Os01g0883300

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Revision as of 05:14, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0883300| Description = Conserved hypothetical protein| Version = NM_001185751.1 GI:297720636 GeneID:9267982| Length = 5213 bp| Definition ...")
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Gene Name

Os01g0883300

Description

Conserved hypothetical protein

Version

NM_001185751.1 GI:297720636 GeneID:9267982

Length

5213 bp

Definition

Oryza sativa Japonica Group Os01g0883300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:40090338..40095550

Sequence Coding Region

40090338..40090367,40091815..40091863,40092025..40092179,40093121..40093510,40095527..40095550

Expression

GEO Profiles:Os01g0883300

Genome Context

<gbrowseImage1> name=NC_008394:40090338..40095550 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:40090338..40095550 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacaatgtcaaaagaaataaagaagcaaacaataattagcatgattacacaagcccatggcctcgtggcaaccatgacaagagtaggctgtggcagttggcttgaggtggcgacgactaggagtgacgatggcggtgttgaagtgaggctgcttgctcccttgttgacggtgatgtggttcggaggtctgctcgtaccttggaaacaacaaagcggcgcggaagccctacttggagaaggcgatgcagcatggacgacgagagctcgacaacacggcttggaggtgtggatgcgatgtcacgctcaaaagcccaagctcgcgtcgcaagcgcatggcagggaggccgagctcgctggtggtggctcgatttctcgatctggatctagggaggaagaccccagcgaacacagtatccagatacaggtgatatggttggtcttcgtgaggggactggcagctggtgctcgactggtggcggtgacggtctggctccttggctcgacgtggagcttcatcagtccagctaggtggcgacacagatcatcatggcaatggccgttgtgcaggcgttgctatggagctctcattcaactccacttcaagagatctcttcgggtgatcaggggcatcttagagcagatctga</cdnaseq>

Protein Sequence

<aaseq>MTMSKEIKKQTIISMITQAHGLVATMTRVGCGSWLEVATTRSDD GGVEVRLLAPLLTVMWFGGLLVPWKQQSGAEALLGEGDAAWTTRARQHGLEVWMRCHA QKPKLASQAHGREAELAGGGSISRSGSREEDPSEHSIQIQVIWLVFVRGLAAGARLVA VTVWLLGSTWSFISPARWRHRSSWQWPLCRRCYGALIQLHFKRSLRVIRGILEQI</aaseq>

Gene Sequence

<dnaseqindica>5184..5213#3688..3736#3372..3526#2041..2430#1..24#atgacaatgtcaaaagaaataaaggtataatcctccctgcgtaaggatatacatattagtgagattgttcttgattcccacgaatgagaatgacgatatacatattagaactctacctttgtagccaagtggtggagtccagaactttctcatcaaaaaaggatatacatattagtgggattgttcttgactcgagaaaaaaaaaggatgacaaggaatcaatcaatgaggtggttccttgctccatgaacaaagtaaagagcgacaataaggaaccaattagtaagtggttatattttcttgtgttgtgcataacatttacttgtatgtgatgtccacaagaagtgcattaagtatgaacttgcatgcacacataggaacatattaaaggtttgattgaaagaacatctaaattaatgaagatagaagattacatggacaaggtgctaagacttcattgatgttgtatatgagatagtcaaagactccaaaaccaaggacagaaagtcctcaccgatgaggacatgcataatgaggaatgcaatagtgaggtgattcctaatactatagacaatgaaccaaaaatatgaattccacttgcttttgttgttttgctcgtgcataaaattttgctcaaatgataagtgtgcatggttacataacacacaacagggtatttaaacaaatacgcacggtctagctgcatgtgccaacacttagaattacaataaggatggagggagtaggtggagggtatttactcattacaagggcatcattggtagaaaaactacacgcctagataactggatggatggattgtgatacaagatgagaatgacctatgacgtagattaagttcatcatgttgcatattgcaccttattccatgcttaggtaaagagaatattagatatctattatgaatcataagttcctaagatatgttcaagtggctgcgtgataggtgagtaagataaacatcgaggatatgaaggtggcagacaatagtggtagagcagtggtaggagtggttgagattggtgtggtataagagcatatatatatatatatatatatatatatatatacatgataaagtgttaatttgttcaatccttgcctaagttccattaatataccatgtttccattcatacttaacaacgaaaacctaaaaggtctggaaaaccttcattacaccatggaaaaaacaattataaaggtgggagatgaatagagtaagagagcttgacctcaagacgtacatgctatgatttgattgggagaatgtgcaccgagagatcaattgagaaaatgaattgatcctattacatgatatagaccgagtttatggcatgatggtcccccacgtggatcgatgttaaggccacatcacctttgagcattctccattgcctcaaagggtgtttgatcattaaatggttctccacgactcaacctaacatatgcttaggcctacccaaatgacaccaattgtaattccaattaaatggacacttaaaacatgtccatcagtgtgatgcgcatttgttgtcttgctctatgggataaaaaaaatacaagataaatatcgtcaatacatggaaagatcctagatcattttaggaaggtgtcttagtaaagaagggcaaaggtactctttccctatcatcaagaccttacattaaaagttcacctctccctcgaactccgtcaccagtagggatggcaatggggctgccccaattgggttgtgccacctcgtccctgtccgcgtagcaaaaaagttatctcatccccatccccatctccgcacacgagggagggtttgccctcatccccactcccgtgcgggtacaggccacccatcgggtgcccacacccaacaatgatatctcataaaatagtggatacaaggaagcaattcataatattcaagctttacaggtagaatattggccatttaaccgtgattaagacaacaagacttagccaaatgagttaatgaacaccaaacttcaccataatctgtctctagaagcaaacaataattagcatgattacacaagcccatggcctcgtggcaaccatgacaagagtaggctgtggcagttggcttgaggtggcgacgactaggagtgacgatggcggtgttgaagtgaggctgcttgctcccttgttgacggtgatgtggttcggaggtctgctcgtaccttggaaacaacaaagcggcgcggaagccctacttggagaaggcgatgcagcatggacgacgagagctcgacaacacggcttggaggtgtggatgcgatgtcacgctcaaaagcccaagctcgcgtcgcaagcgcatggcagggaggccgagctcgctggtggtggctcgatttctcgatctggatctagggaggaagaccccagcgaacacagtgtgagatccgaccgtgtgacctagggtttatttagagcccctaatagatgtattccccaccggggattggggtttgtggccccattgccatccgtaatcaccggcctagcctaggggcataaatttgcatcgttccattcatcatcaggttatcgatgccccaacaaactatttcgccacttggcagcaccgagaaatgagaaaaattagggcatgcatacccaggagagattcaaattggtctcggtggtcgtgacatgaaggtcaaattgggacgccaccaccatcattgtttccaacccaagcatcagtcctgcaattatcttcttagcccacactttcatgcttgcaatgcccttgaatggcttattgcttgcaggcatgtgcttgccttgcatgatgcttgggcttctggctcacgaccctttggcttcttgggaccctggcctaaggaatcattgtcatgatacatgtgggagtactggatggggttggagttggagtggttgagaggatcaatatggagagagaaaataatgtgcacaaagccagattgagaaggttgggacgaaaatggaatgcgtataataagtgattttgatccaacttggattcagattttgtaaggactcccgtgccgctatcccttggcgacataagaggcgaaacagccttgagcggaagcttccccaccgcatcctgctcaagtcgacatcggcgatggcaatgatggcgtcttccaccctatcctcccttactccttccctcttcctttcccttcctcattttctctggttccaccttgactcgccaccgttagcgtggccaccagcgacgacggtaccggcggcggcagcacctccctccccatccccttccttcctccccaactcttccatcccctcatttcctctcccttttccttttatctttttttgtagatccagatacaggtgatatggttggtcttcgtgaggggactggcagctggtgctcgactggtggcggtgacggtctggctccttggctcgacgtggagcttcatcagtccagctaggtggcgacacagatcatcatggcaatggccgttgtgcaggtagttgcggtgtgcaatagtgcatgtagcttcagtgtgctggcgacatttggtggcttccgttgtggacgctttggttggatgggactccaaggcgatagcctttctcggcttgtcggtgctaacgacagcgatgccttcatgtgttgttcttcttgaaggcgttgctatggagctctcattcaactccacttcaagagatctcttcgggtgaaaaccttgatacgtttggatcaggcgatgtcgtcattctgtcggcatgtccttctggaaggctttgttttagaagttttccccttgttggattgttgttcttaggtttagcgtgtcgatgccagggttttcatcgatttcccataaattaaccgtgatactgtaagtttttgggtatgattttccttataaagtggatcaactctcttcttctttagtgaaatgtaggagatccctgcccgttccctcgaaaaaagaaaataagtgtttttctagaatagtacaatgaagataggagcataaatgtgccaattaatgcttttgagcccggtgagggtaatagtggtgtaatgatcctcaggccaactaagctcggtcgatgggtgattgccatcaaaatgggctcgaggtgaataaaactgcaccaggcatggtccttaataagtaaatttgccgttggttcggtaatcgtagcctatttctatacctagacatattgaggtaggtgtacgtacaactagacaagcaaaggaaaatgacgaggaaggatactgcaatgggagtagaaagtgatgtactacctctgtccacacatataagagcaaattttggaaaatatcattggtgagaaaagtgagttgcaaaatgattatatacaagataaaaatgttttgggataaaaggttgcttatattgtaagcctcaaattagtggtgtataacattaacattatgtaatatatttccttaaggagattatttaatctatgtgtagtactaatatgtaaggaagacaataaaggataagaattaatgaattcttccattttattatgggcttcaagatcaagagcatttaccaattagggagtggtgctaatctactttcctagcattactatttttccataaatgatggtttttatatattttgaaatagaaaccacctagtgttttgttataaagataaccttctcatgattaccagtttttagttaaaacatttactacatttgaggatatatgctatatagtctatgctccatattacataatcatggcaatcaatagttgagccaagtagtacaaaagttacaaatactcctatcatctacagacagatctcgcaatggtatctatcatattttatccctatgagttaatttataaaaatagcatagaatggtcaaaaaaagaccaacgcttactataaatgcgacaacataagcttgttttatgtttttgctagcatattatttttataaaaaacaaatattgtgtaaatagttgacatcttttcatgaatatgacatgtataaattataggcactcaaacaaatattgtaaaaatgacatataacccattagcctatactagctaaacaaaagaggggatattaataatatattataccagttgctcatgttgtttgcgcctcttgtaggtgatcaggggcatcttagagcagatctga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0883300, RefSeq:Os01g0883300