Os01g0880200

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Revision as of 05:14, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0880200| Description = Glycosyl transferase, family 8 protein| Version = NM_001051526.1 GI:115441422 GeneID:4324841| Length = 5591 bp| Def...")
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Gene Name

Os01g0880200

Description

Glycosyl transferase, family 8 protein

Version

NM_001051526.1 GI:115441422 GeneID:4324841

Length

5591 bp

Definition

Oryza sativa Japonica Group Os01g0880200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:39952869..39958459

Sequence Coding Region

39953699..39953748,39955672..39955872,39956044..39956678,39956986..39958007

Expression

GEO Profiles:Os01g0880200

Genome Context

<gbrowseImage1> name=NC_008394:39952869..39958459 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:39952869..39958459 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggttctttggagacgacgaacacgcggtaccggccggccggagcagcggatgacacagctaagagaaggacccagaaaagcaaaagtttcaaagaggtcgaaaaatttgatgtctttgtcctagagaaaagctctggttgcaagttccggtccttacaacttctgctcttcgcgatcatgtctgctgcatttctgacactattgtacactccatctgtgtacgaccatcaaatgcagtctagttctcggtttgtcagtgggtggatatgggacaagaccattcctgatccacgatatgtatcttcgcttggtgttcagtgggaggatgtatataaaaccgtcgaaaatctgaatgatggtgaacggaagctcaaagttggactattaaattttaacagcactgaaattggctcatggacacaattgctcccggatagtgatttttcgatcattaggctagagcatgccaaggaaagcatcacctggcagactctttaccctgaatggattgatgaggaggaagaaacagagataccatcgtgtccatcgcttccagatcctatttttccaagagggacacactttgatgttgttgctgtgaaacttccctgtacccgagctggtggatggtcaagagacgttgcacgtctgcatttgcaactatctgctgcaaaagtggcagtgactgcttcaagaggcaatcgtggtatccatgtgctgtttgtgacggattgcttccctattccaaatctcttctcttgcaagaaccttgtgaaacatgaaggcaatgcttggatgtacaagcctgacttgaaggcactaagggagaagctcagacttccagttggatcctgtgaacttgctgttccactcaaagcaaaagcacgactttactcggtagacagacggagggaagcatatgctactattctgcattcagcaagtgaatatgtctgtggtgcaatcacagctgcccaaagcattcgccaagccggatcaactagggattttgttattcttgttgacgagaccataagtaaccaccaccggaagggcttggaagctgctgggtggaaggttagaataatccaaaggatccggaatccgaaagctgagcgtgatgcatataatgagtggaactacagcaaattccgtctatggcagctcacagattacgacaagattatatttattgatgctgatctcctcattctgagaaatgtcgattttctgttcgcaatgccagaaatcactgcaaccggcaacaatgcgacactgttcaactctggagtaatggttattgagccttcaaactgcacattccagttgttgatggaccacatcaatgagataacatcctacaatggtggtgaccaaggatacctgaatgagatattcacatggtggcatcgaattccgaagcacatgaacttcttaaaacatttctgggagggggatgaagaggaagtgaaagtgaagaagactcggttgtttggtgctgacccaccaatcctctatgtccttcactatttgggtctcaaaccatggctgtgcttccgggattacgactgtaactggaataacccgatactgcgggagtttgccagtgatgttgcacatgcccgttggtggaaggtacatgacaagatgccaaagaaacttcagcactattgtcttttgagatcaaggcaaaaggctgggttggagtgggatcggaggcaggctgagaaagcaaacttcaccgatggacattggcggaggaacataactgatcctaggctgaaaacttgctttgagaagttctgcttctgggagagcatgttatggcactggggtgaatccaagaactcaacgaaggaaaaccctgtgccggccacacctaccgcgagcctcacaagttcatga</cdnaseq>

Protein Sequence

<aaseq>MGSLETTNTRYRPAGAADDTAKRRTQKSKSFKEVEKFDVFVLEK SSGCKFRSLQLLLFAIMSAAFLTLLYTPSVYDHQMQSSSRFVSGWIWDKTIPDPRYVS SLGVQWEDVYKTVENLNDGERKLKVGLLNFNSTEIGSWTQLLPDSDFSIIRLEHAKES ITWQTLYPEWIDEEEETEIPSCPSLPDPIFPRGTHFDVVAVKLPCTRAGGWSRDVARL HLQLSAAKVAVTASRGNRGIHVLFVTDCFPIPNLFSCKNLVKHEGNAWMYKPDLKALR EKLRLPVGSCELAVPLKAKARLYSVDRRREAYATILHSASEYVCGAITAAQSIRQAGS TRDFVILVDETISNHHRKGLEAAGWKVRIIQRIRNPKAERDAYNEWNYSKFRLWQLTD YDKIIFIDADLLILRNVDFLFAMPEITATGNNATLFNSGVMVIEPSNCTFQLLMDHIN EITSYNGGDQGYLNEIFTWWHRIPKHMNFLKHFWEGDEEEVKVKKTRLFGADPPILYV LHYLGLKPWLCFRDYDCNWNNPILREFASDVAHARWWKVHDKMPKKLQHYCLLRSRQK AGLEWDRRQAEKANFTDGHWRRNITDPRLKTCFEKFCFWESMLWHWGESKNSTKENPV PATPTASLTSS</aaseq>

Gene Sequence

<dnaseqindica>831..880#2804..3004#3176..3810#4118..5139#cgcgagctctgcacagcgagagagagagagagagagtagagagagaggagtgagagagccggtggcacccagctaacccactcggccgccaccaactgcggccatttccgacgacgccgacgccggggcgcgcccgtcggtgctcccaagtccgccttctctgcgggtgcgtgtgctgctgcatccagcatcctcctccccttcttcctcaccgtgtggcatctgcgtgcctcctgttcttgtgttgctcctgggctcttcttgatctggtttgcgtttgatgcgttgccggtgggagttgctcgatccgggcttggtgcttctgggttttttttttccgatggcgatgtggcgccaccatttgctcgattcggtgtccgggttctctctttttttgcgcggcagcagctagcagatttatttttctgttgccttgctcctagccagtggcgatgttggattttgcagctcccttctacttcgcatttttatcaattatttactcttttttttggtgtgtgtgtgtagttgttctcctgggctttgctctcactatgatgctgttcttctcgggaaaatttcagttctttgcctgctactctctctctctcttccttcgtcctctgtggccgcattggattgttttcttttgcctcggtgaactccatgctcacacgaatcctcccttgtttcttgctccgatttcagatgagaagctgctccaccgcggcggcgacagtgtggtcggccaccgcctgagaccggagagccatagctgacggctcgggggaagattcaggtgggctcgcagagaacgaaagagagtccccatgggttctttggagacgacgaacacgcggtaccggccggccggagcagcgtaagatctccctaccaccacgctgtcccgatctgaagaaaggctccacctttgcgtgcctctcttccactgttcttctctctctctctctctctctctctctctctctctctctctctctttagctggtttacatgctttgatgtatgtgctcgcttgctaacccggctactgtggtgcgttgctttgccatgtgctatcatgtgttgcatgtcgagttcgattgactcaaaaactaattacttctacttcttggtcgatgcgtggcgcccggcgccggccatatcgtcgtggtattcttgcaggaggtggtagtggtgatggtgtactggtttttagtacgctgtacaagatgccgttgttctccttttggtctccgttcatcatgctctcctccttaacttccctcatattgtaggtggtgtggtgggtggtagttgtgcagcttttatggcatccatccttccatttttttccatcctcccccttgttgatgctgctgctgattacagctaagagagaatcagagaacagcagaaacgtgctatctctgcatgttttactctctcttttctagtgtgctgctgctcctgatgcgagttggtttgatgctgatgtgtggagaaaatggatgtctgtttttgcggattttcctttatctccagacggaaagttggttttacttttgtggccatctgatcccctttttagcggctgcaatttggttaaattggatgtgctgtgatgtggagccaggcgtcggtggtcatgtgttttcactgccaatttgaccccaatgactgcaccttgcatcgccggtgccattaaaattgctacacacattagttccatgtgcagtcctcagtggtcaccagtctttaggcacgttgaagcgtaagctacagttgttttgtgcctgtgtggcccatcagcgccaaatgggcgagcttagcgtgtgtatagaatgctgggttttggctagttggatgcttcgatgcacgctagtctagtgggttcagtagtcaggggccggctccgttgttttgaatcaaacttcttgacaaagctttggtgttcacagctgggattacccatgagtgcagcttttcgtttcatgtttaacgttatttaaatcgctaagcgcacttttaaatttgagaccaataacatggggttaggtactggagtatctttgtgattagtgatgcttttctttcctaaaagatgtggtgtgactaataaaggaagaatggaggaaaatgaattggcaccacttctttttgctaatctttttctttaattctcagtgcggagaaccttgctattttgttctctttagccttttttctttgatagctaatcaactttactatgatcgcttttccatactaccgtatgagagattaagtactcctttgaaaagatgtgctatattttttttatagatttagtgttactagggctgtttgtccatataggccagccagatcaaatacacacaagactagtgcaaacttctaggaaaacaaaacatgatcaccaagaaaaatgttttctaagctatctttttgggattaactaatgggaacaatggggccttacaattgatatggaccttggctagcaatttttattacttccatgtgctttcgataaaacagtacaacaatgtaagctgttttttggggaaaatatatcatacttatttattcagtagttctttcatatacaatttcttcttcagacagaattcccccttgtgtcttcatacctggtgcaaattccaaagttttgtttcatcttgctgactatcctacattcaggggttgctttctgaattgttctttaccaattattatttgatgcccaaataattactgtaagaagtcgctgtctgactgtttcttctataccttctttcagggatgacacagctaagagaaggacccagaaaagcaaaagtttcaaagaggtcgaaaaatttgatgtctttgtcctagagaaaagctctggttgcaagttccggtccttacaacttctgctcttcgcgatcatgtctgctgcatttctgacactattgtacactccatctgtgtacgaccatcaaatgcagtctagttctcggtgagtagacctatcaaaaggaaacttattacaatattctgtcagcagtagaatatccagtggaaactagaacaccaattcctgctcgcatcacagtggttatgttggagttatatataataagaaattgcgcattaccctttttgaccatacctttcatatgctttacaggtttgtcagtgggtggatatgggacaagaccattcctgatccacgatatgtatcttcgcttggtgttcagtgggaggatgtatataaaaccgtcgaaaatctgaatgatggtgaacggaagctcaaagttggactattaaattttaacagcactgaaattggctcatggacacaattgctcccggatagtgatttttcgatcattaggctagagcatgccaaggaaagcatcacctggcagactctttaccctgaatggattgatgaggaggaagaaacagagataccatcgtgtccatcgcttccagatcctatttttccaagagggacacactttgatgttgttgctgtgaaacttccctgtacccgagctggtggatggtcaagagacgttgcacgtctgcatttgcaactatctgctgcaaaagtggcagtgactgcttcaagaggcaatcgtggtatccatgtgctgtttgtgacggattgcttccctattccaaatctcttctcttgcaagaaccttgtgaaacatgaaggcaatgcttggatgtacaagcctgacttgaaggcactaagggagaagctcagacttccagttggatcctgtgaacttgctgttccactcaaagcaaaaggtatgtcttactgccttcatttttaaatggcttcccatttcatgccacttaatccctatgatatataacaagagagccaaatatgaagtagttaaaatatcgatgttgctgtaagtaagcttttagaatctaccattgcatttctttttcgggaatgagcaagagtggttgctttatcgcagatgtatcagtaatgttttggtgattttgtccggaaatgttagaacatacttttgcaccttctagttttattttcctgcgtggcattgaaatttccactagataacatctttcatctcctttacagcacgactttactcggtagacagacggagggaagcatatgctactattctgcattcagcaagtgaatatgtctgtggtgcaatcacagctgcccaaagcattcgccaagccggatcaactagggattttgttattcttgttgacgagaccataagtaaccaccaccggaagggcttggaagctgctgggtggaaggttagaataatccaaaggatccggaatccgaaagctgagcgtgatgcatataatgagtggaactacagcaaattccgtctatggcagctcacagattacgacaagattatatttattgatgctgatctcctcattctgagaaatgtcgattttctgttcgcaatgccagaaatcactgcaaccggcaacaatgcgacactgttcaactctggagtaatggttattgagccttcaaactgcacattccagttgttgatggaccacatcaatgagataacatcctacaatggtggtgaccaaggatacctgaatgagatattcacatggtggcatcgaattccgaagcacatgaacttcttaaaacatttctgggagggggatgaagaggaagtgaaagtgaagaagactcggttgtttggtgctgacccaccaatcctctatgtccttcactatttgggtctcaaaccatggctgtgcttccgggattacgactgtaactggaataacccgatactgcgggagtttgccagtgatgttgcacatgcccgttggtggaaggtacatgacaagatgccaaagaaacttcagcactattgtcttttgagatcaaggcaaaaggctgggttggagtgggatcggaggcaggctgagaaagcaaacttcaccgatggacattggcggaggaacataactgatcctaggctgaaaacttgctttgagaagttctgcttctgggagagcatgttatggcactggggtgaatccaagaactcaacgaaggaaaaccctgtgccggccacacctaccgcgagcctcacaagttcatgagatgtgtagatagccctataccagatacaaacttctaagctccatacatacatagcaacagcttgtaaaggtagctatgcttaggtttctcgacaaaactataccttgtgtttgctatcatggcttcggctccactctggctgctttgatagctcacaatttttttggttttttggccaataattcatcagtataggtaaattttctgttcatgaattgtttggtcagtctggggttggttgttgctcggctgcaatagcctagttcgatgtatggtggttgaactgtttcggtgataaaatctggagtgacgcaacatgagattgctgaccagcaaacactgcctcattttgacatgaaatacagtattgttttaaaattgagttggattaatacggtcacggctgacatccacagatggttggacgttggagcagctggggccattttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0880200, RefSeq:Os01g0880200