Os01g0886300

From RiceWiki
Revision as of 05:15, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0886300| Description = KH domain containing protein| Version = NM_001051564.1 GI:115441498 GeneID:4324889| Length = 4345 bp| Definition = ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0886300

Description

KH domain containing protein

Version

NM_001051564.1 GI:115441498 GeneID:4324889

Length

4345 bp

Definition

Oryza sativa Japonica Group Os01g0886300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:40264970..40269314

Sequence Coding Region

40265472..40265581,40266168..40266253,40266940..40267085,40267405..40267521,40267616..40267732
,40268446..40268589,40268687..40268839

Expression

GEO Profiles:Os01g0886300

Genome Context

<gbrowseImage1> name=NC_008394:40264970..40269314 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:40264970..40269314 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgataggattccgccaccctcgcccttgcagtactcgccgtctcccgtccattcttctcctcaccccctcagttctttgaggtattcttcctctgaaagagagagatatctggctgagttgcttgccgagaggcagaaattagctccatttgtacaagttcttcccttctgcaccaggctcttgaaccaagagattctgcgggcgtcttctttgccacctaaccataattttgttgatcctgagagaatcgagcatggtagcccattgaggttacctggcctcccagtgaatggtcagccaatggatctggagggatggtcagggatgcaaacagagaatatgagggttctgcaagcatcatctatgggctggaatggtcctccagcaattactggcacccctgttgtcaagaaagttgtgaggctagatgttcctgtcgacaagtatcctaattacaactttgttggtcggttgttggggccacgaggtaactccctcaaaagagttgaagcttcaacccagtgtagggtttatattcggggacgtggttcagtgaaagattctgttaaggaggacaagctgagagataaacctgggtatgagcacctgaatgaaccgctgcatgtgcttgtggaagcagagttcccggcagatattattgatacccgtctaaaccaagctgtgactatcctagaggatcttctcaaaccaattgatgagtcaatggactactacaagaagcaacaactgagggaattggccattctaaatggcaccctgagagaggaaagcccaagtcctcacctgagccccagtgtatcccccttcaactccaccgggatgaagcgcgcgaaaacagggcggtga</cdnaseq>

Protein Sequence

<aaseq>MDDRIPPPSPLQYSPSPVHSSPHPLSSLRYSSSERERYLAELLA ERQKLAPFVQVLPFCTRLLNQEILRASSLPPNHNFVDPERIEHGSPLRLPGLPVNGQP MDLEGWSGMQTENMRVLQASSMGWNGPPAITGTPVVKKVVRLDVPVDKYPNYNFVGRL LGPRGNSLKRVEASTQCRVYIRGRGSVKDSVKEDKLRDKPGYEHLNEPLHVLVEAEFP ADIIDTRLNQAVTILEDLLKPIDESMDYYKKQQLRELAILNGTLREESPSPHLSPSVS PFNSTGMKRAKTGR</aaseq>

Gene Sequence

<dnaseqindica>503..612#1199..1284#1971..2116#2436..2552#2647..2763#3477..3620#3718..3870#ctcctttgggtttgtctctacctctctctcctcccttctcccacccaccccttctctctctacctctctctcctcccccttgtgggtgtgtgctgtggtggagaggagaaagggaggaagaagaggagagcaagaaccaaaaaccaagagctgctgccaaccctgcacagcctgggcttgtgatcattgattgcccaactattactaccttcctgtttttttcttctcatatagaagaatcccatctatctatcccttatacatatctcttcttctctttggttcttggaaatctcccatctcttctagatttcctttgtggcttcaagggcctccacaccatatcttgattagtagttggttgctcttcttcttgttcttggttttcttgattgcttagggggttggaattttgcggttcttggtttcttggtctttccccccaatctttgcaagtcttgtagagagtatttgagttgttccttccgcttgttggggagccatggatgataggattccgccaccctcgcccttgcagtactcgccgtctcccgtccattcttctcctcaccccctcagttctttgaggtattcttcctctgaaagagagaggtgggttcatgcttcgtgctcttgattttgttttatttttttattcctgcgattggtttcctctctatttttaggtcgagttttgtttaggtatttgatcctgtttctggaaatctttatgagggggtacgagattcgggtgccatcggtggagatttctgcgtaattctgaccttctggatgtgatgtttggcattgatcaatgctgccgatgttggtggaggagtgatctgtggaaatagggcttttcgtgattgcttgctgatagatttgcaagtgagggtagtagaagatggctattaggaatagatagagccattttttgtttgtttggctgatgcttgatgtaaaatttgtgtgtaatagattgctcattgttaagagccgcatgtactccatattcttttatggatcttgctgtataatttcttattaaagttcttatttttgagtttattacattgtgggcttatagttattttacggttctatattttagaatattgtttaattatttcaattctctcatggaaatagtaaagtcagagtaactagtgttatactgatgagattgtttgtgtggcagatatctggctgagttgcttgccgagaggcagaaattagctccatttgtacaagttcttcccttctgcaccaggctcttgaaccaaggtcggtttcctttgctttcgtgaatactgtaatgttgcttgtttatataggtccttaccagtttaaaaacctaatcttgttaatgccctgatgaagtagtatattttgttaccaccatttgctatctttagttcacctttgagccgtctaggttgcagattgttaagttatagtaaatgctatgacgtcttgatggtcacctcagctattttagggtcatacttttttttgcgggggttggtatcatactgttgatagatcagaactcagaagaagagtatattacaaaggatacatttggctagatgttcttttggtcagttcacttaccacatatattattgtctactcctgagataattcacaggaagttgatttttccagtagaggctacgttaacaatgcatgtaatcgacttcattatgtacgatagatgcatttatgtcaaccaaaaatttcatcgtaagaatgtccactctgcactgtattcatattctttaactgaatgaagtgttttatatccttactacagtagttcaagttattatacaaatctaacaatgtaacttgtaccgcccacccattccgtgatataggaagcagatatactgccactgccattgttaaactattataagcggctgcaccaacattttctcatcatgatcatgtttcatttgatgcagagattctgcgggcgtcttctttgccacctaaccataattttgttgatcctgagagaatcgagcatggtagcccattgaggttacctggcctcccagtgaatggtcagccaatggatctggagggatggtcagggatgcaaacagaggtaatgcaacttctggctatttttggttatcattgactttttttttcctgcatgtctcattgatgcattcaaataacatgtgtgccctaagttatattactgaaagcgcatgatcattatttctccatgctggatatgttgtttctatatattgccacgtaattaatgcagaggagttgttgcatgaataagtgcctttttatactctgttcatgacatggactacaggttcacacccatagcagtatggcacttcatggcttatcaacccttgaagcttctctcatcgtataacggtgtcttgttctttctttttcagaatatgagggttctgcaagcatcatctatgggctggaatggtcctccagcaattactggcacccctgttgtcaagaaagttgtgaggctagatgttcctgtcgacaagtatcctaatgtacgcttggattttttaatgtttctcatgctttcccttagctttcttgctatgccagatcatgaatggtttgcactcttttgttgcttttcagtacaactttgttggtcggttgttggggccacgaggtaactccctcaaaagagttgaagcttcaacccagtgtagggtttatattcggggacgtggttcagtgaaagattctgttaaggtatctaaatgcacactgtagttccctgtaattcccctgttctaacatgattgtttggttaaaaacacttttttggcagtaacttgtttttgttattaattattatataggttttattaaaaaaagaggacattctcactttcatggtcatcattatgtcgcctaatctgtttcgttacaatatcataagcaattaatcttaacttgcagctggtccatattgatatacaaccattacttaattaaatacaattaattgcatggttaaaggcttagaattagattacaatctccagacaacaatagttacatagaaggagctgtgcatcatgctagttaaggttaaaaacccatgctctattttcaatgtcaatagcatagatattctagtattatgagctgcaacgtaaggctcagtaagtatgtaatttctatcatgaacttgttagtatattgcccagaaatatttgatatcaatgctcgaacttcattgaggttgttttgctggggttcggttgtcccagatattggtctagggcatgctaatgacatgatgcttatggtttggtgggatgaggcgaactatctttcacaatacagttaatagtttttttttctgataatggaaattggtccagcctctacatgaagaggtatccagccaacattacagtttatttagagcttaatgccctgatgtttttctaacacaggaggacaagctgagagataaacctgggtatgagcacctgaatgaaccgctgcatgtgcttgtggaagcagagttcccggcagatattattgatacccgtctaaaccaagctgtgactatcctagaggatcttctcaaaccaattgtatgcacccccgctcttcttcgctgtcatcatcttggataacttaaacgcatcatgttaaatattaatatggtgttatctggcctgcttttgccaggatgagtcaatggactactacaagaagcaacaactgagggaattggccattctaaatggcaccctgagagaggaaagcccaagtcctcacctgagccccagtgtatcccccttcaactccaccgggatgaagcgcgcgaaaacagggcggtgatctcggttccgaaagcattattattctccaaatctggtcatggtttctatgtctgatcacatgctgctgtgctttgctggagatgattggtgatgcatatgctgggatcatcagtgctgctggcctatgcctgtcatgatctgccttgttttatcatccttgggggtgaatgatcctctctgtgggcttgatgtttgacggtattattatttattctttgtgcatctgacttctgaatattaacattattggtttgggtaagttaacaacaaggcccggtttggccaatctagaaagaattgggatcccaagtgtcggacaataatcaggttttgtcggtgtacctgaaagaaatagtagtaatttgtcaaaggggctggtgctcttgtgtgctagtgcttagtacaagacagccaagcaatgaagcaagtatagctgaagagacaaccctccattaatgattatttgcattcat</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0886300, RefSeq:Os01g0886300