Os01g0872500

From RiceWiki
Revision as of 05:13, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0872500| Description = TGF-beta receptor, type I/II extracellular region family protein| Version = NM_001185741.1 GI:297720616 GeneID:927049...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0872500

Description

TGF-beta receptor, type I/II extracellular region family protein

Version

NM_001185741.1 GI:297720616 GeneID:9270493

Length

2684 bp

Definition

Oryza sativa Japonica Group Os01g0872500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:39590046..39592729

Sequence Coding Region

39591759..39591787,39591888..39592407

Expression

GEO Profiles:Os01g0872500

Genome Context

<gbrowseImage1> name=NC_008394:39590046..39592729 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:39590046..39592729 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gcaagcaagcacactagacaggtggataggaggtactcaaagaaccctcgcggtatcacaacgttgcaaaggattggaattggattgattatctcagtaattctgatggttgtctctgcccttgtggagacgagaaggctcatggtagcaagagattttggcctggtggacaatcctgaagccacaatccccatgagcttctggtgggtggtccctcagttcatcctgactggtttggctgatatgttcacaatggttggcctgcaagaattcttctatgaccaagtaccagatggtttgcgcagtttgggccttgctttgtacctgagcatatttgggattgggagcttcatcagcagctttcttgtgtatgcaattgacaaggtgaccagcatgactggggatagctggttctcggacaatctgaaccgaggtcatcttgattacttctactggctattggctgtgctcagtgttcttggtttagctgcttatctacacttttcgcgagtgtatgtccacaagaagaagggcatctcagtacagtga</cdnaseq>

Protein Sequence

<aaseq>ASKHTRQVDRRYSKNPRGITTLQRIGIGLIISVILMVVSALVET RRLMVARDFGLVDNPEATIPMSFWWVVPQFILTGLADMFTMVGLQEFFYDQVPDGLRS LGLALYLSIFGIGSFISSFLVYAIDKVTSMTGDSWFSDNLNRGHLDYFYWLLAVLSVL GLAAYLHFSRVYVHKKKGISVQ</aaseq>

Gene Sequence

<dnaseqindica>1714..1742#1843..2362#ggaaaaaatatctgaacgggacggcgaccgagccaccatggacgcgggggcggagcccctcctgccgccgccggcttccgcggtggaccacctcggccgtccggcctcccgccgcacctccggccggtggctcgccgccctcttcatcatcggtacctccaaaaaactccccccgagaaaccagggcggcggcggcggcggcggcgagtcaacgagcaagcgccgccgcgctctcaccgcactctctctctctctctctcccgaactaatccgcgtgcagttgccgtcggtcgccatcgcaggcgtggagatctcggagcggttcgccttcggcggcatctccgggaacctgatcacctacctgaccggcccgctggggcagtccacggcgtccgccgccgccgccatcaacgcgtggaacggagctgcgctgctgctcccgctgctcggcgccgccgtcgccgactcctggctcggccgctaccgcatcatcatctgcgcctccctcctctacatcctggtatgtgcagtgcagtgctctcgctgtcggctgttcttgtgtggcttactcaactgccacttttatgatgaacctgtgacaatgctgaacatatgctactctgattctgtgagttcacctggaattttcagagtaattagctctgctaacaatgatttttcctgatatagtttctactttctccgggtaaaggattaaccataggggcaagtttgatgtgtttagatctgaagcacggaggaatttcaggcaataattcagctaaatattgtcctttccatccacatgatatatggctatcaccatcataatgggcatactatgcaattatgcatcactgtgataaaatgatactattcagtttctgtgtaagacaatgatattgtggagtttcttggatgttttttattatgtagatttctcactgaattgtatccacaatataggggcttggcatgctcacgctatcaccggttcttgtacctcatcaacaagcagaatctggagataatgcagataataatgcatcctccagtatggacattcatgtagctttcttctacttgtccctgtatatcgtggcctttgctcaaggtggccacaaaccttgtgtccaagcatttggggccgaccaatttgatgagaatgaccctgaagaatgtgcctcaaggagctcatttttcaattggtggtactttgggatatatggcggcaatgtcattacagtttcaatcttgaattacattcaagataacataggctggcagcttgggtttggaatcccttgcattgccatgtctctttctcttgcagtattcttgcttgggaccaagagttaccgcttctatcctctaagaagtaacacaagcctattcgaccaggttgggaaatcgcttctagcaaagatacgatggtggtgcgcatcatggtgttcaaagtatgtatgcaatgaaaccacccgcagagcccatccgttgcaaactacaaccttacttgctcgttcttcctctggcatgcagatcatcaggggatcttcactgcacccaagcatcatcatcccagggagatcacaatgatgcagaaaaggcatgctttcctgatgaagccaccgctgtgcttaaattgttcccaataggggcaacctgcctgatttacgcaattgtttttgcccagtggataacactgttcactaagcaagcaagcacactagacaggtggataggtaaagtacacataccagctgctgccctacaaagcttgatcagtgtgtcgatcgtcatctctgttcctatatatgaccgaatccttgttccacttactaggaggtactcaaagaaccctcgcggtatcacaacgttgcaaaggattggaattggattgattatctcagtaattctgatggttgtctctgcccttgtggagacgagaaggctcatggtagcaagagattttggcctggtggacaatcctgaagccacaatccccatgagcttctggtgggtggtccctcagttcatcctgactggtttggctgatatgttcacaatggttggcctgcaagaattcttctatgaccaagtaccagatggtttgcgcagtttgggccttgctttgtacctgagcatatttgggattgggagcttcatcagcagctttcttgtgtatgcaattgacaaggtgaccagcatgactggggatagctggttctcggacaatctgaaccgaggtcatcttgattacttctactggctattggctgtgctcagtgttcttggtttagctgcttatctacacttttcgcgagtgtatgtccacaagaagaagggcatctcagtacagtgaggatgtgtcaaaagatgctgaaaatgcattggctatcacatgttggttgttggcatatcactttcgaagaccttcaggcggtaaaaggcttgcagcttgcttatgctgctgtagtagtgctgtacagtgccttcaagagtgaatgcccgtacgatgcttttctgttgctgcttgaagccttgaacgattcgcatggagaaggagatctagcctaggtgccacagcaagtaaaaattgctgtggagaaatgttgattttcttttttcaggggtggttgtacaatttgtggactgtgaaagttatggcagttataaataatatt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0872500, RefSeq:Os01g0872500