Os01g0886000

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Revision as of 05:14, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0886000| Description = Protein of unknown function DUF179 family protein| Version = NM_001051562.1 GI:115441494 GeneID:4324886| Length = 28...")
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Gene Name

Os01g0886000

Description

Protein of unknown function DUF179 family protein

Version

NM_001051562.1 GI:115441494 GeneID:4324886

Length

2848 bp

Definition

Oryza sativa Japonica Group Os01g0886000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:40247120..40249967

Sequence Coding Region

40247378..40248055,40248753..40248880,40249686..40249944

Expression

GEO Profiles:Os01g0886000

Genome Context

<gbrowseImage1> name=NC_008394:40247120..40249967 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:40247120..40249967 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgggccctcaccccaaacagcggtgggtcctcctgcctcccggcgaggcgcaccccgccgccgctcgccgccgccggcgaggccggctcgctggccgcggggcccgggaggtggtgctcgtggaggcgtcgtcagccggcggagcggtggcccaagctggcggtcagcgcgtcagggaggaagagcaagggcggccgcgacgagggcggcggcgacgagcccaagaagaacaaggcggcgtcctcctcctcctccggaaaaggtgatgcgtctgctcccagtggagatgtttcaaataatgaactgcaatccaatgacacaatgtatgtacctggtaacttgtcatattggagagacgttagagcaagctttgtggttccaaaggtgcaaacagtagatgcacatactctaccacaagcagctacggatgcaccagtgcactgtcttcctcggaagtgggcacattctattccaatgccagaatctggttgtgtgctggttgctgctgaagagcttgatggcaatggtacgtttgagagaactgtaattctcctcctaagattaggttcaagagatgcctatgacggcccatttggcgtcatcctaaaccgtccactgtatacaaaaatgaaacacgtgaacccatcgttccgcaaccaggcaaccccttttagtgattgctccctcttctttgggggacctgtcgacatgagcatattcttgatgaggactaccgatgacagaccaattaaggggttcgaagaggtgtcgccaggcgtctgcttcggtttcaggactgacctagagaaggccagtgctcttttgaagagtggcgcggttaagcctgaggacttaaacttctatgttgggtactctgcctgggattacgaccagttgttgagcgagattgatcaaggatactggcatgtcacttcctgtagctcaggcctgataagcgactcccttgcaacagatccttcttgcctatggactgagatattgaagctgatgggaggccagtacgcagaactgagtcaaaagccaaaggaagatggctcgtga</cdnaseq>

Protein Sequence

<aaseq>MWALTPNSGGSSCLPARRTPPPLAAAGEAGSLAAGPGRWCSWRR RQPAERWPKLAVSASGRKSKGGRDEGGGDEPKKNKAASSSSSGKGDASAPSGDVSNNE LQSNDTMYVPGNLSYWRDVRASFVVPKVQTVDAHTLPQAATDAPVHCLPRKWAHSIPM PESGCVLVAAEELDGNGTFERTVILLLRLGSRDAYDGPFGVILNRPLYTKMKHVNPSF RNQATPFSDCSLFFGGPVDMSIFLMRTTDDRPIKGFEEVSPGVCFGFRTDLEKASALL KSGAVKPEDLNFYVGYSAWDYDQLLSEIDQGYWHVTSCSSGLISDSLATDPSCLWTEI LKLMGGQYAELSQKPKEDGS</aaseq>

Gene Sequence

<dnaseqindica>1913..2590#1088..1215#24..282#caacccccctcgcggccaccgacatgtgggccctcaccccaaacagcggtgggtcctcctgcctcccggcgaggcgcaccccgccgccgctcgccgccgccggcgaggccggctcgctggccgcggggcccgggaggtggtgctcgtggaggcgtcgtcagccggcggagcggtggcccaagctggcggtcagcgcgtcagggaggaagagcaagggcggccgcgacgagggcggcggcgacgagcccaagaagaacaaggcggcgtcctcctcctcctccggtaggttctctcggtcgattgaaaccgatggtgcttccggtttgtgcgtacttgcgcgattgggatggtgaaggttggggggtctttgtgtgggaagcggtcaaacctttgtagattcgatgcgggttggagtgatcggcgcagggggggtgaggtttcttcgttggaagttgttcaaattgagtcatgaaaatggttgcgttagaacttagaacacttactagacatgggatcgagattggggtttattatgtatttcagtggatttcttagccgtaatgtttcatgacgtttgggggtaaattttgtgctggtaatgaacgaattcgacgtatttacgattgggatatctttggagattgaaatgtttctggtgcaagtatggtgcaattggtgtaaaatggtttgctatgcttatttggtcgtagaaatgatcgaaatctgattatttatatgatttttttctctgaaggtttctgattgcttgttttgtattctagcttacactgctaaattagcatattacatgtgtttggcatttcttattttcttagtattagtataaaaagacaatgtaaagtggatcattggatgcgagctttatggaatgcaaatggataacttttgagttatgtggtggtggcaccgtggcagtttctttcattgtgttattaaaaataatatatatttctttcaatcctcataagatacatgtgttttttgtggaaaacataattcatgaacttgattgattaactagtcgtaggtctcaccaaatgaccaaatcgataatttctacgtacaggaaaaggtgatgcgtctgctcccagtggagatgtttcaaataatgaactgcaatccaatgacacaatgtatgtacctggtaacttgtcatattggagagacgttagagcaagctttgtggttccaaaggtatggccaatcagtttaaactaatttaatctaactgtggctatccactttttttaatgtaaatgaggttaataataggtcatctgttctttacaatattttcttgctagataatttgccgagattttggcttcgcaccttgcgttagctctattctaacgactacataacacctctgaaataatttgttgtcggtaccatatgggaaaggaagcaactagtcgatctctgtagttttagttgccctgtatgttcacctcagctttatacctatttttacactttctgaaaacatctatctgacaacatgtgctctcttaagaattactgaattaagacaaggaaactgtatcggatggtcatggtgacaccatcatgttataattattctagattcaactttccattctactttagattatcgtgaattggctggaacattttgaaattatcacatgtaccttgttttgacattctcactgcaagtaatgctgcaggatgtttcagcgtgtaattgatagttcacaagtattcactatgcttgtcctgaacaacatccattttgccctgtctagaaaaaatattttttttctccataagcaaagtaatatcctgtctctacataactataattggtgtttttgattatgtaatactatctcattgctgcctattctctgttatgttttcaaatcaggtgcaaacagtagatgcacatactctaccacaagcagctacggatgcaccagtgcactgtcttcctcggaagtgggcacattctattccaatgccagaatctggttgtgtgctggttgctgctgaagagcttgatggcaatggtacgtttgagagaactgtaattctcctcctaagattaggttcaagagatgcctatgacggcccatttggcgtcatcctaaaccgtccactgtatacaaaaatgaaacacgtgaacccatcgttccgcaaccaggcaaccccttttagtgattgctccctcttctttgggggacctgtcgacatgagcatattcttgatgaggactaccgatgacagaccaattaaggggttcgaagaggtgtcgccaggcgtctgcttcggtttcaggactgacctagagaaggccagtgctcttttgaagagtggcgcggttaagcctgaggacttaaacttctatgttgggtactctgcctgggattacgaccagttgttgagcgagattgatcaaggatactggcatgtcacttcctgtagctcaggcctgataagcgactcccttgcaacagatccttcttgcctatggactgagatattgaagctgatgggaggccagtacgcagaactgagtcaaaagccaaaggaagatggctcgtgaaaattcttgcttgctagcatagtttggcacaattgacgtgcttggtttgtacataattgggaataatctcgcccggtcactggccagggtaattgaacagtcctagtagtagtttcatgtggtcgtctttgtcctctgtattacttgaacaaatattatggagtactggtgatagaacggtgtgggctgtgaataattactggaattacatgcttccatcaattttctatgtgccacataaaaatccgaaattgagat</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0886000, RefSeq:Os01g0886000