Os01g0874700

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Revision as of 05:13, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0874700| Description = contains InterPro domain(s): IPR001251, IPR000348, IPR008273, IPR009038, IPR011074| Version = NM_001051493.1 GI:11544...")
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Gene Name

Os01g0874700

Description

contains InterPro domain(s): IPR001251, IPR000348, IPR008273, IPR009038, IPR011074

Version

NM_001051493.1 GI:115441356 GeneID:4324771

Length

3070 bp

Definition

Oryza sativa Japonica Group Os01g0874700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:39704714..39707783

Sequence Coding Region

39704977..39706290,39706730..39706854,39706946..39707087,39707190..39707450

Expression

GEO Profiles:Os01g0874700

Genome Context

<gbrowseImage1> name=NC_008394:39704714..39707783 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:39704714..39707783 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggaggagccacagccagaggccgcgcccgccgcggtggcggcgacgaccgaggtggcggtggcggagaaggcgcccgtggaggcggagaaggagaagaaggtggaggaggagacgccggcggtggaggccgaggcgaaggaggagaagaaggatgaggcggcggcggcggcggcggcgggaggtgatgaggccggggcgatagaggggaccggatcgttcaaggaggagagcaacctggtggcggacttgcctgacccggagaagaaggcgctcgatgagttcaagcagctgatcgccgccgccctcgccgcctgtgagttcaatctgcctccccctccgccgcctcccaaggcgaaggttgaagccgccgttgaggagaccaaggcggaggagaccaaggccgaggaggaacccaaggctgaggagccggccaaggaggaggagcccaaggccgaggtggcggcggcggcggcggcgccgccggaggcaggaaccgaggagccgaaggcggaggcgtcgtccgaagaggccaagaccgaggagccgaaggccgaggcggcggccgacgagccggccaaggaggagtccaaagctgaggcggcgccggctgaggaagccaagccggccgagccggagccggaggagaagaccgtcgtggtcaccgaggaagaggcggccaccaagacggtggaagcgatcgaggaaaccgtcgtgcccgctgctgctgcgcctgctgccgccgccacggaggaagccgcggcgccggaaccggaggtgcaggcggcggcggcgcctgagcccgtgttgatctggggcgtgcccctggtaggcgacgacgagcgcaccgacacggtgctcctcaagttcctgcgcgcgcgcgagttcaaggtgaaggaggccatggcgatgctcaggtcggccgtgctgtggcgcaagcgcttcggcatcgagtccctcctcgacgccgacctcgccctgccggagctcgacagcgtggtgttctaccgcggcgccgaccgcgagggccaccccgtgtgctacaacgtctacggcgaattccaggacaaggacctgtacgagaaggcattcggcgacgaggagaagcgggagcgcttcctcaagtggcgcatccagctgctggagcgcggcatcctgtcgcagctcgacttctcgcccagtggcatctgctccatggttcaggtcacagacctcaagaactcgccacctatgctcggcaagcaccgcgccgtcacccgccaggccgttgctctgctccaggacaactaccccgagttcatcgccaagaaggtgttcatcaatgtgccatggtggtatctcgctgccaacaaaatgatgagcccgttcctcacgcagcgtaccaagagcaagttcatttttgccagcccagccaaatcagctgagaccctcttcagatatatcgcaccagagcaagtccctgtccaattcggaggtctcttcaaggaagatgatcctgagttcaccacctcagacgccgttaccgagctcactatcaaaccttcatcgaaagaaaccgttgagattcctgtcactgagaattccacgattggatgggagctccgggtgcttggatgggaggtgagctacggagcagagttcactcctgatgccgagggtggatacacagtcatcgtgcagaaaacgaggaaggtgcctgcaaatgaggaaccaatcatgaaaggcagcttcaaggttggcgagccaggaaagattgtgctaacgatcaacaaccctgcatcaaagaagaagaagctcctctacagatccaaggtcaagagcaccagtgagtccgtttga</cdnaseq>

Protein Sequence

<aaseq>MAEEPQPEAAPAAVAATTEVAVAEKAPVEAEKEKKVEEETPAVE AEAKEEKKDEAAAAAAAGGDEAGAIEGTGSFKEESNLVADLPDPEKKALDEFKQLIAA ALAACEFNLPPPPPPPKAKVEAAVEETKAEETKAEEEPKAEEPAKEEEPKAEVAAAAA APPEAGTEEPKAEASSEEAKTEEPKAEAAADEPAKEESKAEAAPAEEAKPAEPEPEEK TVVVTEEEAATKTVEAIEETVVPAAAAPAAAATEEAAAPEPEVQAAAAPEPVLIWGVP LVGDDERTDTVLLKFLRAREFKVKEAMAMLRSAVLWRKRFGIESLLDADLALPELDSV VFYRGADREGHPVCYNVYGEFQDKDLYEKAFGDEEKRERFLKWRIQLLERGILSQLDF SPSGICSMVQVTDLKNSPPMLGKHRAVTRQAVALLQDNYPEFIAKKVFINVPWWYLAA NKMMSPFLTQRTKSKFIFASPAKSAETLFRYIAPEQVPVQFGGLFKEDDPEFTTSDAV TELTIKPSSKETVEIPVTENSTIGWELRVLGWEVSYGAEFTPDAEGGYTVIVQKTRKV PANEEPIMKGSFKVGEPGKIVLTINNPASKKKKLLYRSKVKSTSESV</aaseq>

Gene Sequence

<dnaseqindica>264..1577#2017..2141#2233..2374#2477..2737#ccgcctcgttcgcttctctcttccccttccttccattccagctagcaaccgcaagtccgcaacgcgagaaacgcaggcagcaaagcaagcgaacccaaagctggcctcgcactcacactgacagccttgctctcctcctccccctatatctctcctccctccctcgccgcctcctccccaatcctccaaaccctaatcccccacctcactctctctcgatctcgtgctctcctcctttcgcgagcgcgttctttggaggggagatggcggaggagccacagccagaggccgcgcccgccgcggtggcggcgacgaccgaggtggcggtggcggagaaggcgcccgtggaggcggagaaggagaagaaggtggaggaggagacgccggcggtggaggccgaggcgaaggaggagaagaaggatgaggcggcggcggcggcggcggcgggaggtgatgaggccggggcgatagaggggaccggatcgttcaaggaggagagcaacctggtggcggacttgcctgacccggagaagaaggcgctcgatgagttcaagcagctgatcgccgccgccctcgccgcctgtgagttcaatctgcctccccctccgccgcctcccaaggcgaaggttgaagccgccgttgaggagaccaaggcggaggagaccaaggccgaggaggaacccaaggctgaggagccggccaaggaggaggagcccaaggccgaggtggcggcggcggcggcggcgccgccggaggcaggaaccgaggagccgaaggcggaggcgtcgtccgaagaggccaagaccgaggagccgaaggccgaggcggcggccgacgagccggccaaggaggagtccaaagctgaggcggcgccggctgaggaagccaagccggccgagccggagccggaggagaagaccgtcgtggtcaccgaggaagaggcggccaccaagacggtggaagcgatcgaggaaaccgtcgtgcccgctgctgctgcgcctgctgccgccgccacggaggaagccgcggcgccggaaccggaggtgcaggcggcggcggcgcctgagcccgtgttgatctggggcgtgcccctggtaggcgacgacgagcgcaccgacacggtgctcctcaagttcctgcgcgcgcgcgagttcaaggtgaaggaggccatggcgatgctcaggtcggccgtgctgtggcgcaagcgcttcggcatcgagtccctcctcgacgccgacctcgccctgccggagctcgacagcgtggtgttctaccgcggcgccgaccgcgagggccaccccgtgtgctacaacgtctacggcgaattccaggacaaggacctgtacgagaaggcattcggcgacgaggagaagcgggagcgcttcctcaagtggcgcatccagctgctggagcgcggcatcctgtcgcagctcgacttctcgcccagtggcatctgctccatggttcaggtcacagacctcaagaactcgccacctatgctcggcaagcaccgcgccgtcacccgccaggccgttgctctgctccaggacaactaccccgagttcatcgccaagaaggtactaatgatttcactgccattgattagtgctatttgcgtagctatttctttgcaactgaagcaattttagagtagctatttgtgtttgtaggattcaattcttaattaatgcatttgtagtttaacgttgcaagtgaatgattgggctaaaactttgttctttaggcaatgtgataaaggttggaacttttagggtgtcactgctagctcttttgcaccaattttagtactggcctgagttgactgttgtcttttggcgtgtgctttgttgttaatcatagcgcgagctgggatcttttccttttgttctatctttttctggtacgatcagatgagggagttctgtaaggctgttaatataccaatttgtagttcattccaatagtttcagttaatgaaatgtgatcaaatgtttttggttgggtcatggtgtgcaggtgttcatcaatgtgccatggtggtatctcgctgccaacaaaatgatgagcccgttcctcacgcagcgtaccaagagcaagttcatttttgccagcccagccaaatcagctgagaccctcttcaggttttgcacacagaaaccattgagaatcaatgcttttggtattttcgatcttccaagtttaatttgctcatgtattgctatctaaacgcagatatatcgcaccagagcaagtccctgtccaattcggaggtctcttcaaggaagatgatcctgagttcaccacctcagacgccgttaccgagctcactatcaaaccttcatcgaaagaaaccgttgagattcctgtcactgaggttggtccttgtgtacgtgccaaattacctagaacaatctttagatgcactgatcgctgatactgattatttccctatatatgaaatttgcaacctttgtagaattccacgattggatgggagctccgggtgcttggatgggaggtgagctacggagcagagttcactcctgatgccgagggtggatacacagtcatcgtgcagaaaacgaggaaggtgcctgcaaatgaggaaccaatcatgaaaggcagcttcaaggttggcgagccaggaaagattgtgctaacgatcaacaaccctgcatcaaagaagaagaagctcctctacagatccaaggtcaagagcaccagtgagtccgtttgaggttgcagctgcctgatcaccagattcaccacaatggcagctgaactcattccctgatggaagagaaaccttttggttttggttctttaatttattggttttgctgttttggttcacattttgtatttgtttaattaaaaaccaaagtgagcttgtttttgtgatagttggaaggagagggttgatatgatataatgacatcgtgatggtttgttgagggcagaggacaaaaattgtggaaggactgaagaatatctgctgctttgtatatctgtctgtacattgcatctctggattctcatggacatgttaaatttagaagtacttgtcatc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0874700, RefSeq:Os01g0874700