Os01g0882300

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Revision as of 05:14, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0882300| Description = Protein of unknown function DUF803 family protein| Version = NM_001051542.1 GI:115441454 GeneID:4324996| Length = 56...")
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Gene Name

Os01g0882300

Description

Protein of unknown function DUF803 family protein

Version

NM_001051542.1 GI:115441454 GeneID:4324996

Length

5644 bp

Definition

Oryza sativa Japonica Group Os01g0882300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:40055846..40061489

Sequence Coding Region

40056200..40056383,40057055..40057111,40057197..40057287,40057387..40057547,40057633..40057760
,40057879..40058016,40058305..40058397,40060807..40060912,40060981..40061105

Expression

GEO Profiles:Os01g0882300

Genome Context

<gbrowseImage1> name=NC_008394:40055846..40061489 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:40055846..40061489 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgactgaggcgtccacttcggcggccgccggtgccgggggcgggagctgggtggaggggatgtcggccgacaacatcaaggggctggtgctagcgctctcctccagcttcttcatcggcgccagcttcatcgtcaagaagaaggggctcaagaaggccggcgcctccggcgtccgcgcaggcgttggaggttactcctacttgtatgaaccattgtggtgggctggaatgattacaatgattgttggagaagtagctaactttgcagcatatgcctttgctcctgctatcttagtaaccccacttggtgcgctaagcatcatcatcagtgctgttcttgcagatattatgttgaaggagaagcttcacatatttggtatacttggttgtgtcctctgtgttgtgggttcaacaaccattgtgcttcatgcgccgcaggagcgtgaaattgattctgtagctgaagtgtgggctcttgctactgaaccagcctttctattttatgcagtcactgtgcttgctgcgacttttgtgctcatattccgctttatcccccaatatggtcagacacacattatggtgtatattggtgtttgttctcttgtagggtctctctcggtcatgagtgtgaaagcacttggaatagccttgaaactgactttttcaggaatgaaccagctaatctatccacagacatggatgttcaccattgttgttgttgcatgtatactaactcagatgaactatctaaacaaggctcttgacacattcaatactgcagttgtttcgcctatatattatacaatgtttacatcactaaccattttggctagtgtgataatgttcaaggactgggatcgtcaaaatccaactcaaattgtgacagagatgtgtggttttgttaccatcctttctgggacgtttcttcttcacaagacgaaagatatggtcgatggactcccaccaactctacctatccgaataccgaaacatgatgaagatggctatgcggctgaaggcatccccctcaggtctgctgctgaaggcctccctcttaggtcaccaagagcagcagaatga</cdnaseq>

Protein Sequence

<aaseq>MATEASTSAAAGAGGGSWVEGMSADNIKGLVLALSSSFFIGASF IVKKKGLKKAGASGVRAGVGGYSYLYEPLWWAGMITMIVGEVANFAAYAFAPAILVTP LGALSIIISAVLADIMLKEKLHIFGILGCVLCVVGSTTIVLHAPQEREIDSVAEVWAL ATEPAFLFYAVTVLAATFVLIFRFIPQYGQTHIMVYIGVCSLVGSLSVMSVKALGIAL KLTFSGMNQLIYPQTWMFTIVVVACILTQMNYLNKALDTFNTAVVSPIYYTMFTSLTI LASVIMFKDWDRQNPTQIVTEMCGFVTILSGTFLLHKTKDMVDGLPPTLPIRIPKHDE DGYAAEGIPLRSAAEGLPLRSPRAAE</aaseq>

Gene Sequence

<dnaseqindica>355..538#1210..1266#1352..1442#1542..1702#1788..1915#2034..2171#2460..2552#4962..5067#5136..5260#agccaaagtagtagtagcggccaagtccacaccgagacatcacacaaacatccccgtcgcgtggactcgcgaaccccaattcccctctcccctcccacccaacctcgccgtcgccgtcgccgtcgccgccgtctccgccgctcgatttctccccgccccccacgcagtccagagcggatcgaatgcgtggccctcgccgcccgtagcctaccccggcccggaacggcgagcgcagccagtccctcctcgccgcatccggatctccgcatgcgccacgtccgcggcgggatctagcggcgtcgcaccccccggaggttgtagaagggtttccgggatttgggggcgccggggggtatggcgactgaggcgtccacttcggcggccgccggtgccgggggcgggagctgggtggaggggatgtcggccgacaacatcaaggggctggtgctagcgctctcctccagcttcttcatcggcgccagcttcatcgtcaagaagaaggggctcaagaaggccggcgcctccggcgtccgcgcaggtgacctaatctcgtcctaacatcaccattttactcggtgccggacctgtgtgtagtttatgctcctttttttggttttctgatccgaaccacaatgtttggtcttcttttatacttctatacatgcgatctctccggggaagtactgcggatctgtattagggttagggagagtggtgagcctatgggtacaccatgatgaggcattttaggcatagcgagagtggattggatactaaattgattggcaacggcatggaattagatggtgaggagttggcatatgttggcgcaataatgatgcattactatttcttactcttgagtttatgcttcatgttctataattgaattgtagtttataataattgtccgaacatttgagcgtgtaaaatttttagatgacctagtccagctaagagtgggaatggcctaaattttcctgataagattgggaagaaaccataactctattgtttgaactttttaaggggttattgttggcttggctgcaagatgcataccttgttagtttggatgtacaatatagttataaacatatttgccttgttagtttgggtgtacaatatagttataacatatgtgccttgttagtttggatgggcaatagttctttttcgctgactatgtttacattggttgggttgcaggcgttggaggttactcctacttgtatgaaccattgtggtgggctggaatgattacaagtaagtcaaaatttctaaatataagtaattattcatgctaatacttatcagtgtgatattgacagtattcagtgctgttttccagtgattgttggagaagtagctaactttgcagcatatgcctttgctcctgctatcttagtaaccccacttggtgcgctaagcatcatcatcaggtaacagctagcacctacacttccctaatcttgagatctcctgctgtttatattttcatcagtctgttcattcttcatcttagcatatttcttctacagtgctgttcttgcagatattatgttgaaggagaagcttcacatatttggtatacttggttgtgtcctctgtgttgtgggttcaacaaccattgtgcttcatgcgccgcaggagcgtgaaattgattctgtagctgaagtgtgggctcttgctactgaaccaggtactgtgttgctgacaattgaatctcaaaaacattactggccacatttttatctcgtactaaggttttagcttttgccttgcagcctttctattttatgcagtcactgtgcttgctgcgacttttgtgctcatattccgctttatcccccaatatggtcagacacacattatggtgtatattggtgtttgttctcttgtagggtctctctcggtatgtgttccatgtgttaataactcttttcaattgatattcataaaatactgttgagtagttaagctgttctagtatcctctattcataaaattgtgtatattgctgcttttggcaggtcatgagtgtgaaagcacttggaatagccttgaaactgactttttcaggaatgaaccagctaatctatccacagacatggatgttcaccattgttgttgttgcatgtatactaactcagatgaactatctaaacaaggtaaccatgatttctggcctaaaagtgaactatcattatatcataatatgttttcatgtcatccaaggtccaaggaacatgaacgaaattggaacatgaacgaaattgtactggaatataacatgccataatggacactagctagctattaaaattagtatcacaacacctgattctgcctgtttagaactcaggcttgatatacatgcatgactgtacaatgtccatcactttacagttcaatatagcttgttaaatgccctaagcttactctgtttccttttacaggctcttgacacattcaatactgcagttgtttcgcctatatattatacaatgtttacatcactaaccattttggctagtgtgataatgttcaaggtaacatcttttggcttctatgaccttctgcattgatgtatgccaggcatttctttagcttaacttttaaaactgcaagtttggcataaatgaagcaaagcttgttttgactagaattttacattgaggttgcttatatatagctttcagatgctaatgtaatgtgttggttactcggagtattgtcagattatatttttcagcacaaaagtatatccttctctgcattttgtcaacagcaatatgcttttttttatttccatatttgtacataggaattatgataaataagggagataactgagtctcatcagaacaaatcagaaactaggaattgagctttaacaccttcatgtttctcatttattttcccttctttctccaatagtttgagcgtgtgacgtacaattgattcttgaaccgctctttacagtatcacctattgtcctgaacctcatcgccgttctatttgttcaacttttttgtgagatttctatcattagcattgtcgggacaaataccatgctgtaagattttgctgaagcatacactgctgaaatttattaccattctggccatctgcttctgtggccaccccataatacaagggcacatgtttctgtagaaactaagtggcatttcttgctagatgagtacagaaataccgatcctattcactctataccacattttcctagttaatatggagtatgtacttgtgtgcttagtactctgctaaggctgtaaaaaaaactcgagggcacttaacagtctttgcttaaggcttgtgagctactcgagctcagcttgttctgggcttggctcaagcctaaaacgaactgagatcaagcctaaggctcgtgctccgcattgagccaagctctaatgcatgcataaggattatgctcttctcatagcctgtcaatctctcatgctttacctgctctacattgaagttttcaattcctcaatgtcaagcccaaggctagtgcagtaatgctagctatctgcaatgcatcctagttgcatgccagtatgccacacatcatcttattcataccggtggcagccgcctgtctactctccttgctccttctctctatttctccttctgtgagctgctagtgtgaccagggcagcagggtactcccctgctggtctgctggataatacatctccaggcatcatcaccaccgcggtcctggtgagattccgagctttgtgtagccgagctcaagcaggcttgagcttcatccgagtcgaaacttagactaattacaagcttgaaggttagtctaggctcagattgagctcagctctagtttatgtggagcttgagcctgggacctaagcttgctcgagctcagcttgctgacagctgtactcagtgccagtaatgcatgtttggtttatgcccaactttgtgatgatgggttgagacagctatggcttagagtctggaagccacaactgtggcagtggactaaactccttataatgtgtggtgtgactaagattgcatggaaagttaggcatcaaagttaacacttacaatccttctcttctatcaagattagtccaactcatatcatccccaaatattttgtttttgagggcagtcactgacttactggccattacctgataaatttgattattatttgaagctgtagacattgaaccaactgtatgatccatgacaaagctattgttttgaagttccctaggcaatcctgctatcaatgcttgacctgttcaacttgattaaggagtgtttagatccaggggtgtaaagttttggtgtgtcacgctaggtattatatagggtgtcgcatggggttttcggacactaataaaaaaactaattacagaatccgtcagtaaaccgcaagatgaatttattaagcctaattaatccgtcattagcaaatgtttactgtagcaccacattgtcaaatcatggagcaattaggtttaaaagatttgtctcgcaaattagtcgcaatctgtgcaattaattttttttagcctatatttaatacttcatgcaggtgttcaaacgttcgatgtgacagggtgaaaaattttggggtgggatctaaacagggccttaactttgttgctagtcagttgatttggctgttggctgaattgttacgctacatggacatagaatctttatataattttgagccttgtggttgtggtcaatattatgccttgcagcctgtcccatctaacttaaatataaactaaaatataaaatacttcttgcagtctgcaaaacttaaatataaactatcactgctgtccactgtcctatcagttatacatgtagcggtggaaacctgctgtgcttagtgaacaagctcaagttgtgttgtggataactaatatacttgcatgcaggactgggatcgtcaaaatccaactcaaattgtgacagagatgtgtggttttgttaccatcctttctgggacgtttcttcttcacaagacgaaagatatggtcgatggtatgatttcatactctttctttaatttgcaaaaaatatgtttgtgaattctcactctggcctcgtaggactcccaccaactctacctatccgaataccgaaacatgatgaagatggctatgcggctgaaggcatccccctcaggtctgctgctgaaggcctccctcttaggtcaccaagagcagcagaatgattttgaccagcgaactgcaagcaatcccagccattctttcattccatacaaattgtagatgtactttaggtcttataaggtaaaagctcggctcccctgtaatttttgagacatcggtacagattggggatagataccccttatacatctcaagatacccagaatgggttagaatcaaaaaggttttttggatgtaaatcccgggtgatggtctgatagatgcatatgccgttctttggaactgttgtattctttgaaatgaacaattagaagtaggaagagcaactccaagaagataccattgctgatttccgtcaagaaccttttttttttacctccccttcattcaggctgctggatctattttcattatctgttgctgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0882300, RefSeq:Os01g0882300