Os01g0871600

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Revision as of 05:13, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0871600| Description = TGF-beta receptor, type I/II extracellular region family protein| Version = NM_001051474.1 GI:115441318 GeneID:432494...")
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Gene Name

Os01g0871600

Description

TGF-beta receptor, type I/II extracellular region family protein

Version

NM_001051474.1 GI:115441318 GeneID:4324944

Length

2136 bp

Definition

Oryza sativa Japonica Group Os01g0871600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:39551453..39553588

Sequence Coding Region

39551491..39551584,39551674..39551891,39551968..39552407,39552504..39553350

Expression

GEO Profiles:Os01g0871600

Genome Context

<gbrowseImage1> name=NC_008394:39551453..39553588 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:39551453..39553588 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggacaccgtcgccggagccgtcgattaccgtggccggccggcctcccgcgccgccaccggcggctggaagtcgtcggtgttcgtcatggccatggagatcgcggagaggttcgcgtacaagggcgtggcggcgaacctgatcacgtacctgaccgggccgctggggcagccgatggcgcgcgccgccgcgtccatcgacgcgtggaagggcgtctcccagatgctgccgctgccgctcgcctgcgtcgccgacgcctggctcggccgctaccgcgccatcgtcctcgcctccgtcatcttcgtcctgagcatgggcacgctgtcgatgtcgtcggcgttcccggtgtcgcgcgccggccacgtcgccgtcttctacgtggcgctgtacatggtggcgctgggcgagggcgcgcacaagccgtgcgcgcaggcgttcgcggcggaccagttcgacgagaaggacggcggggagtgcgccgcccggagctccttcttcaactggtggtacttcggcatgtgcgccggcaccgccgtcaccaccatggtgtccagctacgtgcaggacaacgtcggctggggcctcggcttcggcatcccctgcatcgtcatcgtcgtctccctcgccgcgttcctcctcggcacccgctcgtacaggttctacacagccaggacggccagccccgtcgcccgcgtcgccaaggcgttcttgacattgatcaagagctggagatcaaaccgtcgcaccaatccggcgagcggcggcaaaggagacggcgacggcgacgccggtgacctcgtggaggaggtgaagagcgtgctccggctgctgccgatatgggcgtcgtgcataatctacgcgataatcttctcccagacgtcgacgttcttcaccaagcaggcggcgacgctggaccggcggatcggccggagcttcaacgtgccgccggcggcgctgcagacgttcatcagcgtcagcatcgtcgtcttcatcccggtgtacgaccgcctcttcgtgccgctcgcccgccgctacacggggaggccgtcggggatcaccatgctgcagagggtgggcgccggcctcgccctctccctcgtcgccgtcgtcctgtccgcgctcgtggagacgcggcgcctccgcgtcgccgccggcgccggcatggcggacgcccccaaggcgcggctcccgatgagcctgtggtggatggtgccgcagtacgttctcgtcggcgtcgccgacgtgttcgccatgatcggcctgcaggagttcttctacgaccaggtccccgacgccgtgcgcagcctcggcctcgcgctgttcctcagcatcttcggcgtcggccacctcctcagcagcctcctcatctcggtgatcgacggcgcgacggcgaggcgcgccggcggcagctggttcgccaacaacctcaaccgcgcccacctcgactacttctactggctcctcgccggcctctgtgccgtcgagctcgtcgccttcttcctcttctcgcgggtgtacacctacaagaagaagggcaacgatgctgatggcaattgtgattacaggggagttgatgatgatggcatctgcgtgtaa</cdnaseq>

Protein Sequence

<aaseq>MADTVAGAVDYRGRPASRAATGGWKSSVFVMAMEIAERFAYKGV AANLITYLTGPLGQPMARAAASIDAWKGVSQMLPLPLACVADAWLGRYRAIVLASVIF VLSMGTLSMSSAFPVSRAGHVAVFYVALYMVALGEGAHKPCAQAFAADQFDEKDGGEC AARSSFFNWWYFGMCAGTAVTTMVSSYVQDNVGWGLGFGIPCIVIVVSLAAFLLGTRS YRFYTARTASPVARVAKAFLTLIKSWRSNRRTNPASGGKGDGDGDAGDLVEEVKSVLR LLPIWASCIIYAIIFSQTSTFFTKQAATLDRRIGRSFNVPPAALQTFISVSIVVFIPV YDRLFVPLARRYTGRPSGITMLQRVGAGLALSLVAVVLSALVETRRLRVAAGAGMADA PKARLPMSLWWMVPQYVLVGVADVFAMIGLQEFFYDQVPDAVRSLGLALFLSIFGVGH LLSSLLISVIDGATARRAGGSWFANNLNRAHLDYFYWLLAGLCAVELVAFFLFSRVYT YKKKGNDADGNCDYRGVDDDGICV</aaseq>

Gene Sequence

<dnaseqindica>39..132#222..439#516..955#1052..1898#accggagcaagctggtgtctcacctcttggactccggcatggcggacaccgtcgccggagccgtcgattaccgtggccggccggcctcccgcgccgccaccggcggctggaagtcgtcggtgttcgtcatgggtatgcttaaatcttccttgttttttagtgatttgagcgattggatgaatgtgtcgatgatgatcttgtgtttgtgttggtgcgtgcagccatggagatcgcggagaggttcgcgtacaagggcgtggcggcgaacctgatcacgtacctgaccgggccgctggggcagccgatggcgcgcgccgccgcgtccatcgacgcgtggaagggcgtctcccagatgctgccgctgccgctcgcctgcgtcgccgacgcctggctcggccgctaccgcgccatcgtcctcgcctccgtcatcttcgtcctggtcggtgcaatctccttcggttcttcttcccaaccatggcgcgtacactgagaattaattgtttccatggatgcagagcatgggcacgctgtcgatgtcgtcggcgttcccggtgtcgcgcgccggccacgtcgccgtcttctacgtggcgctgtacatggtggcgctgggcgagggcgcgcacaagccgtgcgcgcaggcgttcgcggcggaccagttcgacgagaaggacggcggggagtgcgccgcccggagctccttcttcaactggtggtacttcggcatgtgcgccggcaccgccgtcaccaccatggtgtccagctacgtgcaggacaacgtcggctggggcctcggcttcggcatcccctgcatcgtcatcgtcgtctccctcgccgcgttcctcctcggcacccgctcgtacaggttctacacagccaggacggccagccccgtcgcccgcgtcgccaaggcgttcttgacattgatcaagagctggagatcaaaccgtcgcaccaagtgcgtaaagaagaatagttcgatcgattttagtagtgtttttctttgtgtgttttgactgtttgtgcatgtcctgatgtgagacggtggatgcagtccggcgagcggcggcaaaggagacggcgacggcgacgccggtgacctcgtggaggaggtgaagagcgtgctccggctgctgccgatatgggcgtcgtgcataatctacgcgataatcttctcccagacgtcgacgttcttcaccaagcaggcggcgacgctggaccggcggatcggccggagcttcaacgtgccgccggcggcgctgcagacgttcatcagcgtcagcatcgtcgtcttcatcccggtgtacgaccgcctcttcgtgccgctcgcccgccgctacacggggaggccgtcggggatcaccatgctgcagagggtgggcgccggcctcgccctctccctcgtcgccgtcgtcctgtccgcgctcgtggagacgcggcgcctccgcgtcgccgccggcgccggcatggcggacgcccccaaggcgcggctcccgatgagcctgtggtggatggtgccgcagtacgttctcgtcggcgtcgccgacgtgttcgccatgatcggcctgcaggagttcttctacgaccaggtccccgacgccgtgcgcagcctcggcctcgcgctgttcctcagcatcttcggcgtcggccacctcctcagcagcctcctcatctcggtgatcgacggcgcgacggcgaggcgcgccggcggcagctggttcgccaacaacctcaaccgcgcccacctcgactacttctactggctcctcgccggcctctgtgccgtcgagctcgtcgccttcttcctcttctcgcgggtgtacacctacaagaagaagggcaacgatgctgatggcaattgtgattacaggggagttgatgatgatggcatctgcgtgtaaacctccgatttgtgctctgttgcttcattgctcgcgagtgtacacaaaaaaatctcgaattgttgtagtgcgttatcatatactctgatgatcaagtgatcagtaatcagagcaaagatggcgagctgatgagcatggtggaccgaggtgaacaaaattcatcggatgggcctgcgaacacattctcttcatgttgttgaacaatattccctccagtttcattttaattgacgttttg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0871600, RefSeq:Os01g0871600