Os01g0878900

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Revision as of 05:14, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0878900| Description = Similar to 4,5-DOPA dioxygenase extradiol-like protein| Version = NM_001051518.1 GI:115441406 GeneID:4324833| Length...")
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Gene Name

Os01g0878900

Description

Similar to 4,5-DOPA dioxygenase extradiol-like protein

Version

NM_001051518.1 GI:115441406 GeneID:4324833

Length

1356 bp

Definition

Oryza sativa Japonica Group Os01g0878900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:39900632..39901987

Sequence Coding Region

39900841..39901443,39901588..39901827

Expression

GEO Profiles:Os01g0878900

Genome Context

<gbrowseImage1> name=NC_008394:39900632..39901987 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:39900632..39901987 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacaccttcttcctatcgcacggcacgcccacgctctccatcgacgacacgatgccggcgcagcacttcttcaggtcgtggctaccggcggcggtggcgggcgcgcagcctccgcgtgccatcctcatcgtgtcgggccactgggagacggccacgccgaccgtcaacgtcgtccgcggcaacaatgacaccatccacgacttcgagggctatggcttccccaagtccatgttccagctggaatacccggcgccgggcgcccctgatgtggcgaagaaggccaaagagctcttggagcaagccggatttgggccggtgaaggaggaccacggccgcgggcttgaccacggcgcgtgggtgccactgatgttcatgtacccggaggcgaacgtgccggtgtgccagctctccctgcagaccggccgcgacggcgcgtaccactacgatctcggcagagcgctggcgcctctccgggacgacggcgtcctcatcctcggctccggcaacgccacgcacaaccttagctgcatggcgcccgtcgccgagggcacgccggtgccccagtgggcggcggagttcgacgggtggctgcaggaggcgctcctcgcgggcgggaggcacgacgacgtgaagcagtacgaggagaaggcgccgaacggtaagatggcgcacccgtcgccggaccacttcctcccgctgcacgtcgcgctcggcgccgccggggaggatgccaaggcggagctgatccaccatagctggtacaacgcgacgctctcccacgcgtcgtaccgcttcaccaccaccaccaagaacaaaccgattgccgcatgcaaagagtga</cdnaseq>

Protein Sequence

<aaseq>MDTFFLSHGTPTLSIDDTMPAQHFFRSWLPAAVAGAQPPRAILI VSGHWETATPTVNVVRGNNDTIHDFEGYGFPKSMFQLEYPAPGAPDVAKKAKELLEQA GFGPVKEDHGRGLDHGAWVPLMFMYPEANVPVCQLSLQTGRDGAYHYDLGRALAPLRD DGVLILGSGNATHNLSCMAPVAEGTPVPQWAAEFDGWLQEALLAGGRHDDVKQYEEKA PNGKMAHPSPDHFLPLHVALGAAGEDAKAELIHHSWYNATLSHASYRFTTTTKNKPIA ACKE</aaseq>

Gene Sequence

<dnaseqindica>545..1147#161..400#aagcccaacccggccggcagcacacgcgacgcgcgcgccgacgcgaccacaccgacaccgacgcggccggcgagataagataagcagctagcagggagtggcctccgaaaccgagaggacgaggagtacacaacgtacgggactacggggcgcgggggccatggacaccttcttcctatcgcacggcacgcccacgctctccatcgacgacacgatgccggcgcagcacttcttcaggtcgtggctaccggcggcggtggcgggcgcgcagcctccgcgtgccatcctcatcgtgtcgggccactgggagacggccacgccgaccgtcaacgtcgtccgcggcaacaatgacaccatccacgacttcgagggctatggcttccccaagtccatgttccaggtccaactgttcgcgtttcgtccttccctaccatgcatgcatcatgtttgttgccttgtgatctgatcacgaggcaaagcttgttccctcctttcaaaaatttaaaaaaaaaactgaataatgcatgcatggcatcccatgcagctggaatacccggcgccgggcgcccctgatgtggcgaagaaggccaaagagctcttggagcaagccggatttgggccggtgaaggaggaccacggccgcgggcttgaccacggcgcgtgggtgccactgatgttcatgtacccggaggcgaacgtgccggtgtgccagctctccctgcagaccggccgcgacggcgcgtaccactacgatctcggcagagcgctggcgcctctccgggacgacggcgtcctcatcctcggctccggcaacgccacgcacaaccttagctgcatggcgcccgtcgccgagggcacgccggtgccccagtgggcggcggagttcgacgggtggctgcaggaggcgctcctcgcgggcgggaggcacgacgacgtgaagcagtacgaggagaaggcgccgaacggtaagatggcgcacccgtcgccggaccacttcctcccgctgcacgtcgcgctcggcgccgccggggaggatgccaaggcggagctgatccaccatagctggtacaacgcgacgctctcccacgcgtcgtaccgcttcaccaccaccaccaagaacaaaccgattgccgcatgcaaagagtgaaacatgtcttgcttatatcatcgccattttactcttaacaattaataatctccgtgggatctacgttaatatactcctattaacgtagacgtacgttcgtgcctgtatttcctaacggccgtgtcttgtggttttcagttgcaataaacttgcatgcatggtggtttgggttgtggcccagcctctcatggcgttgatatcactatgat</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0878900, RefSeq:Os01g0878900