Os01g0876200

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Revision as of 05:13, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0876200| Description = Similar to Chloride channel protein CLC-c (AtCLC-c)| Version = NM_001051502.1 GI:115441374 GeneID:4324780| Length = ...")
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Gene Name

Os01g0876200

Description

Similar to Chloride channel protein CLC-c (AtCLC-c)

Version

NM_001051502.1 GI:115441374 GeneID:4324780

Length

2749 bp

Definition

Oryza sativa Japonica Group Os01g0876200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:39774822..39777570

Sequence Coding Region

39776977..39777453

Expression

GEO Profiles:Os01g0876200

Genome Context

<gbrowseImage1> name=NC_008394:39774822..39777570 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:39774822..39777570 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtggcggaggccgagctggcggaagagcacggcggccttggccagcgacatgttctccactacggtgtacggcgagcggttggcgatcgggtggaggtcgacgtacatggccatctcctcctcggtgaggtccaggtcgtcgacggtgaggcccttgcccgacccgggcttggcgaagtcgaacggcgcgagcttgcggaacacctcggcggcgccggtcttgacgcggtcggcggtgaaggtcttggcgcggaggagcacgaggaggtgggagcgcagcacgaggccgcacagctccggctccggcgcgaacggcgcgtcctcgatcaccgggaacccgttgtgccccgtgcggcgcagcgtgtccacgacggtgccgacgctctcgacgctggagaaggcgatgagcggcgcggacacgacgtcgccggcgaccaggctgcgcatgcacggctcggcgtgcgcctccaggtaa</cdnaseq>

Protein Sequence

<aaseq>MWRRPSWRKSTAALASDMFSTTVYGERLAIGWRSTYMAISSSVR SRSSTVRPLPDPGLAKSNGASLRNTSAAPVLTRSAVKVLARRSTRRWERSTRPHSSGS GANGASSITGNPLCPVRRSVSTTVPTLSTLEKAMSGADTTSPATRLRMHGSACASR</aaseq>

Gene Sequence

<dnaseqindica>118..594#accggcggcctctgcaaaatcatcatcaagattcagatgcaaaaatggcggaaaagcatgtaggattcagctaagttggtaagctctattacccccggcgtcctcggcacgacgcacatgtggcggaggccgagctggcggaagagcacggcggccttggccagcgacatgttctccactacggtgtacggcgagcggttggcgatcgggtggaggtcgacgtacatggccatctcctcctcggtgaggtccaggtcgtcgacggtgaggcccttgcccgacccgggcttggcgaagtcgaacggcgcgagcttgcggaacacctcggcggcgccggtcttgacgcggtcggcggtgaaggtcttggcgcggaggagcacgaggaggtgggagcgcagcacgaggccgcacagctccggctccggcgcgaacggcgcgtcctcgatcaccgggaacccgttgtgccccgtgcggcgcagcgtgtccacgacggtgccgacgctctcgacgctggagaaggcgatgagcggcgcggacacgacgtcgccggcgaccaggctgcgcatgcacggctcggcgtgcgcctccaggtaagggagccccttcatgcgcaccatctgctcgtacacgcccttgttgaagcagtcggccaccgtcttggagacgagcagcaccagcatgatgagcggcagcagcaggaggtcgttggtgagctccaggaggatgacgcacaccgacaccgtcatccgcatcgtcccgccgaggaaggacgccgcgccgagcagcgcgaagagccccgtgtcgaggccggtgagcacgccgagcagcttcccgagcagccggccgaacgacgcgccggagaggatcacggggatgaagaggcccgacggcacggccacgccgtaggtgaccaggccgagcgagtagacggcggtgaagaacgcgagcagcatgggcacgccgaactcgctctccgtgccgccgctgaagaggttgcggatggcgtcgtcgttggtgttgaggaacagcgacgccatggcgttgtactgccccggcggacaccggaagttcttgaagttgccggagcggccgatggtcgggcagtggccgctggcggccagctccggcgggcatggcgtgcacgccgtcagccacggcaagccgaaggagcagcacgaggtgaccagcgagatgaccaccgtaagaatgatcttgtacggcgcgcctttcctgcaaaattaacccaaatgcatgcaaagctcagtgatcatcttgccgaagttgcaacagatgattgaaaattttgaaatgcattgattcgggtgaagattactcgttgatgtagctatacacacgaaggatccgattgaggaggaagttgaagagtgctccaagtagcccgccgacgatggcgagcagcacaaccgcggcgagatccatggtggtgtatgatgtcacctgtgaacttacgtcgaacatgatcagccctcctttcccgaacaggccacagttgccgctgcggcagtactctattagggaccttagcaccattgccgccactgctgtcgtggagaatgtcctccagagaagcgcgctccgccacctgagaaagcgcaaaggttaatagtttcaattgagtaattgggatgtggattttcaattgacaatgtgcaaagattacaattgacaattcaaaagacatgctgggtgtactgtagcatatctggcaaaatggtatttcagatgcaacttggtttttattttggggaattaccaggatgttgcttcttcaagtgcgaagaggacaccgccgacaggggcgcggaaggctgctgtaactcctgctgcagctccacaggtgatcagatccctgcggtccaaatcattcttgaagtacctgagccaattccaagtgaagccatacttgcgcgacccgccttgtcctagaaaggaggcaacacaagccccagtgtgcaccataggaccttccttgcccagcacaaacccagcagacaccccaaatatagacccaacaatctgcaagtacaaagctcaccaacatgatccaatgcacatcgaaaatcggtgtcgtgatgatcaaattagagttagaaagattgaatgtttcaatcaggatcatacataccttgacgaagagggtactgggcgctaagatggacggcgcgtcgacaccattcagataggccttcacctcaggtatgccagatccggcagccgctgggccaaagtaagcgcacaatgctgcagcggctgctgccaacattgcattgcagctgataaaccatagaaaggccgccttgtacctaaagtaccaagaaatgttgagctcaaaaaaaatttttgactggttttgttcatcaattgcaatgaaccgcattggaagggtggactctacctgttctggagcattagattggtcgtcaggagcagcttgaacccggctatgttttcgacggcaatgttgttgaagaatcctattaggccaactattaatccaacaagaagtgctaggacccatttaaggatctgatagtggaagatttgcaatttcccccttgatctccagtcctgcttgtacacttcattctccacaagtctgtgtcatcattagtcaatatggaaaatccattaattaccacacttacattgatcacctcacttgtaaaattgtagtcaaactcaaactagtgttcataataacatactttgggttgtcccttgtaaaatt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0876200, RefSeq:Os01g0876200