Os01g0869800

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Revision as of 05:12, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0869800| Description = Similar to Photosystem II subunit PsbS| Version = NM_001051464.1 GI:115441298 GeneID:4324933| Length = 2559 bp| Def...")
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Gene Name

Os01g0869800

Description

Similar to Photosystem II subunit PsbS

Version

NM_001051464.1 GI:115441298 GeneID:4324933

Length

2559 bp

Definition

Oryza sativa Japonica Group Os01g0869800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:39452871..39455429

Sequence Coding Region

39452956..39453153,39453270..39453386,39454766..39455257

Expression

GEO Profiles:Os01g0869800

Genome Context

<gbrowseImage1> name=NC_008394:39452871..39455429 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:39452871..39455429 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcagtcgatgctggtgtcgggagccaatggcacggtggccgccgcgagcaccagcaggctgcagcccgtgcggccgacgccgttctcgcggctcgtgctgtcgcagccgtcgtcgtcgctggggcgcgcggtgtccgtcaagacggtggcgctgttcggcaggtccaagaccaaggccgcgcccgcaagaaaggctgagccgaagccaaagttcaagaccgaggacggcatcttcggcacgtccggtgggatcggtttcaccaaggagaacgagctgttcgtcgggcgtgtcgccatgctcgggtttgccgcgtcgatcctgggtgaggccatcaccgggaagggaatcctggcgcagctgaacctggagacggggatcccgatctacgaggcggagcccctcctcctcttcttcatcctcttcaccctcctcggcgccatcggcgcgctcggcgaccgcggcagcttcgtcgacgaccagccggtgacgggcctcgacaaggccgtcatcgccccgggcaagggcttccgctccgcgctgggcctcagcgagggcggcccgctgttcggcttcaccaaggccaacgagctgttcgtcggccggctcgcgcagctcggcatcgccttctccatcatcggcgagatcatcaccggcaagggcgccctcgcgcagctcaacatcgagaccggcgtccccatcaacgagatcgagccgctcgtcctcttcaacgtcgtcttcttcttcatcgccgccatcaaccccggcaccggcaagttcgtcagcgacgacgacgaagagtag</cdnaseq>

Protein Sequence

<aaseq>MAQSMLVSGANGTVAAASTSRLQPVRPTPFSRLVLSQPSSSLGR AVSVKTVALFGRSKTKAAPARKAEPKPKFKTEDGIFGTSGGIGFTKENELFVGRVAML GFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGSFVD DQPVTGLDKAVIAPGKGFRSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEII TGKGALAQLNIETGVPINEIEPLVLFNVVFFFIAAINPGTGKFVSDDDEE</aaseq>

Gene Sequence

<dnaseqindica>86..283#400..516#1896..2387#agcacgaggcggcctgagctgaacaccgcatcagcagcagcaagcagctaatcgcgcacgtacgcacaccgcgacccggggcgagatggcgcagtcgatgctggtgtcgggagccaatggcacggtggccgccgcgagcaccagcaggctgcagcccgtgcggccgacgccgttctcgcggctcgtgctgtcgcagccgtcgtcgtcgctggggcgcgcggtgtccgtcaagacggtggcgctgttcggcaggtccaagaccaaggccgcgcccgcaagaaaggttggaatttggatggatgaatgcaagctaaactaagctaagctaagctcgcgtttgttttagtcttatgtttgatggtgctaactattttgtaacgtgtcaacgtgtgtatgtaggctgagccgaagccaaagttcaagaccgaggacggcatcttcggcacgtccggtgggatcggtttcaccaaggagaacgagctgttcgtcgggcgtgtcgccatgctcgggtttgccgtaagtagacctttcttggccttctagttatttggtatgcatcatttcttgccatcttggtacgtacctgtgcgttcgggtttgggttagctagctagcaagagcacaagcttaaacgtcaaaagttttgtggttaacggaagcactttacccgggagcgtcatcctttattctataaagggtcacatgttgcataggtagatttgcttccaactacttttttttaaaaaaaaattatagtttttgtcatatattttactttgaattttctgtgcacataaaaatgctatatttctccttagcaaatattgctacttttattttatttttcagtccgagttttgacagcgacattgtttaatctaggccagttagcaactcacatgtataccacacacataactaatgaattatctggatttagtaatataggtattgtaggttttaaaaaattcgtctttcgagcagatatattgtttaatgagtaaattttagagaactataaatttagtgactaaattatcagcttgttgtaacgttagtgacatattatatttcagtttaggaagaagaggggatttctgaaaaaaaaagaatgaatctccttcctgcagcaataacaaagaaaatcattataaatctacaactacgtgaacaacctaacgttaatcctgctgaaacgccgctcagtcggtgcacctgagtcaaaacctcattccaaggtagggcaaatggccatttcatcttcccctttgccctttttagcttgatgggttttaacctcggtgcaccaaccgagtgcgagtagcattctagtcggaacaaacggaacaattagtttcaggccgattttagttacaaactttttcttcaaacttttaacttttctatcacatcaaaactttcctatacaaataatcttacaacttttccgtcacatcgttccaatttcaactataaacttttaagtttagcgtgaactaaacacacccctagtggagtcgaaccaaagtgatgcacttagttgtcggccgatgtggcatgctgctacgatgcacatcttgacattgacgtgtcatgaagacatgttcctccatcttgccacactatatactacctctatgacacgcgatgtccatgtatcaataatattactaggatgtatatgatgttacagatttgtgatattttttttcttttattactgtaacaaactaaaactggttgtaaatgttgtagcacttagatagtttagtcactaaatttacagtgctttaaaatttactctcgtttaataatttgtatagtgtacatgcatgactagcacaatcgatcgttgagtcataccaacctgatgcaaaagcgctcaaactgtgcaggcgtcgatcctgggtgaggccatcaccgggaagggaatcctggcgcagctgaacctggagacggggatcccgatctacgaggcggagcccctcctcctcttcttcatcctcttcaccctcctcggcgccatcggcgcgctcggcgaccgcggcagcttcgtcgacgaccagccggtgacgggcctcgacaaggccgtcatcgccccgggcaagggcttccgctccgcgctgggcctcagcgagggcggcccgctgttcggcttcaccaaggccaacgagctgttcgtcggccggctcgcgcagctcggcatcgccttctccatcatcggcgagatcatcaccggcaagggcgccctcgcgcagctcaacatcgagaccggcgtccccatcaacgagatcgagccgctcgtcctcttcaacgtcgtcttcttcttcatcgccgccatcaaccccggcaccggcaagttcgtcagcgacgacgacgaagagtagaattacgaggatcgatcgatctaccgaggtttcgccgccattgttgtgcttgcgcatcattgagactttctttcaagtgtatatgtactgtgtacgtgtaggtgtaaagacgtaccttgtttaattagttgttaattaatgcccatggagaaaattaacgtgagatttagct</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0869800, RefSeq:Os01g0869800