Os01g0878300

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Revision as of 05:13, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0878300| Description = Protein kinase-like domain containing protein| Version = NM_001051514.1 GI:115441398 GeneID:4325091| Length = 5860 b...")
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Gene Name

Os01g0878300

Description

Protein kinase-like domain containing protein

Version

NM_001051514.1 GI:115441398 GeneID:4325091

Length

5860 bp

Definition

Oryza sativa Japonica Group Os01g0878300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:39867959..39873818

Sequence Coding Region

39869696..39872237,39873151..39873503

Expression

GEO Profiles:Os01g0878300

Genome Context

<gbrowseImage1> name=NC_008394:39867959..39873818 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:39867959..39873818 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttgcctcagcaacttcagatatatttgtgcttcatccttctgtctctgaagttcggaatatctgcatctctacctcttgaaacagatgctctcttggacataaagagtcatctggaggatccacaaaattacctaggcaattgggatgagtctcattcaccatgccaattttatggcgttacatgtgaccaaacttctggtggtgtcattggaatatcactctccaacgcctcactatcaggaactatatcgtcgtcgttttctcttctttcccaactacgtacgctggagcttggtgcaaactccatctcaggcactattcctgctgcactagctaactgcacaaatctgcaggttcttaacctgtcaacaaacagtttgacagggcaattacctgatctttcaacatttatcaatctacaagttcttgacctgtcaacaaacaatttttctggaccattcccagcatgggttggcaaattatcaggcctaactgaactaggtctaggagagaacaacttcaatgaaggtgatgttcctgaaagtattggaaagctgaagaacctgacatggctattcttggggcaatgcaaccttagaggagaattaccagtttcaatatttgatctggtctcacttgggaccctagacttctcacgcaatcagattattggtgtgtttccaatagcaatatccaacctgcgtaacctatggaagatcgagctctatcaaaacaatctgactggtgaaattcctcctgaacttgcacatttgacattgttatctgaatttgatgtgtcccagaatcagctaagtggtattctgcccaaagagatagcaaacctgaagaagctgaagatctttcatatttaccgaaacaacttctctggtgtgcttcctgaaggattaggggacttggagtttcttgagtcattttcaacctatgaaaatcaattctcaggaaagttccctgcaaaccttggccgattctcaccactcaatgcaattgacatatctgagaattatttttctggtgaatttccaaggttcctgtgccaaaacaacaaattgcagttcttgttggctttggacaacaacttctcaggtgaattccccagctcctactcttcttgcaaaacacttcagaggtttagaataagtcaaaatcagttcactgggagaattcacagtggcatatggggattgcctaatgctgtgatcatcgatgttgccaacaataaatttgttggcggcatatcctctgatataggcatttcggcttctctgaaccaactgtatgttcataataacgtcttctctggtgaacttccaatggagttggggaagctttccctgcttcagaagcttgttgctttcaacaatagattctctggccaaatccctgcacagattggaagtttgaagcagctgtcattcctgcacctggaacaaaatgctctggaaggatcgataccacctgatattggtatgtgcaacagcctagttgatctgaaccttgcagacaattctttgactggcaccattccagacacactagcatctctattcactctgaattcactcaacctatctcacaacatgatctctggtgaaatccctgaaggattgcaatatctgaagcttagttatgttgatttctcccacaacaatttatctggaccagtccctccagctctcctgatgatagctggagatgatgcattctctgaaaacgacggcctttgtattgctggagtttcagaaggttggaggcaaaatgccaccaatttaagatactgcccgtggaacgacaaccatcagaacttctcgcagagaaggctatttgtcgtgctgataatagtgacatctctggtggttctcctatctgggttggcatgcctgagatatgaaaattacaagcttgagcagttccacagcaagggagacatcgagagcggcgacgacagtgactcaaagtgggttcttgagtccttccacccccctgagcttgatcctgaggagatttgcaacttggatgtggacaatctgattggctgtggaggcactggcaaagtttataggcttgaattgagcaaagggaggggtgttgtggccgtgaagcaactatggaagcgtgatgatgcaaaggtcatgagaactgagatcaacacacttgggaaaatacgccaccggaacatcctgaaactccatgcattcttgaccggtggggaatcaaactttctggtgtatgagtatgtggtaaatggcaatctctacgatgcaatccgccgtgagttcaaggctgggcagccggagctggactgggagaagcggtaccggattgcggttggaaccgcaaagggcatcatgtatcttcaccatgattgctccccggccataatccaccgtgacataaaatccaccaatatactgctggatgaggagtatgaagcgaagcttgcggatttcggcatcgccaaattggtggaaggttcaccactcagctgcttcgctggtacccatggctacatggctcctgagcttgcttattctctcaaggtgacagagaagagtgatgtttacagctttggcattgtgctgttagagctgcttactggacgcagcccttcagaccaacagtttgacggtgaactggacattgtctcctgggtttcatcccatttggccaaccagaatcctgcagctgttcttgatccaaaggttagcagccatgcatcagaggacatgacaaaggtcttgaacattgccatcctttgcactgttcaactgccttctgaacggccaaccatgagagaagtcgtgaaaatgctcatcgacatcgactctatctcagcaaacgggaaggcaaagaacaagaatgataagaagtaa</cdnaseq>

Protein Sequence

<aaseq>MLPQQLQIYLCFILLSLKFGISASLPLETDALLDIKSHLEDPQN YLGNWDESHSPCQFYGVTCDQTSGGVIGISLSNASLSGTISSSFSLLSQLRTLELGAN SISGTIPAALANCTNLQVLNLSTNSLTGQLPDLSTFINLQVLDLSTNNFSGPFPAWVG KLSGLTELGLGENNFNEGDVPESIGKLKNLTWLFLGQCNLRGELPVSIFDLVSLGTLD FSRNQIIGVFPIAISNLRNLWKIELYQNNLTGEIPPELAHLTLLSEFDVSQNQLSGIL PKEIANLKKLKIFHIYRNNFSGVLPEGLGDLEFLESFSTYENQFSGKFPANLGRFSPL NAIDISENYFSGEFPRFLCQNNKLQFLLALDNNFSGEFPSSYSSCKTLQRFRISQNQF TGRIHSGIWGLPNAVIIDVANNKFVGGISSDIGISASLNQLYVHNNVFSGELPMELGK LSLLQKLVAFNNRFSGQIPAQIGSLKQLSFLHLEQNALEGSIPPDIGMCNSLVDLNLA DNSLTGTIPDTLASLFTLNSLNLSHNMISGEIPEGLQYLKLSYVDFSHNNLSGPVPPA LLMIAGDDAFSENDGLCIAGVSEGWRQNATNLRYCPWNDNHQNFSQRRLFVVLIIVTS LVVLLSGLACLRYENYKLEQFHSKGDIESGDDSDSKWVLESFHPPELDPEEICNLDVD NLIGCGGTGKVYRLELSKGRGVVAVKQLWKRDDAKVMRTEINTLGKIRHRNILKLHAF LTGGESNFLVYEYVVNGNLYDAIRREFKAGQPELDWEKRYRIAVGTAKGIMYLHHDCS PAIIHRDIKSTNILLDEEYEAKLADFGIAKLVEGSPLSCFAGTHGYMAPELAYSLKVT EKSDVYSFGIVLLELLTGRSPSDQQFDGELDIVSWVSSHLANQNPAAVLDPKVSSHAS EDMTKVLNIAILCTVQLPSERPTMREVVKMLIDIDSISANGKAKNKNDKK</aaseq>

Gene Sequence

<dnaseqindica>1738..4279#5193..5545#ctcctgtgtgctagcggaggcggagcactacacggttaattctgcggttgctgctgctacctgcgaccttctagcaggtgcgtttcctcctcgctttgcctatatatatatccacttacatttctcggcttgatccatggattagtctgtcgatctcttccatgccatcgatctcgctggttaagattgcgctctagtgcttagcttgttgcagagccttgactttctttctctgctaagaactgaataacttgactctgagtaagagcttgcatatatagctcttagtatattcttcagattttgtcattgatgttatgcgacttgtgcatttctttgactgatatcatgtagtaatcactaaacttcatgcctgactctaggttgtgagttgtgagacagcgagagttagtcggtgtagtttcatcaggaagggccgcttagacagtgagaactgagaactgagaaatacagcagtaggaaataaatacccgttctactctggtgtcagtcctagatataatttaccactgtgtttcatgcatgatccgattcttagttttctcgacaagaggtggtaaccacatgtaaatattgttgtttagcatagctcttgtgatcaaagaggatggaaaattcctggtagggtcagtaagggaaggaatcagcattgcgttcccattgttcatatatctgacaaatgataatgatgtcttggtgtccattgctactggacaaaatagtacaggttagctgagtcagaagggttcatgcagaaagtgtagaacttattgcagataaaaccctttgcaaatcatgtacagcagtagagcttcatactgtcaccggcttactgcgcagtccccaacgtttgatcatgtggtccataaggatcaatcgttcaaactgcatcagaattcagaacctaagcatgaagaaatactacctcgatctaccactagacagccatatatgacattgacaacggcaataaggaccgttgctttagaccaaaatagaatcagcagtgcatccacttcctggatgggttaaatgctgatacgaagtatgaacagacataacctaatcttaattaactgacaggctgaaaaaggtatcgggtatattcaatgaatctggtaaaatatctggctgatttattgcgttagtatcaagtgattagtactatgagatttggtattgctactcaagattctttgtttcttttttcatgaaagaggtcttgagaaaattcgtagtgtaagcatttgttttgctgaagagaacaaccaaaaccataagcccaggcaaaagtgtgttcatttaactcagtaaactagtctttcctgatccgaagtttggagcaaactttaatttttctaatacacttttgttttaaagagagaacaaaaaagctgatatttgctaaaggaacaagtatctaattactcttttattacttggtccccatgattattcagtaactggctttcagtataatgatacaacttttggtcttttcacacttcactttccttcaatcctattcaactatcactgcactgggagctaactacacatagacatagctttcattctttttctgaagtttaaataatgtttacttttctgaaaatttcaacgtattgatatcatcatcaaatccagtatgacatgccccaaactaacgtaagattcatacttttcaggtacacagtgctaacaagtaacaacacaatgttgcctcagcaacttcagatatatttgtgcttcatccttctgtctctgaagttcggaatatctgcatctctacctcttgaaacagatgctctcttggacataaagagtcatctggaggatccacaaaattacctaggcaattgggatgagtctcattcaccatgccaattttatggcgttacatgtgaccaaacttctggtggtgtcattggaatatcactctccaacgcctcactatcaggaactatatcgtcgtcgttttctcttctttcccaactacgtacgctggagcttggtgcaaactccatctcaggcactattcctgctgcactagctaactgcacaaatctgcaggttcttaacctgtcaacaaacagtttgacagggcaattacctgatctttcaacatttatcaatctacaagttcttgacctgtcaacaaacaatttttctggaccattcccagcatgggttggcaaattatcaggcctaactgaactaggtctaggagagaacaacttcaatgaaggtgatgttcctgaaagtattggaaagctgaagaacctgacatggctattcttggggcaatgcaaccttagaggagaattaccagtttcaatatttgatctggtctcacttgggaccctagacttctcacgcaatcagattattggtgtgtttccaatagcaatatccaacctgcgtaacctatggaagatcgagctctatcaaaacaatctgactggtgaaattcctcctgaacttgcacatttgacattgttatctgaatttgatgtgtcccagaatcagctaagtggtattctgcccaaagagatagcaaacctgaagaagctgaagatctttcatatttaccgaaacaacttctctggtgtgcttcctgaaggattaggggacttggagtttcttgagtcattttcaacctatgaaaatcaattctcaggaaagttccctgcaaaccttggccgattctcaccactcaatgcaattgacatatctgagaattatttttctggtgaatttccaaggttcctgtgccaaaacaacaaattgcagttcttgttggctttggacaacaacttctcaggtgaattccccagctcctactcttcttgcaaaacacttcagaggtttagaataagtcaaaatcagttcactgggagaattcacagtggcatatggggattgcctaatgctgtgatcatcgatgttgccaacaataaatttgttggcggcatatcctctgatataggcatttcggcttctctgaaccaactgtatgttcataataacgtcttctctggtgaacttccaatggagttggggaagctttccctgcttcagaagcttgttgctttcaacaatagattctctggccaaatccctgcacagattggaagtttgaagcagctgtcattcctgcacctggaacaaaatgctctggaaggatcgataccacctgatattggtatgtgcaacagcctagttgatctgaaccttgcagacaattctttgactggcaccattccagacacactagcatctctattcactctgaattcactcaacctatctcacaacatgatctctggtgaaatccctgaaggattgcaatatctgaagcttagttatgttgatttctcccacaacaatttatctggaccagtccctccagctctcctgatgatagctggagatgatgcattctctgaaaacgacggcctttgtattgctggagtttcagaaggttggaggcaaaatgccaccaatttaagatactgcccgtggaacgacaaccatcagaacttctcgcagagaaggctatttgtcgtgctgataatagtgacatctctggtggttctcctatctgggttggcatgcctgagatatgaaaattacaagcttgagcagttccacagcaagggagacatcgagagcggcgacgacagtgactcaaagtgggttcttgagtccttccacccccctgagcttgatcctgaggagatttgcaacttggatgtggacaatctgattggctgtggaggcactggcaaagtttataggcttgaattgagcaaagggaggggtgttgtggccgtgaagcaactatggaagcgtgatgatgcaaaggtcatgagaactgagatcaacacacttgggaaaatacgccaccggaacatcctgaaactccatgcattcttgaccggtggggaatcaaactttctggtgtatgagtatgtggtaaatggcaatctctacgatgcaatccgccgtgagttcaaggctgggcagccggagctggactgggagaagcggtaccggattgcggttggaaccgcaaagggcatcatgtatcttcaccatgattgctccccggccataatccaccgtgacataaaatccaccaatatactgctggatgaggagtatgaagcgaagcttgcggatttcggcatcgccaaattggtggaaggttcaccactcagctgcttcgctggtacccatggctacatggctcctggtaagatatgaacaattctgctcttgtatgttaaatgtttatggtagtagttagtattgcacatgaattccttaggaaaaaaaacaaaatgcgtaatacctcttcttccagcccttacccattcctctcaaccatctcgcggatgaattcgccatgccgctgctctcttgctcggccgccgccgccgcggcgccaccttgcgagcaggtcgaccgccgtcggcggctgtgacgcgcatcggccactccacccccttcttccccgacaggcgcccccccccttctaccaccgccgcggtgctcgagctcccacctccctcccattccctccccgcctgccgccagcaacctccccttcaaccaccgcccgccgcggccgtcgtagtcgaccgctactggccgcgccatccgccgccgccatcctccagtgcctccgatgcggacgaatttcttggcgattagccgattacatgcggtgaatgagtgggagtcccaccgggaatggtcaggctcatatgaagatggtatctttagaaataactgaaaataatttattaataaacgtttaactatatttttcatggttttaaaccgatgctgaaaaatatactactgcaacgataaacaaaaacactgaaatcaaacttaaaattaagtttcagaattcaatttttggttgggctaataaactaacaagcaacgagggtagaattgctactaggtattctggaaaaaaagagagagaaagaattgctactagtcatggacaatgttattaaaaaaaatattcatacatttttatatgaaagcaaatggcatccatcataattcttcaaaaggtgtaattctgacatgcatattatgcgtagttctgtagatttgacaatctaacatcagctcgtctcaaaatgcagagcttgcttattctctcaaggtgacagagaagagtgatgtttacagctttggcattgtgctgttagagctgcttactggacgcagcccttcagaccaacagtttgacggtgaactggacattgtctcctgggtttcatcccatttggccaaccagaatcctgcagctgttcttgatccaaaggttagcagccatgcatcagaggacatgacaaaggtcttgaacattgccatcctttgcactgttcaactgccttctgaacggccaaccatgagagaagtcgtgaaaatgctcatcgacatcgactctatctcagcaaacgggaaggcaaagaacaagaatgataagaagtaagaacagatgccccgtttctttgtaagaaactgctgccagaaagatcaaaaggcacccagtagcaacagtctgggtgctgccgtgctgccaattaggaccttaattagaatgcctgactagtgaatagtaactagtaggctggtaataaactgaggttttagcagcctctgaaaagcttgcacatatgtacaagctaccctgtacaaatttcagtcatgtactctgaagtttctgtaaaaatgatatgcgaagaattatgatgtaccagtaccacactgcaatgccagtagaatatgaccataccgttaaaaatgg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0878300, RefSeq:Os01g0878300