Os01g0874100

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Revision as of 05:13, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0874100| Description = Deoxynucleoside kinase family protein| Version = NM_001051491.1 GI:115441352 GeneID:4324769| Length = 4143 bp| Defi...")
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Gene Name

Os01g0874100

Description

Deoxynucleoside kinase family protein

Version

NM_001051491.1 GI:115441352 GeneID:4324769

Length

4143 bp

Definition

Oryza sativa Japonica Group Os01g0874100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:39670621..39674763

Sequence Coding Region

39672250..39672321,39672397..39672774,39672903..39673361,39674200..39674610

Expression

GEO Profiles:Os01g0874100

Genome Context

<gbrowseImage1> name=NC_008394:39670621..39674763 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:39670621..39674763 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcacaggctcgtaccccgcgccgccgcctccttcctcggcgccccgccgctgctcaccacccaggcgggcccgcttctcgccgcgcgttcgggcccaccaaaccctagccgcctccgcctccgcctctccccgtggcggctgctgcgctcgaggagggggctctcctgctccgccgatgcggcgaagaggtgcggggatgatgatgccgaggaggatggcgagcagagcgtcgccgggggaggtgggagccgtccggtggtggataggaggcagagaagtcggggcgatgcggcgatggggagcggcgagctgctcgcgattcctggagtcgggccgcgcaacctgaggaagctcgtggacaagggattcgatggcgtggcacagctcaagcagctgtacagggataagttctttggcaagtccaatgagaaaatggttgagttcttgcaaagttctgttggcatcatacacaagaatcatgctgagagtataactttgttcattaaagaaagtgttgatgaagagctgaaaggaactgactcaccaaatgtttccaaaaataagaggctgaccttttgtgtggaagggaacatcagtgtcggaaaaactacattccttcaaagaattgccaatgagaccatcgaattacgtgaccttgtagagatagtgcctgaacctattgctaaatggcaagatgttggccctgatcacttcaacatacttgatgctttctatgctgagccacagaggtatgcatacactttccagaattatgtgtttgttacaagggtcatgcaagagaaggaatcttcaagtggcataaagcctctcaggttgatggaaagaagtgttttcagtgatagaatggtttttgttcgtgctgtccatgaagccaactggatgaacgagatggagatcagcatctatgactcctggtttgacccagtggtgtcatcactcccaggacttattccagatggttttatttatctaagagctagtcccgacacttgccacaaaagaatgatggttcggaaaagatctgaagagggtggtgttactcttgattaccttcgaggtttgcatgagaaacatgagagctggctgcttccttccaaaggacaaggtcctggtgtattatcggtcagtcaagttccagtccatatggagggctctttgcctccggatataagagaacgagtattctacttagaaggagatcatatgcattctagtatccagaaggttcctgctctggtcctcgactgcgaacatgacattgattttaacaaggatattgaagccaaacgacagtaa</cdnaseq>

Protein Sequence

<aaseq>MHRLVPRAAASFLGAPPLLTTQAGPLLAARSGPPNPSRLRLRLS PWRLLRSRRGLSCSADAAKRCGDDDAEEDGEQSVAGGGGSRPVVDRRQRSRGDAAMGS GELLAIPGVGPRNLRKLVDKGFDGVAQLKQLYRDKFFGKSNEKMVEFLQSSVGIIHKN HAESITLFIKESVDEELKGTDSPNVSKNKRLTFCVEGNISVGKTTFLQRIANETIELR DLVEIVPEPIAKWQDVGPDHFNILDAFYAEPQRYAYTFQNYVFVTRVMQEKESSSGIK PLRLMERSVFSDRMVFVRAVHEANWMNEMEISIYDSWFDPVVSSLPGLIPDGFIYLRA SPDTCHKRMMVRKRSEEGGVTLDYLRGLHEKHESWLLPSKGQGPGVLSVSQVPVHMEG SLPPDIRERVFYLEGDHMHSSIQKVPALVLDCEHDIDFNKDIEAKRQ</aaseq>

Gene Sequence

<dnaseqindica>2443..2514#1990..2367#1403..1861#154..564#gaagtcagcgaggtgatagcgccagcaaaaccctgaacccctccaaccaccgcagccgcaattccgccgccgccgcagccacgttggccggcggcctactgggggtgctggaggcgcgattgatgagccctgcagccgacgccgcgggcagcgatgcacaggctcgtaccccgcgccgccgcctccttcctcggcgccccgccgctgctcaccacccaggcgggcccgcttctcgccgcgcgttcgggcccaccaaaccctagccgcctccgcctccgcctctccccgtggcggctgctgcgctcgaggagggggctctcctgctccgccgatgcggcgaagaggtgcggggatgatgatgccgaggaggatggcgagcagagcgtcgccgggggaggtgggagccgtccggtggtggataggaggcagagaagtcggggcgatgcggcgatggggagcggcgagctgctcgcgattcctggagtcgggccgcgcaacctgaggaagctcgtggacaagggattcgatggcgtggcacagctcaagcagctgtacagggataaggtgtgtgtgtgtgtgaactgtgaaatattagcttgtactccttcagatcgataatacttatcgttttcaacaagagcacggtctctaggaaacaatcataacctttattttctactataatatatatagtatcaacaaatatatactttgattagagtactttttaaaactaatctgtgcatatggtctgacaaatattttagaaatgattcatatccaaaatcataacatcattcttgttcaaaacaataaatattatcaacctggagggagtagtactatatctgttttgttgttgtttattaaacatgtgagaaatatatatgcttagttgtagtcacttaagtcaagtactttgcatgcctttgcctacactcacatacctgtatgtaagtgagtcgactgacacataaggatactgtaggtgttgtgttgcgcttgcaagcaactgtgtgtttcgtggtcattggtgaattattgatccatgctgatgtccaattctgcatcataggagatcttgcattcttgtgctcgctaggagagatgacagaagaattggtgaaattgatgcccgtgttcaacatatatgtcaaattttgtgttgaaactgttttgggtgaaagttaattttcttgttgtaacacaactaagatcctgaaaagaaaaaccttagtgtcaggaaaagaacagagtacaattgtgggttctcctccaggcctgatttgtgatatttatttcattgtggcgaccttactgcacgaatattagatgtctttttccctctttatttatcctaatttccgcatacctgacactgacacttcatgagtttttgcagttctttggcaagtccaatgagaaaatggttgagttcttgcaaagttctgttggcatcatacacaagaatcatgctgagagtataactttgttcattaaagaaagtgttgatgaagagctgaaaggaactgactcaccaaatgtttccaaaaataagaggctgaccttttgtgtggaagggaacatcagtgtcggaaaaactacattccttcaaagaattgccaatgagaccatcgaattacgtgaccttgtagagatagtgcctgaacctattgctaaatggcaagatgttggccctgatcacttcaacatacttgatgctttctatgctgagccacagaggtatgcatacactttccagaattatgtgtttgttacaagggtcatgcaagagaaggaatcttcaagtggcataaagcctctcaggttgatggaaagaagtgttttcagtgatagaatggtaggtaaatctttccgtcaaagtccgcttggattgtgaatctagagctttgatacgattgcagtctttatatttcccattgttattttcttctcctagttaaaattttcaaagttaaatttttgaaggtttttgttcgtgctgtccatgaagccaactggatgaacgagatggagatcagcatctatgactcctggtttgacccagtggtgtcatcactcccaggacttattccagatggttttatttatctaagagctagtcccgacacttgccacaaaagaatgatggttcggaaaagatctgaagagggtggtgttactcttgattaccttcgaggtttgcatgagaaacatgagagctggctgcttccttccaaaggacaaggtcctggtgtattatcggtcagtcaagttccagtccatatggagggctctttgcctccggatataagagaacgagtattctacttagaaggagatcatatgcattctagtatccagaaggtaatgttctccttagtttcaaaagaaattagtaaggtttgtttggttaaatgaacgaaatttcttctcaatcaggttcctgctctggtcctcgactgcgaacatgacattgattttaacaaggatattgaagccaaacgacagtaagttttgcaaaacctttattttgtccataggacaattgtcaaccttatattattttcttctagtgctagcctgtatttatttcataagaaaagaacatctaagaacatctagtgctagcctgtatttatttactagttcattcttcttaacaaacacaaacattatatttattccaaaattgaactcaaccctgttcgtatagtggctgcgttctagtcacacggtaggtctaccttgatctttattcatagtggtcaagatttcaaagttcaactttacaactgttgaaatgctagaaagactataggagcacaaaaaagaaatgcttttcttgtatgtggcttcaagttaagagggatcagagtacaactattatcctatagctcatgcatcattcttcctttgtgtatggcatacatgtattttgtagtacttggtatgaagtttctttctgctagtttagttgcatgacacttcttgcttaaattccttacatcgaatgtttagtaccaactcaactgctagcaacatatccgtatatgacatggtttatgacatattaggaactcaattattttgtttttgcacttttcattatagttcatttatatgaagagtcttgtacttaaaatgttattaaactgctcctaaggtctctttccactatagcactacaacctgaccaatttattgtaagaacattggaactgatgctaattgcggtagcttgatgagataattcagtatgcccatgggttcattttttggatatcttttaggggagagtttggttcagctttggtacttaaaacagaaaatattttgcaaaatcaacaaacgtttatgtgctgttgctatatctctaatttagtatgtgactattgttccttgactttatgtggccctagttttggtatccatgcatttcccggcctgatttggtatccaatacgctctgtttcatctgttgtagtattatttttctgccgaaccttatgatggagtttatgtatttatgctattcattcccgcatttttgcgatgcccattttctttagagaatgctacatacttttggatcttttctatagcttcagctgaacatcctgtggtgcccttgagttcaaattttctgtgtctgatatttccatcttgtccatgaagatatgcccgacaagttgcggagttctttgaatttgtaaagaaaaagaaagaagatccttctgcggagtcaagtggtggtgataagagtaccaacaaacagattatgcttccccacagaggtggtttgtgggttcccgaaggtaaccctttaccaggatctgctctgaactctctggatttcagaagagcaatgtcttccttcctctcagcttaggggccaacatcccatatgaaatagccaattcctggccaccatatgttccagtattacaaattctgaatggtccatcgtcacatctgcgtctcagatagccttgaactgacgaccctgtaaatgctgaagatttattgaaatataggtttctgtatagcgctagccaatgctgtacaatagtagtatcaaactcgtccatgtaaatgttcactcttcttcgtcgtcaataaaaggcgtccctgtaaatgatt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0874100, RefSeq:Os01g0874100