattaaaactgaagggcctgctgcaggttccaggcaatcatcttctagtatagataaatctgcaggatgctctcagacacaggaaagttacaaatcacagataaggctttgggttgagaataaccatagtgtaggatcagatagtctttcaactggacaagcatctgacagtctttcaactggacagtgtaaaaggagtgatgaaataggtaaatcaaaccgaaagagatctagaccaggggagagtgcaagaccgaggcctaaagatcggcaaatgattcaagaccgtataaaggagcttcgtgaaatagtacctaacagtgcaaaggtaacagcaccaacacatagatacccctatattgacctttaaaataaaacacattatttatcatatttttggtacttagatttctgtttgattaaacagtgtagcattgatacattactggagaagaccattaagcatatgcttttcttgcaaaatgttgcaaagcatgctgataagttgaagggatctggggagccaaaggtatgttgcatgatagtacttatttttagttatgtatcagtatcttgtatgaacaaggaacagccattaatgagagtgaacatctagcacaacagataatgtggtacttttccttgttatttagtactccatccatttcttattataagttgttttgacttttttctagtcaaacttttataagcttgatcaaatttatagaaaaatataataatatttccaatataaaataaacatactatcaaaatatttacaatgttatatttaatgaaactacttagatatgataagtgttgctaaatttttctataaacttggttaaacctaaagaagtttgactagaaaaaaaaagtcaaaacgacttataatatgaaacggagggagtagtgaattagctgagcccaaaacagacaatctctacattcttgatattcttcgtcgttccattttcgtcattagcttgctgctactgataattgatacaggtaaatgacaggcattacatgatcaacattcaaatttcctatggtccttttggagatctcctggagttaagagtttcagaaatcagcattgtcttgtttcagcaagtctttttggaacctgctgttcataatgaaatgtgattgaagttgttttaaagccaaagttgtcaataaatgactaatttatctgccaatagcccaataggtcaaaattttcgaaattgactgttttgtatttttcgatggtgacagacctttactatcataaatttgtgaagaatgctattaacataattttctttcttcaatgggtacttttcaagtaatcccattagatttctaacttgattagccccgatagatagaaaagaaaggtagatttcattgctatatttcattttgtcagagtgttttttatgaatacattagtaatctaactattaatttactcaagctaccctaatccgtgtgagattttcttgtttcatggaagcagattgttagtcatgaagaaggtttgctcttgaaagataactttgaaggtggtgcaacctgggcctttgaagttggtacgcgatctatgacatgtccaatcatagtagaggatctcaatccaccccgtcaaatgcttgtggaggtatttgctacttctctgttttcttagttcttgtaaatgctactgcacggtaattctgagtgatgattcgaacatgttgtaattgttcagatgctttgtaaagagagaggaatcttcttggaaatagctgatcaaattagaggtttagggttgactatcttgaaaggtgtgatggaagttcgtaaagataagatttgggctcgctttgctgttgaggtattaaatctttcctcgtctctcttcaacttagtaccagttcttatgactatcaatttttctgccaaaacaccaagcaaaatcacattctagcgtgatttgattatgaagctacaagtggtgtggactgagtagtatatcaaagtttaattaaaatattgaaatttctgcaggcaaacaaggatgtaactcggatggaaatatttctttctcttgtccatcttctggaacctagcactgggagctctattttgtcagcaggtgttgagaacactagcctgccgcgcgatagtttctttccatcgtctattccagcctctggtttctccaactgcttgtgacacgatgtaccatacctcagcaagtggagcgctgtgagtgggtaaagtttcacctgccgtgaccttttctccctgccttgttctagctgccacagatagttacgctgactccagtatcttgttgcctgtctccacggctgacgttgtggcaaattactgttcagtaagggagagatgtgtgttttgtcctaaccttaaactacatcgcagccagcctttgtgagggaagaagctttagcgtaggaaattgttgttttaggcaggctccacaagtgtaagaaatgcagtacataaatgattagagatttagagttaggatagcatcaggtttttctgctatgtaatatctgcattcatgtgcccatttggctctctggatctgctaacctggttgtgtatttgcagttcggtctttttcctctgttcagcaagtaccacttgaatgagtgcctcaccattttttactg</dnaseqindica> 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| External Link(s) |
