Os01g0878000

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Revision as of 05:13, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0878000| Description = Conserved hypothetical protein| Version = NM_001051513.1 GI:115441396 GeneID:4325090| Length = 1425 bp| Definition ...")
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Gene Name

Os01g0878000

Description

Conserved hypothetical protein

Version

NM_001051513.1 GI:115441396 GeneID:4325090

Length

1425 bp

Definition

Oryza sativa Japonica Group Os01g0878000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:39857414..39858838

Sequence Coding Region

39857570..39857737,39857818..39858126

Expression

GEO Profiles:Os01g0878000

Genome Context

<gbrowseImage1> name=NC_008394:39857414..39858838 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:39857414..39858838 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcgggaggtcgaggccgtggccaggggacccgtcgccggcgcctccgcagccgccggtcgtcgccgcagcggcggacgcgggcggcgaggcgtcgacgtcgctcagggacttcggcacgtcgatggacgccatctcgttcgggttcgcggccaccgccatcctcgtctccatgttcctcctcatggccatcttcgagcacctcatcaagccccacgtcttcccgcccctcgccagcgcggcgctccgccccgcgcgccgccgccacggcgtctctcccgccggcaagctccggagccctcccatggtggagacggtgctgcaggcggcggacctgtcggtgttgatgccggggcaacggtacccgacgtacctggcgcagccggcgccgcttccgccggcgccgtgcccgagggaaggggtgcactggccgccgcacgaccacgacgtccaccactcctacatgccgccatga</cdnaseq>

Protein Sequence

<aaseq>MSGRSRPWPGDPSPAPPQPPVVAAAADAGGEASTSLRDFGTSMD AISFGFAATAILVSMFLLMAIFEHLIKPHVFPPLASAALRPARRRHGVSPAGKLRSPP MVETVLQAADLSVLMPGQRYPTYLAQPAPLPPAPCPREGVHWPPHDHDVHHSYMPP</aaseq>

Gene Sequence

<dnaseqindica>1102..1269#713..1021#gcagcactcctttttgttactccaagctttttcctgtagttttcttctcctctctccacattgccaccaccaaatcagctgagatctcacttttgattcggggactgtctttaagtagaggcagccaagctgagatatcctcctgtgtgttctcccgttcttggcattcggcaataggtcccatgaagccatgattccatcaggagaggcacatcaagacggttgctagtttctgcattcaattcagggaggacaatttgcagggtgccggtgctaatctgaactctgaaggtgtgttgtgtatcctcttttgcctgcaatgtgcatgttcgatgcctctaaatgagctgttttggaactgtttttcttctgttcctcctctcctgttgtttctcctcccttttgcatttgcttttcagctttcctactagtgaagatgctgaaataaagttgctgtgtgtgtaccggtgtgcaagtgtagtacacagctcaccaacctgttctcatgtgattcttgattcctcatgagtcatccatctgtcatgcatgaagtagatagattacagttcaaaagaagtcaacgttgaattgtagcccttgaattcgacacagtttcttgacgacgaacacatgcatatatacatggcgtgcagggaggagacgtgctggttgcaacctgcaagaggccaagaagcggccgaggcaggcagcaatgagcgggaggtcgaggccgtggccaggggacccgtcgccggcgcctccgcagccgccggtcgtcgccgcagcggcggacgcgggcggcgaggcgtcgacgtcgctcagggacttcggcacgtcgatggacgccatctcgttcgggttcgcggccaccgccatcctcgtctccatgttcctcctcatggccatcttcgagcacctcatcaagccccacgtcttcccgcccctcgccagcgcggcgctccgccccgcgcgccgccgccacggcgtctctcccgccggcaagctccggagccctcccatggtacgtagtacgtcgccaaccacttacacagagcgaaatgatccaatgttgaggtgtttgctgctctgaaattgttgcaggtggagacggtgctgcaggcggcggacctgtcggtgttgatgccggggcaacggtacccgacgtacctggcgcagccggcgccgcttccgccggcgccgtgcccgagggaaggggtgcactggccgccgcacgaccacgacgtccaccactcctacatgccgccatgatcgagatctcgcgtacaatgttgcagtggaacaacatgttagagacacacgctgtcaaaccaaccaaccgaccgatcgatcgatggatcgaatcctgttgctgattgaattgctgtatagcggagacgctgtaaataataaacgcaggggagagtg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0878000, RefSeq:Os01g0878000