Os01g0879500

From RiceWiki
Revision as of 05:14, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0879500| Description = Conserved hypothetical protein| Version = NM_001051523.2 GI:297598047 GeneID:4324838| Length = 2464 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0879500

Description

Conserved hypothetical protein

Version

NM_001051523.2 GI:297598047 GeneID:4324838

Length

2464 bp

Definition

Oryza sativa Japonica Group Os01g0879500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:39913166..39915629

Sequence Coding Region

39913402..39914076,39914196..39914312

Expression

GEO Profiles:Os01g0879500

Genome Context

<gbrowseImage1> name=NC_008394:39913166..39915629 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:39913166..39915629 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtacttggttgattttgagcttcactcattatggttgttttgttcatactatgtaggagatgacgatgaagatttggaaatgattgttgtgagagatgtcaatgaaggggaggaggtttttaacacatacggtaccatgggaaatgctgctttgcttcatcgatatggcttcacagagatggacaactcatatgacatcgtcaacatcgacttagctctggttactaagtggtgctcttctaagtactcccgtcgatatgcaagagcaagggtatcactctggcataatctgggctattcaggttgcaccagccaagatgctgactactttgagatttcatatgatggagagccccagcttgaacttttgatcctgctttatatcatctccttgaagtctgatgcttatgacaagctggccagcgtggctcatgatctgattggtgatgatgaggtcgacagcattagtagtgtgcttaaggttgtcagagtaacaagctccaatcaacatccagatattagcgggcttgaaaaattgcctgatgttaagaagctattgcttaatgagagcgtttgttctgcacttgtatcccttgttgacatgagggagagcctctatggttcaaacactttggaagatgacaggcaaaaactgcaagcatgctcttctgtcaacgaaaggaatctctatcattctttggtgctgcgggtgagcgagagaacaatacttcacaaattgaagaaacatgcatctagttggtcaaagaccaagaagaggaaacagctctag</cdnaseq>

Protein Sequence

<aaseq>MYLVDFELHSLWLFCSYYVGDDDEDLEMIVVRDVNEGEEVFNTY GTMGNAALLHRYGFTEMDNSYDIVNIDLALVTKWCSSKYSRRYARARVSLWHNLGYSG CTSQDADYFEISYDGEPQLELLILLYIISLKSDAYDKLASVAHDLIGDDEVDSISSVL KVVRVTSSNQHPDISGLEKLPDVKKLLLNESVCSALVSLVDMRESLYGSNTLEDDRQK LQACSSVNERNLYHSLVLRVSERTILHKLKKHASSWSKTKKRKQL</aaseq>

Gene Sequence

<dnaseqindica>1554..2228#1318..1434#gccgccagccatggaagcttccgcctccacctccaccgcacggtaagatcctctgctttgctcttctctgtatgcgctcccccgccgcgctacgatccgtgacccttccgcgaccgcgcagccgcctacgggccttcaggcggtggatgcgggaccacggcgtcgtctgcagcaacgcgctccgcctcgacgccgccgaggacggtggcggcggcgtctacgtgcgcgccctcgccgcgctccgggagggggacctcgtggccaccatcccgcggggcgcgtgcctgaccccgcgcacctccggcgccgccgaggccatcgaggccgcggagctcggcgggcccctcgcgctcgccgtcgccgtcatgtatgagcgcgcgcgcggcgccgagtcgccgtgggacgcctacctccgcctgatccccgagcgggagcccgtgccgctcgtctggcccgccgatgaggccgagcgcctcctggccggcaccgagctcgataaggtgagcccttctattgtagtaacaagttgcaatgcttccacgatttgtatctgccttgatgcttcgatggtaggcagtgaaattgatctatcttgcaatgtttggctccctggagttacaactatggccatttttccttttcaaatcagcataatgcgagctaattatgcatatgatgtactttcctgttgcacacatttcatgtttcatattgcgttattggctgatcactaagatggctctaaaaacggcaaaatttctaggcagatagtgaagcaagacaggcagttcatatgtgaggactggaaagagtgtattgagccactcattttgtcaggagaacttgaggttgacccagatgattttagcctggagaattatttctctgctaagagtctactttcgtcgaggtccttccgaatagatagctatcatgggtctggaatggttcccctggctgacctgtaagttacaatctactcatgtaattagattatttctcgtttacctggttatttggaaacaatgcatcaggtgtgcacatacttaggtgatgatgtatttgtgctggtcttaagtctgagcgttaatatggaaatgccctccatccaatttgtttcagttttaaccacaagactggtggggaacatgtccacttcacttcagtgttagaagcctcggactcagatagtgaagatggtgaagatccaaacaatgcttctgctgatgaacagtcaactatagaaaattctgccgacatcccttcaggttacatccatgaccatctgcatgtaacatcattagaccttatttagacatgtacttggttgattttgagcttcactcattatggttgttttgttcatactatgtaggagatgacgatgaagatttggaaatgattgttgtgagagatgtcaatgaaggggaggaggtaattgtgtgcttaccatcttttatttgggtccaaagtattgcttaatgtatcactgttagatatcagttaggttcctgttttgaggcaactttatgtttcctcttgttccactgtaggtttttaacacatacggtaccatgggaaatgctgctttgcttcatcgatatggcttcacagagatggacaactcatatgacatcgtcaacatcgacttagctctggttactaagtggtgctcttctaagtactcccgtcgatatgcaagagcaagggtatcactctggcataatctgggctattcaggttgcaccagccaagatgctgactactttgagatttcatatgatggagagccccagcttgaacttttgatcctgctttatatcatctccttgaagtctgatgcttatgacaagctggccagcgtggctcatgatctgattggtgatgatgaggtcgacagcattagtagtgtgcttaaggttgtcagagtaacaagctccaatcaacatccagatattagcgggcttgaaaaattgcctgatgttaagaagctattgcttaatgagagcgtttgttctgcacttgtatcccttgttgacatgagggagagcctctatggttcaaacactttggaagatgacaggcaaaaactgcaagcatgctcttctgtcaacgaaaggaatctctatcattctttggtgctgcgggtgagcgagagaacaatacttcacaaattgaagaaacatgcatctagttggtcaaagaccaagaagaggaaacagctctagctattttggggaaatgatgttatattatggcactggtactcaacatatactgcttaaaattttgctttagcaattaacaggcagtttttgtttttcccaatctggtagattcttaagcggtagatcaccaacggaatttatccgagtcatttgttgttcttttgttaatgctgtgatctgttgttccatgtcaattctttctgaggttgacaatattttgacatgacttaagtact</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0879500, RefSeq:Os01g0879500