Os01g0883100

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Revision as of 05:14, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0883100| Description = Similar to PISTILLATA-like MADS box protein| Version = NM_001051547.1 GI:115441464 GeneID:4325001| Length = 2579 bp|...")
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Gene Name

Os01g0883100

Description

Similar to PISTILLATA-like MADS box protein

Version

NM_001051547.1 GI:115441464 GeneID:4325001

Length

2579 bp

Definition

Oryza sativa Japonica Group Os01g0883100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:40077275..40079853

Sequence Coding Region

40077540..40077677,40078384..40078428,40078546..40078575,40078695..40078794,40078910..40078971
,40079053..40079119,40079477..40079664

Expression

GEO Profiles:Os01g0883100

Genome Context

<gbrowseImage1> name=NC_008394:40077275..40079853 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:40077275..40079853 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggcgcgggaagatcgagatcaagaggatcgagaactccaccaaccgccaggtgaccttctccaagcgcaggagcgggatcctcaagaaggcccgcgagatcagcgtcctgtgcgacgccgaggtcggcgtcgtcatcttctccagcgccggcaagctctacgactactgctcccccaagacctcgctatcaagaatcttggagaagtaccagaccaattccggaaagatactgtgggatgagaagcacaagagccttagcgcggagattgatcgaatcaagaaagagaacgataatatgcagattgagctcaggcacttgaaaggtgaagatctaaactctctgcagcccaaagagctcatcatgattgaggaggcacttgacaatgggatagtgaacgtgaatgataaactgatggaccactgggaaaggcacgtgagaactgataagatgctggaagacgagaacaagctgctggcttttaaactgcaccagcaagatatagcgctgagcgggagcatgagggatcttgagcttgggtaccatccagacagggactttgcggcccagatgccgatcaccttccgcgtgcagcccagccaccccaacctgcaggagaacaattaa</cdnaseq>

Protein Sequence

<aaseq>MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVG VVIFSSAGKLYDYCSPKTSLSRILEKYQTNSGKILWDEKHKSLSAEIDRIKKENDNMQ IELRHLKGEDLNSLQPKELIMIEEALDNGIVNVNDKLMDHWERHVRTDKMLEDENKLL AFKLHQQDIALSGSMRDLELGYHPDRDFAAQMPITFRVQPSHPNLQENN</aaseq>

Gene Sequence

<dnaseqindica>2177..2314#1426..1470#1279..1308#1060..1159#883..944#735..801#190..377#cctcgaaagcctcctcatcaccattcctcttcctcccatggcgaactcctttactcctcctccacccccaccgcctcgcccatccacaccgacgccaaggcagcgcttgttcttgttgttgttgttgttgttggcttcgctttgctgctaagctagctggaggaaggaggaggaggaggaggaggcgggatggggcgcgggaagatcgagatcaagaggatcgagaactccaccaaccgccaggtgaccttctccaagcgcaggagcgggatcctcaagaaggcccgcgagatcagcgtcctgtgcgacgccgaggtcggcgtcgtcatcttctccagcgccggcaagctctacgactactgctcccccaagacctcgtgcgtccccccctcttctcctccccctggttcttttgcacataatatttttcagtgtactctttgtctagatgataaggtatatatgcaagaatcgttttgatgcaacaactaggttgaagatttttactctactccccaaaaaaagggaaaagggagatttttactctaccaacttgccaggaccggaactgtgtttttgtattggttaaagtcagtttcttttgcaggaaatgccatgtccttactctttttcctaaaatcggttttgagttatgctgatatagtatcttgaaccactcgcatctgttgcactgacatgcttgattaaccttccaatggtgggacatgtataaggctatcaagaatcttggagaagtaccagaccaattccggaaagatactgtgggatgagaagcacaaggtatttcagagctacaatagtacactgtttttagatccggaaagagtgatttctgactgatgagcacatgaatcttttcagagccttagcgcggagattgatcgaatcaagaaagagaacgataatatgcagattgagctcaggtaaattcttcagcctttaaatagggttgtttccttttcatttggacttcagtattactgtattggtatctgcggagattacagtcaaacccgttgtcatggattcatggtacaggcacttgaaaggtgaagatctaaactctctgcagcccaaagagctcatcatgattgaggaggcacttgacaatgggatagtgaacgtgaatgataaactggtaaatatgtcttttgcatttgccttctcaattcttttaacctttcagcagttgaccatataggtattagcactcatgaaatttctttgctactgatgttgctttgtttgttggtatagatggaccactgggaaaggcacgtgagaactgtatgtatgacctagtttggattattgaatatattactatttctcatgtgttttgttagccacgggaggtttccttttatattttggtctcattattgttatcttgatcaaccgaaggataagatgctggaagacgagaacaagctgctggcttttaaactggtgggttaatttgcagagtgatctggatttttgaacttcaaataaattgtctgcataccatttcacttatgttcagcatgtaagctatgtttgcacattgttttagtaacctcttttgatttagattataactatggattatctacttgattataagaaaaaattaaatatttttagaaataaactcaatagatcgttagtggtctaagcaatggagtagaagaatgttttctgaagcatggggcaaataatctgttttgataatccaacgagtaatctgaaaagaagaggagttttagctatcccatcgtatgaatgctttcgtcataatttctatgaccatttttttttcagtgataacttaatgttctataaggaacccaaatgaaattcctaaggtgttaaaagcacccaaggatctttccatcagttatggaagctggcaatattaagcaatcagaggatttaaatgctttgcatatcctgatttctatcacacattactcattttcaacaatgaattgaattctgctttaccttgtactagtataatactgccacagcccacataaggaaatcaactactccttacctaagccacagcccacataaggaagtataaattagacttgcagtgcctgcaagatgtggtagtttatcatatactctcttacctaagccattttttttcatccttctcatccagcaccagcaagatatagcgctgagcgggagcatgagggatcttgagcttgggtaccatccagacagggactttgcggcccagatgccgatcaccttccgcgtgcagcccagccaccccaacctgcaggagaacaattaagctgctaggttgccccgccacttcgatcagttatctcatccactgatccaccactggattgaatgtcctagtgcattgtcaactgtatccctgttttcatgtctgtttcgatgaactattgagcatgtcatatgtgagttgctttgtgtgccaatatatagtctgtctctagtacaagctctgtgcttgccattctgcctcgctgtagatagcaccagcaatggagctagctcagatatcagtaacttcgtgcaagctgcaaggt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0883100, RefSeq:Os01g0883100