Os01g0885000

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Revision as of 05:14, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0885000| Description = Similar to Cytochrome c| Version = NM_001051556.1 GI:115441482 GeneID:4324880| Length = 2793 bp| Definition = Oryza...")
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Gene Name

Os01g0885000

Description

Similar to Cytochrome c

Version

NM_001051556.1 GI:115441482 GeneID:4324880

Length

2793 bp

Definition

Oryza sativa Japonica Group Os01g0885000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:40199474..40202266

Sequence Coding Region

40199546..40199657,40200755..40200888,40201890..40201979

Expression

GEO Profiles:Os01g0885000

Genome Context

<gbrowseImage1> name=NC_008394:40199474..40202266 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:40199474..40202266 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacattctccgatgcgccgcccggggacgcggcggccggcgagaagatcttcaggaccaagtgcgcgtactgccatgccgtcgacaaggccgccggccacaagcatgggccaaacttgaacggtttgtttgggaggcaatctggtacagctcctggtttctcttacccatctggcgacaagatagtgcctgtgatttgggaagagaacactttgtatgactacctgcttactcctaagaagtacactcctgccaagatggggttcaatggactgaagcagccacaggaccgtgctgatctcatcgcatacctgaagaacgccacagcatga</cdnaseq>

Protein Sequence

<aaseq>MATFSDAPPGDAAAGEKIFRTKCAYCHAVDKAAGHKHGPNLNGL FGRQSGTAPGFSYPSGDKIVPVIWEENTLYDYLLTPKKYTPAKMGFNGLKQPQDRADL IAYLKNATA</aaseq>

Gene Sequence

<dnaseqindica>73..184#1282..1415#2417..2506#gtcgtccatcccctctccatcagtcattccaaggtcaacccaaaccctacctggtccgcgagtgcggtggcgatggcgacattctccgatgcgccgcccggggacgcggcggccggcgagaagatcttcaggaccaagtgcgcgtactgccatgccgtcgacaaggccgccggccacaagcatggtgagccaccgaaccacctaatgcatatagctcagtgttcgtccggttggaggattgttagattgtggaggtttctgcatcgttttactgctctgatgcgtgatggcagggtttccaggttgccatcagatagttggtttgtgtaatatatgctacttagatcttacagctagcacgtgtctgtcgctgatgtttgatttttgaaatcaccatgaatcatacgagggacatgcgttgaccatcttgctggatttgctggttagctggtaatatgcatttaagctctctgagctcttctctctcgatgtagtatactcagggccaggtgtacatatgctagttttaatggtaattctaatgatcctatacatctttggcggttatatagtcttcgtttatcggctagtctgtgaaatgtcaattattaggccctgtttgattcagcttaggattattataatctggattattatgagtaagccaaaacaaacaagtacttcctccgtttcacaatgtaagtcattctagcatttctcatattcatattgatgttaatgaatctagatagatatatatgtctagattcattaacatcaatatgtatctatctagattcattaacatcaatatgaatgtgggaaatgctagaataacttacattgtgaaacggagggagtagattattatgatagattattataatctataagccagattagtataatctaataatctcctatggaggagctttttctagattattgagtggctaaagacccactatccttagatgcctccaataatccagagaaacaaacaactcgcaacttattctatatcagcttattataatccagcttagagtaatctgattgaataatctggattacaataatcttaagctaaaacaaacagggccttaaccatttccatctggtactgttctgtgcagtagctgtgtatttcatccaatgacacttttcagagttcaattcatttgatctgttcatttcatctgtgtagtattctccctctttttcttctttaccaaccagatgctgatatgtaattactaatgtcaatgctgtcctttgcagggccaaacttgaacggtttgtttgggaggcaatctggtacagctcctggtttctcttacccatctggcgacaagatagtgcctgtgatttgggaagagaacactttgtatgactacctgcttactcctaagaaggtgcgaccaatgttaactttccatcacttctgttttctaatcagtagtgtaacttcaaatgtgtgcgtcggcgatgtgcattttgtgaccagatatttcatttgcaatgttgtcccgtgccaatgttgccagtcgaagtgatcattgttaagtccggggactggaggactttgcaagctttgttgtcacttgaactgatagtgttttgtgaactttgttagtgttgctgattattctacagcatgccctcgcgctgccacgctgtggacctaaattaaagatagtcgcctccctggaactcataagtggtagcttctgatgtttatattgattgcccgtgttttttcttgtgtacatgtttcctatttgtgatcacattctaaatcagttgcttttggatccatcattttgtgacaatgaaaatctacgaatatcctcataattatacttataggttttaaatttgaggataattaattatttattgcatcttatattttaaatttgggatcctttgcaatgcgcggatcatcatgctagtatagattaactacaattagctcattgtgctattttgtttctattacgtgtctttgcagatactcttggttctgtgatcccaggcataactcataaagtagcaggattcgcatgaagggtcattgcatcacaagagctgatgcgagtcgatctcaaagaaaaactagagttaaacttttattcatggttatctcatattcagaaaaagcgctgtctactacttcagagcaccttgtctagttgtcttgctagcggtgactgttatgtgctattgctaagtacctctagtgcatccaatgaaatgattttgcccactaccactaccaccacatacacacgcggtatatcttaaacgcttgcacatcagatgctgaatatttcagacatatttgtcagctattacagggcaattcatttattcaatatgatctcaggacattactctttgtttgcatatgcagtacactcctgccaagatggggttcaatggactgaagcagccacaggaccgtgctgatctcatcgcatacctgaagaacgccacagcatgagagtccctgctgccatcttcctaagatgaagagaagcttattgctcgtagcctcatactgactctttgtaacttgtaaggtgaactttgcaacaaaactgtgttgtaaatttgtaataataagcagtggcctcgtggaagagacgatgtgcagctcatccacttgggcagctgcgagctattctttggctgtgttctttgacgtgggttgggaactaatcccatgcataaacagagcgacagataaatatattttttaaataagataaatgatcaaacagtataagc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0885000, RefSeq:Os01g0885000