Os10g0520600

From RiceWiki
Revision as of 08:45, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0520600| Description = The start codon is not identified.| Version = NM_001071620.1 GI:115482983 GeneID:4349139| Length = 4331 bp| Definit...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os10g0520600

Description

The start codon is not identified.

Version

NM_001071620.1 GI:115482983 GeneID:4349139

Length

4331 bp

Definition

Oryza sativa Japonica Group Os10g0520600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:20590696..20595026

Sequence Coding Region

20590865..20591095,20591485..20591688,20592093..20592263,20594056..20594255,20594722..20595025

Expression

GEO Profiles:Os10g0520600

Genome Context

<gbrowseImage1> name=NC_008403:20590696..20595026 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:20590696..20595026 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>agatcagacgtcaccactactgactcgtcttcctcccacctcggtcgcgccccacgattaactccgccccttctcgcctcttccttcgtgctaactactaccgccgccgccgccgccgccgacgccaaatccccaaaccctagctccgccctcggcctcgccgccgcccgccgccatggcggagaccgtcgacgacaaggtcagctacttccaggcggtcaccggcatctccgaccacgacctctgcaccgagatcctcgccgcccacaactgggacctccagctcgccgtctcctccatcacccggacacccctgccttctgcggtggctgcctctgcgctgagccagtcgcggccttcatagatgagaacttcgttgcgtggggtggtagcatcaggaggactgaagggttcaagatgagcaacagcctgaatgcatcgaggttccctttctgcgcggtggtcatggcgtctacgaaccagagaattgtgttgttgcggcagattgaggggcccaaatcacctgaagagatgataacaactcttcaaggggcagttgaagaatgcagtgcatcactcgttgctgctaggattgatgctgaagagaggctaaacaatcaacgcttgcgtgaggaacaagatgctgcttatagagctgcacttgaagctgatcaggccagggaacgccaacggagagaggagcaggaaaagcgtgaaagagaggctgcagaggctgagagaaagcgcaaagaagaagaggaggctcaagaaagggctgcccaagaagcagctgagaaagaagccgctcttgcaaggaggagacaagagaaggccatggctcttggagcagaacctgagaaaggaccagatgttactcgagttcttataagatttccaactggagagcgcaaagaaaggagattcaacagttccactaccatcacttcactgtatgactatgttgattctttggactgcttgaaagcagagaagtacagcctagtttcgaacttcccgagggtgacatacggtccagaaaaactctcccaaacgctggaggaagcaggtttgcatccgcaggcgagcttgtttattgagatagaacaatga</cdnaseq>

Protein Sequence

<aaseq>RSDVTTTDSSSSHLGRAPRLTPPLLASSFVLTTTAAAAAADAKS PNPSSALGLAAARRHGGDRRRQGQLLPGGHRHLRPRPLHRDPRRPQLGPPARRLLHHP DTPAFCGGCLCAEPVAAFIDENFVAWGGSIRRTEGFKMSNSLNASRFPFCAVVMASTN QRIVLLRQIEGPKSPEEMITTLQGAVEECSASLVAARIDAEERLNNQRLREEQDAAYR AALEADQARERQRREEQEKREREAAEAERKRKEEEEAQERAAQEAAEKEAALARRRQE KAMALGAEPEKGPDVTRVLIRFPTGERKERRFNSSTTITSLYDYVDSLDCLKAEKYSL VSNFPRVTYGPEKLSQTLEEAGLHPQASLFIEIEQ</aaseq>

Gene Sequence

<dnaseqindica>3932..4162#3339..3542#2764..2934#772..971#2..305#aagatcagacgtcaccactactgactcgtcttcctcccacctcggtcgcgccccacgattaactccgccccttctcgcctcttccttcgtgctaactactaccgccgccgccgccgccgccgacgccaaatccccaaaccctagctccgccctcggcctcgccgccgcccgccgccatggcggagaccgtcgacgacaaggtcagctacttccaggcggtcaccggcatctccgaccacgacctctgcaccgagatcctcgccgcccacaactgggacctccagctcgccgtctcctccatcaccgccaacccctcctcccccgacccggccccctccgcgcccctgcccccgctggcaccgagggaggcggatttggtcgcgccgcacctgcctccgcctccgcagcagcagcagcagcagcagcagccggggatcgcgtggaagctcgtgacgctccccttctacgtggtctccggtggggttgggctcatcgccggttcgatccgtctcggtgcctgggtcgccggaggtgtgctgtctcgctccctctccatcctcggcctcgcgcagggcgggggcggaggaggcgaccggcttctcgagctgcccccgtcggcggccgaggcggctgacttcgtggcggagttcgagcgcgagttcggcgccggccgtggcccccacttcgtcgccgagggcttcgcggatgcgttgcagcgtgcgcagcgcgagtacaagcttctcttcgtgtacctgcactcccctgatcacccggacacccctgccttctgcggtggctgcctctgcgctgagccagtcgcggccttcatagatgagaacttcgttgcgtggggtggtagcatcaggaggactgaagggttcaagatgagcaacagcctgaatgcatcgaggttccctttctgcgcggtggtcatggcgtctacgaaccagagaattgtgttgttgcggcaggtatggtgttgatgtgctatttataatgtctgagaaatatgttggatttgttatctaagatcagctgctgtgctccttagtttatgtggtttctgactgtggattatcacattgactatagtgtagagaggcgtttgtgtgaaacaattcaatttgttgggggtttagtccggcaatgctttccattattagatcaacttgttatgcaccatttgttacaaagttctcatctgtattaattacgatgttttatttggttacgacatgccattcctgcgctttgagaacattgagatgcagttgcgagagttaggccattgttatgcatacagacccggttgccatttacagtaggattaactttgagtatagttgcttcctatatcatagttgtttcagcttattgttttcgaagtgtttatgttgttataacttaaaatccattttgtggatttggtatgtctgcaatatgctttcttaaattagatgtgtcatatgttctgtaagtgattttgtttcatgaattagagttgttgtgactttgggagctgattttgtttctcattgatttgcttggttaggatgagatttagatgggagtcttagtggaattgttttatatatactcaaattcctagtccccaaactattttatgggattaaatggtgagagttgggcattcaaatttctaagccaaaatcccctcactttaagaactacaatcccttatctcattcccacccaccaactatcatgtgcaaaacatgatataggacactctgtcatttactcatttacatcatccttgataattgcattagctggaattttgtgcaatactcatggatttcagcaactactgctgatgatactagaaatttggtaattatcttttcctcttaaagtaccctagaaaactaagttaatacatatcccaaactggagttttatctgaattgaatgtgtgaagggtgctttggggaaaaaatgttttaccaatgagcaagacaaattccaaattttcatcattaccttttcattttagattttttaggcattctcctttatgttcttttaaatttgtacacattcacaaaactttcctgtagataaaatttcacacataatattatggcagtatcgaattctgtttgcttgactactgcactgtgttgaaactagcaggtgatatattttgttgttctagattgttacgttgataggtgagagtaaaagatcaggttttgttcactgtgctgtttaacaaatatatgcattgttattaaaacttgacttgctgtacttgcttttctctgataccccattttatttaatattgtagtccatagaattcgtagtgcgtgtattctctatcaacaatacattgtgcaataatataatcatccagcttctgtcaaggcagtgttgctgcttactcgcaagtaatcctactgtttgttagcaccactcattagtatttgaatgctattgccaggacttatgttaagtccttaacgatgttttattctagatcaaaatcgtgcaaacatcttgtttccttcccagcatttgtgcatcatgcgtgattatatttatacccctagagctcatcagctcaaggcagttactatgccccacatcgttactggcataacattagtcattaatggatccaaagctctgtactcttttttcttgtcgtttcaaagtaccttagtattttttttctgctaccgtacagttatatagttgatcaatattgctcatgcattttcattttgtgttccgaagattgaggggcccaaatcacctgaagagatgataacaactcttcaaggggcagttgaagaatgcagtgcatcactcgttgctgctaggattgatgctgaagagaggctaaacaatcaacgcttgcgtgaggaacaagatgctgcttatagagctgcacttgaagctgatcaggtatgctaaactctggaggccatttctgttcttatattattgatgcgctttagtacaagagtatgcatgctgtgtaatatgggttcaacgatagggtctggggtagttacatgacaatggggaactaatttatctatatattacaccttgttttcattttcttcagctaagggcattgtaccgttctaaggacagtatttgtgcatggtaatgggcacactaatacattagttagtgaactgattaaagcagaccatagaacggtgcatacagattttctgccagtatttgaatgttttgaagcaccaacttattgagcaattccttctctctttttttttggtaaaattaccagtctaggggaaaacgattttggttggtcctaatggatgttgttgtaccaggccagggaacgccaacggagagaggagcaggaaaagcgtgaaagagaggctgcagaggctgagagaaagcgcaaagaagaagaggaggctcaagaaagggctgcccaagaagcagctgagaaagaagccgctcttgcaaggaggagacaagagaaggccatggctcttggagcagaacctgagaaaggaccagatgttactcgagtatgttcacattctttgtccatcttccttatcaacctgttatgatcttattctaggataatgtgctgacaagttacaaccacatttgtctacttttgatgactaaatacaatacagtagcagctatgctagattgcttttattagtgatgcagaaggcttcagtaagcttattcatctctgtggagctacatgatagctttgaacgcaacacatcatgactaattttttgatttgtaccttcacaaaccatgcattctacgtataggtggtttgtttagtagtaattttctttagatgttagcacagatatttctaaactgctgatgatctgcgttgtatctgcaaattctttggaactaataaaggaccgtgctgatgattttgtaggttcttataagatttccaactggagagcgcaaagaaaggagattcaacagttccactaccatcacttcactgtatgactatgttgattctttggactgcttgaaagcagagaagtacagcctagtttcgaacttcccgagggtgacatacggtccagaaaaactctcccaaacgctggaggaagcaggtttgcatccgcaggcgagcttgtttattgagatagaacaatgaggtgttaagtttgtaagttctgaacggaaacctgcaggtataggtgctccttttacaatttatttaacaacagtgaggaacttcttgtatgacattatactgagaaatgtcttcgatgcaaatcttcttttgtgcttctcatttatattcaataaattcaccttcaccc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0520600, RefSeq:Os10g0520600