Os01g0876400

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Revision as of 05:13, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0876400| Description = Galactose-binding like domain containing protein| Version = NM_001051504.1 GI:115441378 GeneID:4325081| Length = 286...")
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Gene Name

Os01g0876400

Description

Galactose-binding like domain containing protein

Version

NM_001051504.1 GI:115441378 GeneID:4325081

Length

2861 bp

Definition

Oryza sativa Japonica Group Os01g0876400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:39783168..39786028

Sequence Coding Region

39783224..39783455,39783714..39783799,39783885..39785230,39785568..39785657,39785684..39785753

Expression

GEO Profiles:Os01g0876400

Genome Context

<gbrowseImage1> name=NC_008394:39783168..39786028 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:39783168..39786028 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>agaggaaggcggcggcggcggcgaaggaggaggaggaggaggcaggggtgggcgtggctaccgcggcggctgtacggcttctccgtctcgcttgtcgtcgcctgctgggtcgtcctgctcctgctcaaccccctcgtcggtcatgggaacggtcaacgagatgaagggatttttgcggatgaaggaagctctgatccctcgtttgattctgttgagcctaccttgagcgaaggctctgttgattcagttgtacagcaggagaatggggaaaatcatgcgttgccaggtgatagctgtgctaaacccgatgaaaatcatgtgctttctgaagagacactgctggagaaagatcagctttgctccaatgatgaggcacagggtgatagcatggatgctctgcccaaggataacgttgatcagggtgagaatcttccacggacagatgatgattctgtagttcatccagagggggaggtggagagcgaaggtgttccaagaccagcaaggttatcacgagttgtccctcctggtcttgatgaattcaagacacgagcgattgcggaaagaggaaagggtgtccctagtggtcaacctggaaatgtgatccacagaagggagcctagtgggaagttgtacaattatgcctcggcagctaaaggggctaaggtcctggaattcaacaaggaggccaagggtgcttctaacatcctagacaaggataaagacaagtatctccgcaatccttgctcagcagaggggaagtttgtcattatagagctgtctgaagaaaccttggtagatacaatcgcaattgcaaattttgagcactattcttctaacttgaaagaatttgaaatgctgagcagtctgaattatcccacagatagctgggaaacactcgggagattcactgttgcaaatgccaagattgctcagaattttacttttcctgagccaaagtgggctagatatctgaaactcaacttgcttagccattatggttccgaattctactgcacgctcagtatgcttgaagtgtatggaatggatgcggtggaaaagatgctggagaacttgattccagttgagaataaaaggctggaacctgatgacaaaatgaaggaaccagtcgatcagcaaacacaattgaaggagcccactgagggaaaagaatcctcacatgaacccctggatgaagatgagtttgaactagaagatgataaactaaacggtgattcatcaaagaatggtgctcatgatcaagttaccgagacaaggccaattcaggctggcaggattcctggagatacagttcttaaggtactaatgcagaaggtgcaatctcttgatgtgagcttttctgtcttggagcggtatctagaagaactaaatagcagatatgggcaaatttttaaggattttgatgctgatattgataccaaagatgcactcttggagaaaatcaaattggagctgaagcatcttgagagaagcaaagatgactttgcgaaagaaattgaagggattctctcatggaaactagttgcttcctcacagttaaaccagctactcttggataatgtcataatcagatcagaacttgaaagatttcgggaaaagcaggctgacttggagaatagaagctttgctgtaatattcctgagttttgtttttggatgtttagcgattgctaagctgtctataggcatgatatttaatacctgtagattatataattttgaaaaattcgatagggtaaaatctggatggcttgtgttgctgttcagcagttgcattatagcctccattttgataatacagtga</cdnaseq>

Protein Sequence

<aaseq>RGRRRRRRRRRRRRQGWAWLPRRLYGFSVSLVVACWVVLLLLNP LVGHGNGQRDEGIFADEGSSDPSFDSVEPTLSEGSVDSVVQQENGENHALPGDSCAKP DENHVLSEETLLEKDQLCSNDEAQGDSMDALPKDNVDQGENLPRTDDDSVVHPEGEVE SEGVPRPARLSRVVPPGLDEFKTRAIAERGKGVPSGQPGNVIHRREPSGKLYNYASAA KGAKVLEFNKEAKGASNILDKDKDKYLRNPCSAEGKFVIIELSEETLVDTIAIANFEH YSSNLKEFEMLSSLNYPTDSWETLGRFTVANAKIAQNFTFPEPKWARYLKLNLLSHYG SEFYCTLSMLEVYGMDAVEKMLENLIPVENKRLEPDDKMKEPVDQQTQLKEPTEGKES SHEPLDEDEFELEDDKLNGDSSKNGAHDQVTETRPIQAGRIPGDTVLKVLMQKVQSLD VSFSVLERYLEELNSRYGQIFKDFDADIDTKDALLEKIKLELKHLERSKDDFAKEIEG ILSWKLVASSQLNQLLLDNVIIRSELERFREKQADLENRSFAVIFLSFVFGCLAIAKL SIGMIFNTCRLYNFEKFDRVKSGWLVLLFSSCIIASILIIQ</aaseq>

Gene Sequence

<dnaseqindica>2574..2805#2230..2315#799..2144#372..461#276..345#gatggagccacctcaaaagcccccgcccatccaccgccacgcggcgatccaacccccttccccttcgccggcgcagcatcggacctcgccgccgcggcggttcttctgagcggggccggggcggggcggcagctggggattcgtcccgtgccccgtgctcttcctctgcgtgggccggggcggagggagggaggggaagtcggtggtgaggtggcgtgttgtgtggcgcagatgtgagggcggaggaatgcagaggtcgcggagagcccttctgaagaggaaggcggcggcggcggcgaaggaggaggaggaggaggcaggggtgggcgtggctaccgcggcggccgccgggaggaggcggcggcggcggctgtacggcttctccgtctcgcttgtcgtcgcctgctgggtcgtcctgctcctgctcaaccccctcgtcggtcatgggaacggtcaacgaggtacgatttcgttttggccttcgcggaatcaatttttgatcgatcgtgcttggtgggtggttgcgtggtggtgcgaacggtggttggggaagatggtcgttcgctgaatcggccgaacgtgaatcgcaatattacgcggttacaacatagatctatatatgcgcgtttcatttctgaattctgaataaacatcatggttttttgatgtcctgatgaaatttccgctttaattttaccatttttgaaagatatcgcatgtcaataattttcaaattgacgttatgcgtatttctcggtgtcgattgggctcatgttcggtgctgtctgatttctgcagatgaagggatttttgcggatgaaggaagctctgatccctcgtttgattctgttgagcctaccttgagcgaaggctctgttgattcagttgtacagcaggagaatggggaaaatcatgcgttgccaggtgatagctgtgctaaacccgatgaaaatcatgtgctttctgaagagacactgctggagaaagatcagctttgctccaatgatgaggcacagggtgatagcatggatgctctgcccaaggataacgttgatcagggtgagaatcttccacggacagatgatgattctgtagttcatccagagggggaggtggagagcgaaggtgttccaagaccagcaaggttatcacgagttgtccctcctggtcttgatgaattcaagacacgagcgattgcggaaagaggaaagggtgtccctagtggtcaacctggaaatgtgatccacagaagggagcctagtgggaagttgtacaattatgcctcggcagctaaaggggctaaggtcctggaattcaacaaggaggccaagggtgcttctaacatcctagacaaggataaagacaagtatctccgcaatccttgctcagcagaggggaagtttgtcattatagagctgtctgaagaaaccttggtagatacaatcgcaattgcaaattttgagcactattcttctaacttgaaagaatttgaaatgctgagcagtctgaattatcccacagatagctgggaaacactcgggagattcactgttgcaaatgccaagattgctcagaattttacttttcctgagccaaagtgggctagatatctgaaactcaacttgcttagccattatggttccgaattctactgcacgctcagtatgcttgaagtgtatggaatggatgcggtggaaaagatgctggagaacttgattccagttgagaataaaaggctggaacctgatgacaaaatgaaggaaccagtcgatcagcaaacacaattgaaggagcccactgagggaaaagaatcctcacatgaacccctggatgaagatgagtttgaactagaagatgataaactaaacggtgattcatcaaagaatggtgctcatgatcaagttaccgagacaaggccaattcaggctggcaggattcctggagatacagttcttaaggtactaatgcagaaggtgcaatctcttgatgtgagcttttctgtcttggagcggtatctagaagaactaaatagcagatatgggcaaatttttaaggattttgatgctgatattgataccaaagatgcactcttggagaaaatcaaattggagctgaagcatcttgagagaagcaaagatgactttgtatgcttttctattcacatgtatttttctttcttcttttgttggcattactttctttgccttatcatatattcattcatttcaggcgaaagaaattgaagggattctctcatggaaactagttgcttcctcacagttaaaccagctactcttggataatgtcataatcaggtttgtatagttaccgttttcccttttgtgtttttactctattctcgtattcgagatataggtctatcccgagttggcttccgtgtttgcttgtcaaaaagtgttttccttaattcttttttctgttagctaattatagcttctaatcgtactattgagagttcagataaactacttgaactgctttggtattaatgaataattatgtcggcttgggatgattataactttgtgattcatgttatggtgtctctgcagatcagaacttgaaagatttcgggaaaagcaggctgacttggagaatagaagctttgctgtaatattcctgagttttgtttttggatgtttagcgattgctaagctgtctataggcatgatatttaatacctgtagattatataattttgaaaaattcgatagggtaaaatctggatggcttgtgttgctgttcagcagttgcattatagcctccattttgataatacagtgatgtacctatcaactccatataattgcggctgcgctttgtaattgcctgaggtgtct</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0876400, RefSeq:Os01g0876400