Os10g0521500

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Revision as of 08:45, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0521500| Description = Esterase/lipase/thioesterase domain containing protein| Version = NM_001071626.1 GI:115482995 GeneID:4349145| Length...")
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Gene Name

Os10g0521500

Description

Esterase/lipase/thioesterase domain containing protein

Version

NM_001071626.1 GI:115482995 GeneID:4349145

Length

3720 bp

Definition

Oryza sativa Japonica Group Os10g0521500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:20636956..20640675

Sequence Coding Region

20637187..20637205,20637307..20637575,20638799..20639010,20639811..20640078,20640164..20640457

Expression

GEO Profiles:Os10g0521500

Genome Context

<gbrowseImage1> name=NC_008403:20636956..20640675 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:20636956..20640675 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgctgcttctactgggaataatgggagcccgccggtggcgcttctggtgctgatggcggcggcgatggtggccgggtggttcgtgaacgccgtccggccgccgccgccgacgccgtgcggggcggagggcgggccgccggtgacggcggcgagggtgcgggtgcgggacgggaggttcttggcgtacgcggagtccggcgtgaggcgggaggcggcgcggttcaaggtcgtctactcgcatggcttctccggcggccgcatggactcgccccgcgcttcccaggcgttgctgaaggagttgggggtgtacatggtggcgttcgaccgggcggggtacggcgagagcgaccctgacccgaggaggtcgctgaggagcgcggcgatggacatccaggacctcgccgacgcgctccagctcggccccaagttccacctcatctgctcctccctcggctgccacgccgcctgggcctccttcaagtacatcccccacaggttggccggggcggcgatgatggcgccggtgatcaactaccggtggccggggttgccgaggggtttggcacggcagctgtacaggaggcagccggtgggtgaccagtggtcactgagagtcgcctactacgcgccatggctgctgcactggtggatgaaccagacctggctgcccacctccaccgtcatctccggctccggctccttccccaacgccctcgacgagaagaaccgcctcatggccctctccaccggactgttccagaagaaggcgaggatggcgacgcagcagggggtgcaggattcgttctaccgggacatggcggtgatgttcggccggtggccggagttcgagccggcggagctggagaagccgccgttcccggtgcacctgttccagggcgacgaggacggcgtcgtgccggtgcagctgcagcgccacatctgccgccgcctcggctggatcagctaccacgagctcgccggcgtcggccacttcctctcggcggtgccgggcctcggcgacaggatcgtcaccacgctcctgccggcggcggcgtaa</cdnaseq>

Protein Sequence

<aaseq>MAAASTGNNGSPPVALLVLMAAAMVAGWFVNAVRPPPPTPCGAE GGPPVTAARVRVRDGRFLAYAESGVRREAARFKVVYSHGFSGGRMDSPRASQALLKEL GVYMVAFDRAGYGESDPDPRRSLRSAAMDIQDLADALQLGPKFHLICSSLGCHAAWAS FKYIPHRLAGAAMMAPVINYRWPGLPRGLARQLYRRQPVGDQWSLRVAYYAPWLLHWW MNQTWLPTSTVISGSGSFPNALDEKNRLMALSTGLFQKKARMATQQGVQDSFYRDMAV MFGRWPEFEPAELEKPPFPVHLFQGDEDGVVPVQLQRHICRRLGWISYHELAGVGHFL SAVPGLGDRIVTTLLPAAA</aaseq>

Gene Sequence

<dnaseqindica>232..250#352..620#1844..2055#2856..3123#3209..3502#aaagggttgcttctccactaaaaaaattcatcagcaaatgctccactactatactattcagctcgatcgcactagcttagctaagcttgcttaattagctcaattacctaactcgtattaagaacactaacacaaacacatacacaatccgaacacagctgcttcttctccaactagctacctacctagctcgcttcctttggctctcaagcttctcatcgtacgtctccaatggctgctgcttctactggtaacttactgcaagaagtacatgcaaagctgaagattaatgcagcagatgaaaccattagtgagatgatactatgcgtgttcatgtgtttgcttttgcagggaataatgggagcccgccggtggcgcttctggtgctgatggcggcggcgatggtggccgggtggttcgtgaacgccgtccggccgccgccgccgacgccgtgcggggcggagggcgggccgccggtgacggcggcgagggtgcgggtgcgggacgggaggttcttggcgtacgcggagtccggcgtgaggcgggaggcggcgcggttcaaggtcgtctactcgcatggcttctccggcggccgcatggactcgccccgcgcttcccaggtttggttaccagagcgatccatccatcctttgaattgatcggacggttcaaaacagggtaaattagtgcacttcttgggccgttttttttttttttttggaaataacgaaatagtccctcctccatctacatttgatagtcatatttcatcttggcacacagacaaaaaaataagtaattaattacttatcatccatttaaacatattaatcattcctcgtaaataagcgattcattaatatttacatttctcgatgcccatgtagccaatcttgtgtggagaaatggagaatcgcacattaaatccgagaaagtcattaaaatgatagatcgttggattgaaatatgcctatcaaaaataaattttttagatttagaaatatacatatcaaaagtagatggaaggagtatatatgatggctttttaaagtgattttaggatgtttgttaccaatattttgagtgtaaattaatttggtatctcggttgtatatatcagtttgcatatttctttcgaggtgatcgatagaaacgacatcttgaaatatttaggcctgaaataattcaaaaattgaatatgttttggctagaatttgaatatattatgttaaatctaagaaaaaaaaaggaaaataaattttcggacggaatagtttcctagggaccaaaattttaaaattttcaaaactggaatatctacttctctgtattttagagaccaagagtaattagaatttttcatttaaaaaatttaatatctcttaagaacagtaaaatttctcttcttttagacagtgaattttctaggttttcatatatatttttttttcaagacatacacatttaaatacaaataaatactccatccgtcctaaaatatattggattttagatggatgtgacacattcatctaaattcttttatattttaagacatgtataagcagacagaatacacgggtgatgtcatgcaacgattatacatgcagaaatgttacaaaggaaaaagaaaccgtcctctcgtgcctgaaatgaaagtggcggtggcaccagctgccgcgccgccccagcacatgatacacgcgcggcagcgcacgcacgcagacgccgctagtgcgcgccgccgccgacgccgatgccgatccacccatcgtttcgccgaaattttggttgtgttgggttggtgtggctgactggtcggctgtggcgtggatggatgcaggcgttgctgaaggagttgggggtgtacatggtggcgttcgaccgggcggggtacggcgagagcgaccctgacccgaggaggtcgctgaggagcgcggcgatggacatccaggacctcgccgacgcgctccagctcggccccaagttccacctcatctgctcctccctcggctgccacgccgcctgggcctccttcaagtacatcccccacaggtaaattccaacacgacatacggcttccgtcaaagttgcatctaaagaccatatataactgtttacaaacaacaacaatactataatacgatataatacgagtacaaaataaagtactctctcttatcagtattatagaccagaccggagtgagtatcagtcatacacatttgatatttgcgataagatccaatcaaacttttatgtcgtttaactattgaataattgtaagtcaattttatagaactattgatgttatgactaaactattataaaacttttaatatgttatatcacaaaaatatagatttagcatcaattttatcacaaaccgatttaagtctaaatatcacaaaactacgaatttcatattgaagttaccacgcaaaactatatattttaaaatatgaatccctaacactaccattatattcgagctataaatgttgtacttttatgattaaatttgttacttaatttgtaattttatgaaattttatcttaaatccaagtttcatgataaattcgattctaaatctgtaggtttgtgatacaatcttcttaaatctataatcttatgacggtttgcacaaagtatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatagttttgtgaaattcactagaaaaattttaaatcttttaattacgatcgtaaagagcacgaagtttgtgctcaatatactgatcggctgtgctgccattaattggtgtatatgtgagtaggttggccggggcggcgatgatggcgccggtgatcaactaccggtggccggggttgccgaggggtttggcacggcagctgtacaggaggcagccggtgggtgaccagtggtcactgagagtcgcctactacgcgccatggctgctgcactggtggatgaaccagacctggctgcccacctccaccgtcatctccggctccggctccttccccaacgccctcgacgagaagaaccgcctcatggccctctccaccggactgttccagaaggtcccagaaccttccacaattcttctagcttccatggctgatagctagacagtgacacagtgtgcatgcattttgatttttgcagaaggcgaggatggcgacgcagcagggggtgcaggattcgttctaccgggacatggcggtgatgttcggccggtggccggagttcgagccggcggagctggagaagccgccgttcccggtgcacctgttccagggcgacgaggacggcgtcgtgccggtgcagctgcagcgccacatctgccgccgcctcggctggatcagctaccacgagctcgccggcgtcggccacttcctctcggcggtgccgggcctcggcgacaggatcgtcaccacgctcctgccggcggcggcgtaacagctcagcgacggcacaggcaaaatgctgaagagaagcattttgtgtgagctcagctacactgtaccgtacaaaagagattgatgagattatggatgatctatatagtattatcattaagatttaagagggcaaatgactgatgccattgtacatagattctcaacatctttaccagaaaacaaatcccaaccaactcctgcaatttacatacagct</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0521500, RefSeq:Os10g0521500