Os01g0886200

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Revision as of 05:14, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0886200| Description = Similar to AGAMOUS homolog| Version = NM_001051563.1 GI:115441496 GeneID:4324888| Length = 4207 bp| Definition = Or...")
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Gene Name

Os01g0886200

Description

Similar to AGAMOUS homolog

Version

NM_001051563.1 GI:115441496 GeneID:4324888

Length

4207 bp

Definition

Oryza sativa Japonica Group Os01g0886200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:40256727..40260933

Sequence Coding Region

40256826..40256903,40257691..40257893,40258966..40259047,40259240..40259304,40259502..40259601
,40259888..40259929,40260074..40260115,40260239..40260520

Expression

GEO Profiles:Os01g0886200

Genome Context

<gbrowseImage1> name=NC_008394:40256727..40260933 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:40256727..40260933 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gttgtcttctccaatctccactccccacccatcgatcaactcacagctcgatccagccccctccagatcttcagatcggtggatcgattgatcaacatggggagggggaagattgagataaagagaatcgagaacaagacgagccgtcaggtgaccttctgcaagcgcaggaatgggctgctgaagaaggcctacgagctcgccatactctgcgacgctgagatcgcactcatcgtcttctccagccgaggacgcctctatgagttctccaatgtaaacagcacaaggtcaacaatcgagaggtacaagaaagcctctgccagcacttcaggatccgctccagtgatagacgtcaattctcatcaatactttcagcaagaagcagcaaaaatgcgccaccagatacagaccttgcagaatgcaaacaggcacctcatcggtgagtccattggcaatatgaccgcaaaggagctcaagagccttgaaaatcggcttgaaaagggcatcagccgaattcgatcaaagaagcatgagctgctgttctcggagatcgaatacatgcagaaaagggaagcagatcttcagaacgagaacatgttcctgagagccaaggtggcagaggccgagcgagctgaacatgatgatcagcaggcggcggaggacgacgagatggcgccggcgccggcggtcggcggcgggtcatcgtcggggacagagctggaggcgctgccggcgacgttcgacacaagggaatactaccagccggcgccgccggtgagcatgctggccgccgcggcggcggcggcggcggcgcagtactcgtcggaccaccaccagactgctctccacctcggctacttcaaggtcgactccggcaaaggcggcctcctctag</cdnaseq>

Protein Sequence

<aaseq>VVFSNLHSPPIDQLTARSSPLQIFRSVDRLINMGRGKIEIKRIE NKTSRQVTFCKRRNGLLKKAYELAILCDAEIALIVFSSRGRLYEFSNVNSTRSTIERY KKASASTSGSAPVIDVNSHQYFQQEAAKMRHQIQTLQNANRHLIGESIGNMTAKELKS LENRLEKGISRIRSKKHELLFSEIEYMQKREADLQNENMFLRAKVAEAERAEHDDQQA AEDDEMAPAPAVGGGSSSGTELEALPATFDTREYYQPAPPVSMLAAAAAAAAAQYSSD HHQTALHLGYFKVDSGKGGLL</aaseq>

Gene Sequence

<dnaseqindica>100..177#965..1167#2240..2321#2514..2578#2776..2875#3162..3203#3348..3389#3513..3794#ataatgtgcatcagccataactaccagcacacacaacgactacccttctttaaaaggaaacctcacagagcccaaggcttctccatgccgttgccctaagttgtcttctccaatctccactccccacccatcgatcaactcacagctcgatccagccccctccagatcttcagatcggtaagaaaaccgtagtgaaagctagctctttctctctctctgcagattgattggatggagtagtatttgcttttctttgcgccattttgtgctgttcttttggggcagatttgttgagaaacagcaagccctagggcctgcaacgagctgatggaaaggggaaattgaaacataagcagctgcagcaagctgcttgctagatcttgttgtgttgccatttctgcggttctctcctttgccctcttctagctatgcttcttgttcttggaacttgtggttcttttgggggggggggggggggggttcttcaagtgctatatatggatgaggtgttcaaatggataatttgctcctgaaatttcttcttttgctctaaagtcttgtccatctttgatgaagttatgttaattatttccccttcttgaatctttgagttaaggttcttttcgtgttagatcgttcagaacttcagatcgatgctgatgaagattcaaatggtgaacttgagactgaagtttagcgattgaactaagtaataacgataagacatgaatttgtaaaaatccgtgattattcaagattttggttggaccaatatttcctctgaacaaaccaaaaacaatatatgttgtgctttcctagctagatagctaggaatttcttgctttattatatgctgataagtttatgcgcttttactccctttatcttgcttaattgcttctgccatgaattgctaagagggaggtgttgcatggttgtacatgtacatgtttaatttgtgaaggtggatcgattgatcaacatggggagggggaagattgagataaagagaatcgagaacaagacgagccgtcaggtgaccttctgcaagcgcaggaatgggctgctgaagaaggcctacgagctcgccatactctgcgacgctgagatcgcactcatcgtcttctccagccgaggacgcctctatgagttctccaatgtaaacaggtataagtatgcatcatgcatgcatccccatccaccattgcacttcatttaattaatttgctatctgcaacttaattggaaacaattaaagggcaccacacttgactcatgtgtgtgtgtgtgtgtataattaagttgtgactgatcataaagcatttaagcttagatgttttgctgagatagattcaagatgggcggactagtagtgtagtttgtcagttagcagatgcttaattatgagcttattactagtgtacattagtatatctctgtgcaatttgtgtggatcttggaaatggacaacctgtaacagccttgggctagatcttgttcattcatgaaattatacctccacaatcagtccatggtcaaaattagaacacaagggacttgaaggagtaatccattccaagctttcagtcttgagatgtctcaggcagccagtcttgaaatgttgccaggcaagccggcccctgaaaaagctctcgtttcattttatgtgcactgacaagtactcgctatctgatatttctctatctctcggagagagaatgtatgttgcatggggaaggaaattgcaggttgtccctgttcatcttccttggcagtgctaaagagcgttaaagaacgccattgactgtgcctgtgtttttgcagcgagtatggagtattaattcaaatgatgtatctttggcccctctgcatcttttggtgcaacgtaaaggccacaaatatatatacatctgtgacacgtcgtagtgcaaacctatctggagtgaatctttgaatgtgtatcaagtattgcatggtctgctaccttgtgctgtaggctctagcaaagctagggggacagcatacgcatacatgcatgcatgcagcatgcattttactagtagttttttttttttatgttctgctgaagttggtttctgaagctatctttcagttccatttcggtatatatcatgtcatttttctgctaaaaaaatgaagatttgctaattttcatcaaacaatggtttaataatttgtgaaactatactgcttcgttttgacaacacatttggttcagcacaaggtcaacaatcgagaggtacaagaaagcctctgccagcacttcaggatccgctccagtgatagacgtcaattctcatgtaagttgttttgtattcattaattggttatatactgtatatccatatgtataatatatatagcacgcatcgtttatatatttaatttggcctgaaattttacccgtaaataactaaatatactacatacattgtgagatttgtgtgttatcttgagccctctaaaatccagtactgggtatcttcacacagcaatactttcagcaagaagcagcaaaaatgcgccaccagatacagaccttgcagaatgcaaacaggtaattaagcccttaaatccaacatctcgtattgtgatagcttatggctatagcacaatatatattatgcgtctcatgtctgagttaaaaaaagatccatctcatgctgtcatgcatgcatgatgaacgcgtatatagtatatctgaaagtgttcatatatttcatatatattaattgcaatatataatcttgtcaggcacctcatcggtgagtccattggcaatatgaccgcaaaggagctcaagagccttgaaaatcggcttgaaaagggcatcagccgaattcgatcaaagaaggtgaaaatatatataatcgagacaccatgagcacatgctaattataatcaatggattatatatatgtcaacaatgcaagaagatctttgaaatattaattgcagatttataaattatgcgaagaaatttcttgtgtagtaatatgatttcaccaggggttattaatagttggatttgcttaattatactgaactgacaataatacacgtacactatcaatttcaccctgattaattaatctatatatgtctaatttgattcctgattttttccccccacttttcagcatgagctgctgttctcggagatcgaatacatgcagaaaagggtatgcctcgctaaatcgaatactcagatacactatcaaaatttgcatatgcacacgcttaattacttattgtttaatttatttctcccttgcaataatgtacatgatcacacaatgtctttcatgtttcctcatcgcgtgcaggaagcagatcttcagaacgagaacatgttcctgagagccaaggtgagttatccttacactgtcaataatcatgacctgcatactgtaaaaattaaacaacttagttaagtcattagtgatattactactgacagtaattaatttatcgattttacattcgtacaggtggcagaggccgagcgagctgaacatgatgatcagcaggcggcggaggacgacgagatggcgccggcgccggcggtcggcggcgggtcatcgtcggggacagagctggaggcgctgccggcgacgttcgacacaagggaatactaccagccggcgccgccggtgagcatgctggccgccgcggcggcggcggcggcggcgcagtactcgtcggaccaccaccagactgctctccacctcggctacttcaaggtcgactccggcaaaggcggcctcctctagatcgatcgccatggatgcaaatattgcatgcattcgatcgaattatactgtattccgtaagagcgacgacgatgaagatgacaataattattgtggtattgtacgtatagtacgctggtagacctacgtatacgtatacgtatgtatgatgaagaataaggtggtgtttggttggaggggctaaagtggggctaaactttagttcctctcacaaaaatataagttcctattatagagacttatatttttgtgagagagactaaatttagtcctagttcccaaacacccctaatatacatttgtggtgtgcatgcatggtgtgtgggtactatatgatcagagtgtgctgcatatgcgtattccgtttgctagctctgacatgcatttgtctaaatatatatttttatttatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0886200, RefSeq:Os01g0886200