Os01g0883200

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Revision as of 05:14, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0883200| Description = Hypothetical protein| Version = NM_001051548.1 GI:115441466 GeneID:4325002| Length = 3417 bp| Definition = Oryza sa...")
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Gene Name

Os01g0883200

Description

Hypothetical protein

Version

NM_001051548.1 GI:115441466 GeneID:4325002

Length

3417 bp

Definition

Oryza sativa Japonica Group Os01g0883200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:40085026..40088442

Sequence Coding Region

40085094..40085150,40085292..40085382,40085472..40085584,40086026..40086112,40086430..40086552
,40086646..40086780,40087025..40087072,40087581..40087682,40087909..40088304

Expression

GEO Profiles:Os01g0883200

Genome Context

<gbrowseImage1> name=NC_008394:40085026..40088442 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:40085026..40088442 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtgaattttccggcatggcaacgactggtgcactgtattctggacaagtaatgccaatcacttctagagacggttctggtaccaaacctaaaggcactagacttgagagagctattcgggatctgcaaaagattgctgctgaatacagaccaccagctatcgatattaacgaggtagatccaaatggccaggtagcagttaaaagacggttgcctccagaagtaaaacaaaaactagccaaagttgcaaggctatcggcaaaccatggaaagattcaagaacatgagttaatggatcgcctcatgggcatagttgggcatcttgtgcagcgaaggacactcaggagaaacatgaaagaaatggtagaatcaggtctgtccgctaaacaagagaaggctgataaattccaacgtgtaaaaatggagatcaatgaaatgatcaaatcgcgtgtggctgccaaggccaaggtcaatgaacaccacagtggatcagctgatgattttcagattgcgaatgatgaaaaaagatatttaaaaggaaagtctgtaatggatgctgctttggaggacaggatctgtgatctgtatgatctgtacgttgagggtatggacgaagataagggccctcaaagcaggaagttatatgtggagctggcggagttgtggcctgaaggttccatggataatgtcggaatcaaagatgcaattaatagatcgaaggagcgaaggagatcattatacaaccagcagaaggttcgcaacgaggagagaatgaagagaaaaaggttggctgcggcagctaaactgcaagatggctaccctgttgtaatgcaaagcgcactgatccagcaagtggcacaaccacccataacaaaccctgtcgccacataccctgtgactgaccagggatcaaaaagttttgacagagttcgtgaaataagtgcgagtgcaaatcctgacgacatcaaccggaacactggcgagatgaagaagaaaaaaagaaaaccagaatctgaccttgtagatacacaagctaacgccatgaagggcccctctcagcatgtagagaagaacaagcctcctaagcgtgctgatgaggcagttgaaaccgtgctttgtctcccgttctatgaccaacaaccgagctga</cdnaseq>

Protein Sequence

<aaseq>MGEFSGMATTGALYSGQVMPITSRDGSGTKPKGTRLERAIRDLQ KIAAEYRPPAIDINEVDPNGQVAVKRRLPPEVKQKLAKVARLSANHGKIQEHELMDRL MGIVGHLVQRRTLRRNMKEMVESGLSAKQEKADKFQRVKMEINEMIKSRVAAKAKVNE HHSGSADDFQIANDEKRYLKGKSVMDAALEDRICDLYDLYVEGMDEDKGPQSRKLYVE LAELWPEGSMDNVGIKDAINRSKERRRSLYNQQKVRNEERMKRKRLAAAAKLQDGYPV VMQSALIQQVAQPPITNPVATYPVTDQGSKSFDRVREISASANPDDINRNTGEMKKKK RKPESDLVDTQANAMKGPSQHVEKNKPPKRADEAVETVLCLPFYDQQPS</aaseq>

Gene Sequence

<dnaseqindica>69..125#267..357#447..559#1001..1087#1405..1527#1621..1755#2000..2047#2556..2657#2884..3279#aaaaaagagcctatactggggaaaatcgagatccatcaaacaaaattcatcgaaaagaaaaacatggaatgggtgaattttccggcatggcaacgactggtgcactgtattctggacaagtaatggtaagagctattctgttcgtcgcatgacttgtgcacaaaatgaacataaatcctcatgcagtctatatatagctgtatatttgacctgtatgaccttataaacatgcatgtttactcaattttactcgtatttcccagcagccaatcacttctagagacggttctggtaccaaacctaaaggcactagacttgagagagctattcgggatctgcaaaagattgctgctgaatgtgagtatcacatggcttttccttgctttatagcatggatcacggagtagttctgaaagtaacttcaggtacttggaatacttttgcagacagaccaccagctatcgatattaacgaggtagatccaaatggccaggtagcagttaaaagacggttgcctccagaagtaaaacaaaaactagccaaagttgcaaggctatcggtatgtggtagcataaccaaatctacctgtgattccattttatcaaatgtgtgaattccatgtgtttttatatgtgactgttaacagaattttttcagccttgtatacttgctacggaaatttatggtttatgtacccagtatatatgcatctcttttacgcacaatagtttttctctaagagcggcattggaagctactggtgtcgcttaaacttgtgaattatgtaaaatacctagccttttcttattctcaactgtagttagtgagatattagttcatttgcactaagtgctagcactgcacggtttgtgaatcgatatcaagctacaccagaacccgttttcccttttgacatttatgtgctcaatttcatgaaccctgtactgcctacctgccagcttttaatagttcatacttctaatacatttgatctgtgcaggcaaaccatggaaagattcaagaacatgagttaatggatcgcctcatgggcatagttgggcatcttgtgcagcgaaggacactcagggtaaataatgggagtaattaaacatttccttagtacctgaaattttgctagtataggatagtggttgcttattcttttgatttgaccttttgctttttgcatttttcagatttgataaaaaaaataaaactgctctgttaaaaagaaatgtttttttaaaaatattttaggtatgaacatgatctccaatacataacatttcataccacttctcgtagtaacttgttggcaatcgctcaaactacatgtccatgagattgcactctctgtttggttggtccgtctgatctgtgtgtttttttgttttgttttaaaagagaaacatgaaagaaatggtagaatcaggtctgtccgctaaacaagagaaggctgataaattccaacgtgtaaaaatggagatcaatgaaatgatcaaatcgcgtgtggctgccaaggccaaggtaaatggaagcaggatgtttcgatggtaattggagtcgcatccttctttaacacttctgattatagatgtcatgttttatacatgccaccaggtcaatgaacaccacagtggatcagctgatgattttcagattgcgaatgatgaaaaaagatatttaaaaggaaagtctgtaatggatgctgctttggaggacaggatctgtgatctgtatgatctgtacgttgaggtataagcatgtagatatattatgtttttcaaggttctattggtcttatcattttgatgttggtggaaataaatatacaagtatatgtggtttttactcttcataacttttagtagctaaacaagtagcagatttgctttagaacaaagctgatttcagtgacataccagctttgcccctctttttaacttgtttggtttcgtctgtaaatgtacatctatctgcatacttgttactttgtcagggtatggacgaagataagggccctcaaagcaggaagttatatgtggaggtaattgccctgactatttatatttgttaacagctagaaggaccattatgatgtctgttgaaagaactcgtgatacttttaccagatcttttctctctttacgagattcctttccttccgcattgtgattcagaacttgtgtaactgttgatgttttgacccttgtcattacttattgacctctatgcttttccatgtcagaattatattttgcttagttgagcccaattgcctggtctccccttaatattacacgtatatttaaaaatcaaatttgacaaattaattgccgtgctgcttccacttgttatccagtttttcttcctttaactgtttgtagatgtaattttaagctgggtgtttatttgcttgcatttctatacactataagtagttaagcggattgttcttttggttgagatatcatttctagctgtactatttatcttagggccctttatcttatggtgctctgcatgtctttatatgcctatattggttgtgccagctggcggagttgtggcctgaaggttccatggataatgtcggaatcaaagatgcaattaatagatcgaaggagcgaaggagatcattatacaaccagcagaaggtcatcagtcctttccctttttcttaaaaaaatgcatgcctgtctatagattgaagttatcttgtgatagtatgaaacattatgtcaattgtcacatggcaattgaatagttcatgcaactcttgctgcaaagtcattttttggacgaataaccccttaaatgtttttttataaaaaatacatgcacatgatgtaactcattattttctattcttaattaatccaggttcgcaacgaggagagaatgaagagaaaaaggttggctgcggcagctaaactgcaagatggctaccctgttgtaatgcaaagcgcactgatccagcaagtggcacaaccacccataacaaaccctgtcgccacataccctgtgactgaccagggatcaaaaagttttgacagagttcgtgaaataagtgcgagtgcaaatcctgacgacatcaaccggaacactggcgagatgaagaagaaaaaaagaaaaccagaatctgaccttgtagatacacaagctaacgccatgaagggcccctctcagcatgtagagaagaacaagcctcctaagcgtgctgatgaggcagttgaaaccgtgctttgtctcccgttctatgaccaacaaccgagctgattgttttggtgtatgcattgatgaaatttcaatcctcctaggcgcttgtcggatgctgtaacaaatacccttgtggagaggatgccattggtccttcgtaatttttatgatctatatagttccttttccagccacagc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0883200, RefSeq:Os01g0883200