Os01g0875400

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Revision as of 05:13, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0875400| Description = Ubiquitin domain containing protein| Version = NM_001051498.1 GI:115441366 GeneID:4324776| Length = 4880 bp| Defini...")
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Gene Name

Os01g0875400

Description

Ubiquitin domain containing protein

Version

NM_001051498.1 GI:115441366 GeneID:4324776

Length

4880 bp

Definition

Oryza sativa Japonica Group Os01g0875400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:39742714..39747593

Sequence Coding Region

39742933..39743175,39743259..39743433,39743526..39743589,39743668..39743782,39744850..39744994
,39747259..39747569

Expression

GEO Profiles:Os01g0875400

Genome Context

<gbrowseImage1> name=NC_008394:39742714..39747593 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:39742714..39747593 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggaggcgtcctcgtcctcggcggcggcggtcccgccgctggacccggaggcgattgccgccgtggcggaggcagcgccaccggaggagatgacgctggtggcgaagtggaaagggaacgactacacggtgcgggtggtcggggacgacacgctgggggagctgaagcggcgcatctgcgaggtcacgggggttctccctaaacggcagaagctgctctaccccaagttcaagctcaacgagtgcaaggactccgagctcatctcctccatccccttcaagcccaacgtcaagatcaacatgatcggcactgttgaagatgaaatatttgtggaccaagaagatgatccagagatactcaatgattatgaaataggccagaatgaagttactgctatcaaggataaagatgtctacaagcaaaaactaaaacggcgtgcaagtcaatataagatcaagatattgaatccatgccgcaaagggaaaaaactgcttgtcttagacattgattatactctattcgaccataggtccgctgctgagaaccctatcgaattgatgcgtccatatctacacgagttcctctctgctgcatattcagaatatgatatcatgatatggtcagcaactagcatgaaatgggtggggatgaagatggaccaacttggagttcttggcaaccccaactacaaaattactgctcttatggatcacttggcgatgataactgtgcaatctgaaaacctgtcagaaaagaaaacttttgattgcaagcctcttggtgtcatttgggctcagttccccgagtacaatgaaacaaacacaatcatgtttgatgacctcagaaggaactttgtcatgaatccacagaatggtcttgtgatcaaaccatacaagaggacccattcaaacagaggcactgatcaagagctggtgaagcttacacaatacctgcttaccattgcagagctagaagatttgagcaagcttgaccatagtgcatgggaatccttcacagaagaaaatgccaagagacgcagacacaggtag</cdnaseq>

Protein Sequence

<aaseq>MAEASSSSAAAVPPLDPEAIAAVAEAAPPEEMTLVAKWKGNDYT VRVVGDDTLGELKRRICEVTGVLPKRQKLLYPKFKLNECKDSELISSIPFKPNVKINM IGTVEDEIFVDQEDDPEILNDYEIGQNEVTAIKDKDVYKQKLKRRASQYKIKILNPCR KGKKLLVLDIDYTLFDHRSAAENPIELMRPYLHEFLSAAYSEYDIMIWSATSMKWVGM KMDQLGVLGNPNYKITALMDHLAMITVQSENLSEKKTFDCKPLGVIWAQFPEYNETNT IMFDDLRRNFVMNPQNGLVIKPYKRTHSNRGTDQELVKLTQYLLTIAELEDLSKLDHS AWESFTEENAKRRRHR</aaseq>

Gene Sequence

<dnaseqindica>4419..4661#4161..4335#4005..4068#3812..3926#2600..2744#25..335#cttgtttcttcagaccccaagccgatggcggaggcgtcctcgtcctcggcggcggcggtcccgccgctggacccggaggcgattgccgccgtggcggaggcagcgccaccggaggagatgacgctggtggcgaagtggaaagggaacgactacacggtgcgggtggtcggggacgacacgctgggggagctgaagcggcgcatctgcgaggtcacgggggttctccctaaacggcagaagctgctctaccccaagttcaagctcaacgagtgcaaggactccgagctcatctcctccatccccttcaagcccaacgtcaagatcaacatgatcgggtaagcgcaataccctccttcctcctcgaaccctacacctccatgtgccgtcccgtgtctactctcgctcgtgttctgcagatacctgactgcgaaaacatttggttactcgtcgttgaactggatgattagctcgtaattcgggggaatgttggatttcggttggtgattcgaccgatctattcgatccagtggcatcgcgttgttcatgatttgaaattgttgtttatttcctatgggttctcagatgctgggaacggtatttgaagtttgggattgacatccagtagcagtatgtggagacgtttgtctattagattagtttcacgaatggacgtggagtaacgtggagtgactgaggttatgtggtgttcatctgagaggaaggaataaccttctcaaaccttgattcctcacagtttgaacacattcgggagtgctgtagttgcaatggaatcatccgtggagcatgtgaatttattgttaaattgatgcattagtgttaccaatggctgcaaaatgattatggattagtgggttttttaaatagaaaaacagcaggatgttgtttttcttaaatctctagaggcccgttatcgtttcttttctgatgtgtttctgatagtgatgcgaaattggatggtggttgatgttatatgttcagttggcatgtttttggtggtgattgaagaacctgaatgatgatccaggggcaaactagttagtctgtttgtacagtaccatttaagcctatgatctgtgttgatgtgttctaatctgaaagtgtgctttgttgaacttgaactttaaagaaagtctgtttcgagtttggacaataccatttaggccgggagatcagatcatttaccgtttagatggaaaattgaggatttaccctcctatgccaatgacatgtttgagtcatctaaggtcatttacatgtgggtcagcagggtgaatcctcaatttcaatcaaaacggagggtatatggtcaaaattttcgtttagggtatagatctgtgtcctattctgaaagtttgctttgttgaacttgaaaccctacctatggacataattcgattagcttccttttattctgttttataatgtgaagttactcattatgctttgccacttatgtgaatgttatttcttggtaaaatttgcaaactaatttatatgtcagtatgttcttgactgttaaatgcttatgtgctatgtggtttgagccactgatgtaatccgatattctgcacatggttggatcatgattcgttattgctaactaaactcatgctttgcaacagatctcaagtaaatataccagaagagctaaacatgaaaagttgtatatgtttctcagagaacatatatacttccaaccataaatcaatgagataaccctattacagcacatgtgcacaaatgagctatccacaaaaacccaattagttcaagaggttccttattatccgcatgaatcgcaccaactcaaggaatagtattgtgatggcagactcaccaccaccaccactaatatgtcccttttatgtagtagagatcttaattatacacagtaaggttgtatagctggcaaattgtaaattgggtgtagattgattattattgttcattcatgtgataaccttctaatggtgtagaagactaggaggatcttatgctatttatattgggacggctgttacaaagaactttcatttgacacacctttttgtttctaatattttgtccactccatagtacttccatttgtaggatcagtagtggatgcttggatggtgagaaaaatgcatgtaattgcgctaattatgaacacttgtaatgtagtattcctctttagggaaaaaaacatgccttatggagggcttgcagaggaagtttgtgaagcatttaccttgaatatactttggtgtgacacttgtggtttttctagtgaggcactgtgaggtgagagctttgatacctttcctgattcagatctgtttttatcatttccaagatgaaccatgggagatggacctcctcttaatattgatttagcactctggctttactcaacagtcaacagcagcatattcaagttttcagggttttttttttcaatggttcaaatcactcttttgctgcgttacatctcaaagataatggttctgtttgaaaatttgaatttgtacaccatgtacttatgtcccatttgaaggtgctttctatttactttgcattaattttgtatatctttcagcactgttgaagatgaaatatttgtggaccaagaagatgatccagagatactcaatgattatgaaataggccagaatgaagttactgctatcaaggataaagatgtctacaagcaaaaactaaaacggcgtgcaagtcaatataaggtatattcccgtgtcattttcgtttcctgtcatatgcttcttccttatccatgcttttatggttccacaatatcctgtttgttctgacagcctgagccacatcttagtgcttgttcctttgacctacatgaagttggtaatatttcctagcgtggttcaggttgttagtatgtcagcatgtcgattctagaaatattttgtggtttcacttgctcatagaccaaagccataacagtgacgagggttattctctctcttgtgtggtgctgattgaagccatagccagaaacttcttttcttagcaatgatccataagtctaagcccctaggggaggtagtttttgtggatagagattttggacatttgtgggcgctatagcgattttcaggttactgcaatgtgctactatgttccacaagttatcgtcaattcctcatctagctatgtagatgtactagttttacttctaattgttgttttgcatgcttgggatttgtagtagatgtcttattgtgctgaaaggtatcatataggcacttggagtagaatagtaagtagtttttgaaattcctctataggctggcatctgctctattacccactatctgttgtcaccttgtctatttgctactccctccgtttcatattataagttgtttgatttttttcctagtcaaactttatcaagtttgaacaagtttatagaaaaattcagcaacatttaaaatatcaaattagtttcattaaatctaggattgaatatatttagataatatgtttgttttgtgttgaaaatactattatatttttctataaacttggtcaaacttaaagaagtttgattagaaaaaaagttaaacgacttataatatgaaatggagggagtattttttatctgactctggcgtgtgtcttctacttaatgtaataatctactactcatacaagtatagtgctttttgatgctgttggttgtgaaagcaggtcactgatctaattgctatcttgttaaatgtacatagacgtcgaatttattatttatcttttcttcttcctatttctgtagatcaagatattgaatccatgccgcaaagggaaaaaactgcttgtcttagacattgattatactctattcgaccataggtccgctgctgagaaccctatcgaattgatgcgtccatgtaagggcatctcccatcaccactattatgttttccaatgagctgtcatgaggattgatgccatattcctcttcacagatctacacgagttcctctctgctgcatattcagaatatgatatcatgatatggtcagcaactaggtaagcgttttgtgatcctgatctatcagttaactggttatggttgtgctgtgaaacaagtaaagaaaaatacaattggcctttgaatgcagcatgaaatgggtggggatgaagatggaccaacttggagttcttggcaaccccaactacaaaattactgctcttatggatcacttggcgatgataactgtgcaatctgaaaacctgtcagaaaagaaaacttttgattgcaagcctcttggtgtcatttgggctcagttccccgaggttagtagtggcgtggtactgtgaatttgtgactgattctcattgaattatttgctcattgcttctgtttctttcatatgcagtacaatgaaacaaacacaatcatgtttgatgacctcagaaggaactttgtcatgaatccacagaatggtcttgtgatcaaaccatacaagaggacccattcaaacagaggcactgatcaagagctggtgaagcttacacaatacctgcttaccattgcagagctagaagatttgagcaagcttgaccatagtgcatgggaatccttcacagaagaaaatgccaagagacgcagacacaggtagttttttctcagtgtattgatcagcaggaaagaaaagttcgccctcctttttgatcactgctattaactgcatagactagaatatcttggattgaccatgacaaccacaatgctacttagaatactctacatatatccctgcgttcgatctgcacaaaaacatttccaaactgcaacagttattttttaaccttcctgtgtgcatttcaacgttaaacct</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0875400, RefSeq:Os01g0875400