Os01g0886500

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Revision as of 05:15, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0886500| Description = Conserved hypothetical protein| Version = NM_001051565.2 GI:297598075 GeneID:4324890| Length = 2395 bp| Definition ...")
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Gene Name

Os01g0886500

Description

Conserved hypothetical protein

Version

NM_001051565.2 GI:297598075 GeneID:4324890

Length

2395 bp

Definition

Oryza sativa Japonica Group Os01g0886500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:40273696..40276090

Sequence Coding Region

40273899..40273995,40274268..40274442,40275834..40275969

Expression

GEO Profiles:Os01g0886500

Genome Context

<gbrowseImage1> name=NC_008394:40273696..40276090 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:40273696..40276090 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgttcggcggcaggaggggctcgtcgcggtggggcctcccggtggtgaggtcggaggcgctcggcaagctgggcccctcgttcggcatcggcgccggctgcggcgtcggcgtctgcttcggcctcatcggcggtgcaggaattggggctggattccctggtttgcagttgggattgggagctggtgctggatgtgggataggaataggttttggctatggttttggaaaaggaattgcatatgatgagaacgggagatattcaaacatcaggagatcatttcagaattccagaaaccttccttacgatgaacagtttgatatcctatttgacgagatgatggagagcaccaggaagctgatcaaagcgacatcaaaggagatcgataagtggaggcggatgtag</cdnaseq>

Protein Sequence

<aaseq>MAFGGRRGSSRWGLPVVRSEALGKLGPSFGIGAGCGVGVCFGLI GGAGIGAGFPGLQLGLGAGAGCGIGIGFGYGFGKGIAYDENGRYSNIRRSFQNSRNLP YDEQFDILFDEMMESTRKLIKATSKEIDKWRRM</aaseq>

Gene Sequence

<dnaseqindica>2096..2192#1649..1823#122..257#ggagaataatctcggaagggtctccctccctcccacctcctcatcctcctcccctcctccggtgagctcagctccgggaagcgcttgcggttgcgcgggaagcgcgcgggcgagggaggccatggcgttcggcggcaggaggggctcgtcgcggtggggcctcccggtggtgaggtcggaggcgctcggcaagctgggcccctcgttcggcatcggcgccggctgcggcgtcggcgtctgcttcggcctcatcggcggtaggcaagcgattcgccatccatagccatcacccgcgctcctccttcctcctcctctcgggcaccttcggtagggttcaacaaggtgttcgcgagggttctagcaggcttcgaactgcctaggcgcgcgtgattgtttcgtcccgcttccctctccaatcggggtgaggcgagcatgggaagtgcaagtgcttctctattaggtttgtccggcatgagcaagtaggttaattatcggtgtttgatttggaattctggtgctatcgcttatcaggttagcgaactcaaatggagtaattggggattctcttatcactgacactttccacacttcttaagcacgtgcactttctctttctcagtgattgagccatagcccctaaatgttggattggaggattctggtggaatcgggtgttttgccgtactgtggagatttctgtgaaaaaacttagtgttctgaattgggcatacaggtttgattcggtccatgtgaaaacctgagtttattgccttggtaaacaacagtgcaaccatccaaattttggatgcggatgactgatcatgaaaacttacaactccattgaaaaagagaattagatggcatatccacggagaaaggttctgcggaaatatttgtagacttgacatgccatgccgttctggtgcttaacaaataaatctcggcgaaaacttaattattaactgtaatacaattggaaagtaccagtggcagactggcactccacttgctaagagccataagtcttccatcctagatggggaacaataatttagatgtgtaaaggacacttctgatgacatcaaatgtatccatctagcctaataaggataatatgtgtttgtcaggacttaaaacgtctgaaaatcacactaatattgccgttccagattgccctcctcagagcagtttctttaagccttcaatatttcattacatgacctctatgttaacagtagtaaagtaagcttactgtgtagtcatattgaagcttgacccttgaaaggttgatgttctctgcaatttatgattgcatatcagtttgtatgactaagatttagattactacgtgtcctgtacattttgctcatttttggcaaaaaaaaaaaaccttttgttccatgtgccagcattgaaggttgaactgttcctcttactgtaataattaaaacttcttttttacaaaatttacagtagaagatgctgtcctcctgaatattcagaaagaaaatgcagttgcaaataataaactatgtaggaaggaactatgtaactaaaccacatctgattttgcatatgccgatcactgacattgcttaatctcccgtgatcttgttctgttccccctcacttttatgtggttgaacaggtgcaggaattggggctggattccctggtttgcagttgggattgggagctggtgctggatgtgggataggaataggttttggctatggttttggaaaaggaattgcatatgatgagaacgggagatattcaaacatcaggagatcatttcagaattccagaaaccttccttacgagtaagcaatctctatacaatcaacctcagctcctattgttcaacatccttacatcatacaatggatttgatctgcctatgtgtgacggtgtgttgttggagatatcaaaaggtctgtacctacttttggtgggaactttgttgaatgtgtagaaggatatcagtgtggtcgtccaactgtttttagttcactgttcctacatataattataaaatcgactagcacgtgttacctcatcttcatgatataattatcttaaaaatcctttgcagtgaacagtttgatatcctatttgacgagatgatggagagcaccaggaagctgatcaaagcgacatcaaaggagatcgataagtggaggcggatgtagatgaaaacagcagtacagcacatgaatgaagaagagcttgatatccactaatagcttgaagcagtacagcacgtgcctaagcgggactgaaatgaaccccttgcttgcttgatgttacagcgaatatgttttcttcttcagggattcatgagatattctgtcaaatattctacaccattggagccccagaagtattaatctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0886500, RefSeq:Os01g0886500