Os01g0875300

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Revision as of 05:13, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0875300| Description = UspA domain containing protein| Version = NM_001051497.1 GI:115441364 GeneID:4324775| Length = 2505 bp| Definition ...")
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Gene Name

Os01g0875300

Description

UspA domain containing protein

Version

NM_001051497.1 GI:115441364 GeneID:4324775

Length

2505 bp

Definition

Oryza sativa Japonica Group Os01g0875300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:39738772..39741276

Sequence Coding Region

39738772..39739221,39740345..39740472,39741129..39741276

Expression

GEO Profiles:Os01g0875300

Genome Context

<gbrowseImage1> name=NC_008394:39738772..39741276 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:39738772..39741276 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagcggtggcggggagcacttcttgcggcagctgagcgcgagcaacgggggatacggtggtgcggcgcagtatcagatggggcgaggggtggtggcggaggaggaggtggagctcggcggaggaggcaggaggaggggctcgaagcggtggtcgaagaagagggcggggaggggcgggtacggcggcggcggcggggggaagggggacgcggccgcggccgcggcggcggcggcggcggtggccgggaggaagcgggtgatggtggtggtggacgacacctccggggccaagcacgccatgatgtgggcgctcacccacgtcgccaacaagggggacttcctcacgctgctccacgtcctcccgtacgccggcgccggcagaggcgaggagaccccctccctcgccaactccctcggcacgctctgcaaggcctgcaggccagaggtggaggttgaagcacttgtgatccaaggaccaaagctggccactgtcctcagccaagtgaagaaattggaggcgtctgtgcttgtgctcagccaatccaagccatcccatttctgttggttgagttgcatcctgcggagcagcagcgaggagttcgtcgagcaatgcatcaaccaggctgagtgcctgacgttggcagtgaggaagcagagcaagggcgtcggcgggtacctcatcagcacacggtggcagaagaacttctggctcctggcttga</cdnaseq>

Protein Sequence

<aaseq>MASGGGEHFLRQLSASNGGYGGAAQYQMGRGVVAEEEVELGGGG RRRGSKRWSKKRAGRGGYGGGGGGKGDAAAAAAAAAAVAGRKRVMVVVDDTSGAKHAM MWALTHVANKGDFLTLLHVLPYAGAGRGEETPSLANSLGTLCKACRPEVEVEALVIQG PKLATVLSQVKKLEASVLVLSQSKPSHFCWLSCILRSSSEEFVEQCINQAECLTLAVR KQSKGVGGYLISTRWQKNFWLLA</aaseq>

Gene Sequence

<dnaseqindica>1..450#1574..1701#2358..2505#atggcgagcggtggcggggagcacttcttgcggcagctgagcgcgagcaacgggggatacggtggtgcggcgcagtatcagatggggcgaggggtggtggcggaggaggaggtggagctcggcggaggaggcaggaggaggggctcgaagcggtggtcgaagaagagggcggggaggggcgggtacggcggcggcggcggggggaagggggacgcggccgcggccgcggcggcggcggcggcggtggccgggaggaagcgggtgatggtggtggtggacgacacctccggggccaagcacgccatgatgtgggcgctcacccacgtcgccaacaagggggacttcctcacgctgctccacgtcctcccgtacgccggcgccggcagaggcgaggagaccccctccctcgccaactccctcggcacgctctgcaaggcctgcaggccagaggtagcgtatacgcgtatacgtacatcatacgtgcatgatgtttctttttttttctttattttttttagagggatgcatgtcattttgtgtgctgtttttacttttgtgctctaatatgtgttttcaaattacaaaattttaggcgcttcgattagagaatcatgtgtctgatctctgctgtctagctttggtcattctggatttggaagcatctgcttggaggcaatgcacgagggaattattactgctagctcacaaagaattagaaaaaaaagcttttgttagtgtactggctcatgagaacttgactaaactgaaggataaaaataaagtataatttactgtacggtttgtagagttatcaatcctgaaggtcacctgagagggatagttgtaaagtattatttgttgggggacaatcatacagtagatcagatcagatatcagaacatacatgaaaaggggatcgtattccacttttcatggatgaacggatcttgcatcttggcaggccaaaaaggttcgagtctttgataaaagttaaaaagtactacctccgttccataataagtgcataagtgcagctccgttccataataagtgcagccataagtttccgcgctcaactttaatcgtccgttttatttgaattttttttataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgacttatgtttttaaattttttcaaaaattttttaataagacgaacggtcaaagttgggcgcggaaaaccatggctacacttattttgggacggaggaagtaattagaaaagaacaatttgtggggctcatgctcatcccaggttctaaaaccattagtaaaatgcatcagtaaaatcctacctaaaccggccgtaaacaatggcattatgagatcatatcatcattccttccttgatttgcttgcattgcttgaatcaaaagtcagcacttcaatgtagtagtgtactactagtagtacatccctgcgtaagagcaacagtaccgtgcatgaagccatgaactattcctttgtcctactatagcatgtgcaaaggagggctcatacgaaatgggtgtgaatgtggtaggtggaggttgaagcacttgtgatccaaggaccaaagctggccactgtcctcagccaagtgaagaaattggaggcgtctgtgcttgtgctcagccaatccaagccatcccatttctgttggttgagttggtaagcatttctcacctcctaccactgtagctctatctttctcatccctattggatgtgttaaaaatgtgaggctcaggtcaactatgaatggaaactggcggggagaatatagtatcatggtgtcagtcagtccctagtgttattttaaaacaatgcccagattaatgcatatggctaggttccaatagaaacctttagttgtacatcattttttatatcgtacaagtatcagtttatcaggatacataattaccactagatctaaatttatggggagagatctggtcatcttttatgataagcaggcccactaacaagcaatgagtaaactgtttgggaaataatcctccttcaccaccgttcaatagcagggtcccctgcctttcgggaaaataacaccaggcagcagcctccatgtgctatccataaatcacagatgctttccttgtccttttttggtcacaactcaaccaaatgaaagcaagactcctacacttcactcacctaatttttgctacgttcacgtggacaatgtaacaatcaccatcaccaacacattgaagttgagtcaggaaaagttacttttcatcttgtcgtaaactatagctatggtccttgttgagcaaatgcaaatgtctgcctgcgattttacagcatcctgcggagcagcagcgaggagttcgtcgagcaatgcatcaaccaggctgagtgcctgacgttggcagtgaggaagcagagcaagggcgtcggcgggtacctcatcagcacacggtggcagaagaacttctggctcctggcttga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0875300, RefSeq:Os01g0875300