Os01g0889000
| Gene Name |
Os01g0889000 |
|---|---|
| Description |
Tetratricopeptide-like helical domain containing protein |
| Version |
NM_001051579.1 GI:115441528 GeneID:4324904 |
| Length |
4075 bp |
| Definition |
Oryza sativa Japonica Group Os01g0889000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:40406374..40410448 |
| Sequence Coding Region |
40406421..40406562,40406642..40406778,40407416..40407795,40408075..40408171,40408273..40408560 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:40406374..40410448 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:40406374..40410448 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgccgcccaaatcgaaggcggcggcggcggcggccgccgccgcggcggcgcagccggtcgccgtggaggacctcttcaccacgctgcaccgccacatcgaggccggcgagttcccgcaggccgtcaaggtcgccgaccaagttctcgcggcggcgccgggcgacgaggatgcggtgcggtgcaaggtggtggcgcacatcaagtccgatgcgattgagaaggcgctcgccgcgatccgcgccgccgagcgcctcccgatcgacctcagctactgcaaggcctattgctactacaggcaaaataaactgcaagaagctctagacctattgaaaggtcaagaagaaacctctgctattcttcagttggaatctcagatttattataggctaggtagaatgaatgattgcatgaatagctatgagaagcttcagaaatttaaggttgagtcaatggatctgaagataaatatcattgctgctctggttgctgctggaagggcctctgaagttcaggcaaccatgaaggcacaaaaagttgatctctcctcgagggcactcagagatactcgaagctttgagcttgcatataattctgcctgctcgttgatagaaaataaaaagtattcagaagctaaagagcagctggacttggcaaaaagaattgggaaagaagagcttatggtggacgaatatggagatgatgatattgaatatgaactagctcctgtgtctgctcagcttgcttatgtgcatcagctacaaggacaaacccaggaagctatggaaacctataataatataacaagcaggaatttggcagatccctcatcacttgctgtggcaacaacgaaccttatctcgttgaaaggaaccagggacgctgctgatagcttgaggaagcttagccggcttattgaaaaatctactgctcccaaccagttgcaacttatcgaaagccttgaatccaagctatcaccaaggcaaaaagaagctctgtattctgcatatgttcttttactcctccacgcgaacaaaattgatcaggcacatgagtttgtcagtggactacttggtatgtttcaggacagcacattccctgttttgcttcaagctgcagttcatgtgagagaaaagaaggtgcagaaagctgaagaagttcttagccagtatgctgagaagcatcctgagaattctaaaggagtcctcctttcgcttgctcagatcgctgccagtgccaatcattttcagattgctgctgattcattgtctaaaatagttgacatccagcacatgcctgctacagtcgctacactagtagctcttaaagagcgccttggtgactctaatggtgcttcttctgtgcttgattctgctatccagtggtggaagaattccatgactgaggataacaaattagaggtgttcatgcgggaggctgctacatttaagctcaaccatgggcgtgacgaagaggcctgccaattgtatgaggatcttgttaagagctttggaagcgcagaagcgttggcggggctagtagcaacttcagcgcgcaccaaccttgagaaagctgaacagtatgagaagaaactgaaaccattgccaggtctcaagggaattaatgttgagagcctggagaaaacttctggtgcaaggccttttgaggcgcccaaacccatggaacaggacgttactgacgaagtgaagaagcagaaggctaagaagaggaagaggaaacctagatacccgaaaggctttgatccagcaaacccagggccaccaccagatccggagagatggctacccaagagagagcggtcaagttaccgcccaaagaggaaggataagagggctcaggtcagaggtgctcaaggagctgtgtcaagagatggaacttcatctgcgagcgccagttcatcttcgaaagcaaaccaagccaccaaagctccagctgcagccccagaaccaccaaagggttccaacaagtcccggaagaaaaaatcgagatga</cdnaseq> |
| Protein Sequence |
<aaseq>MPPKSKAAAAAAAAAAAQPVAVEDLFTTLHRHIEAGEFPQAVKV ADQVLAAAPGDEDAVRCKVVAHIKSDAIEKALAAIRAAERLPIDLSYCKAYCYYRQNK LQEALDLLKGQEETSAILQLESQIYYRLGRMNDCMNSYEKLQKFKVESMDLKINIIAA LVAAGRASEVQATMKAQKVDLSSRALRDTRSFELAYNSACSLIENKKYSEAKEQLDLA KRIGKEELMVDEYGDDDIEYELAPVSAQLAYVHQLQGQTQEAMETYNNITSRNLADPS SLAVATTNLISLKGTRDAADSLRKLSRLIEKSTAPNQLQLIESLESKLSPRQKEALYS AYVLLLLHANKIDQAHEFVSGLLGMFQDSTFPVLLQAAVHVREKKVQKAEEVLSQYAE KHPENSKGVLLSLAQIAASANHFQIAADSLSKIVDIQHMPATVATLVALKERLGDSNG ASSVLDSAIQWWKNSMTEDNKLEVFMREAATFKLNHGRDEEACQLYEDLVKSFGSAEA LAGLVATSARTNLEKAEQYEKKLKPLPGLKGINVESLEKTSGARPFEAPKPMEQDVTD EVKKQKAKKRKRKPRYPKGFDPANPGPPPDPERWLPKRERSSYRPKRKDKRAQVRGAQ GAVSRDGTSSASASSSSKANQATKAPAAAPEPPKGSNKSRKKKSR</aaseq> |
| Gene Sequence |
<dnaseqindica>48..189#269..405#1043..1422#1702..1798#1900..2187#2898..3863#gaggctcgtgagtcgtcagccctctcctccaagctaaccacatcccgatgccgcccaaatcgaaggcggcggcggcggcggccgccgccgcggcggcgcagccggtcgccgtggaggacctcttcaccacgctgcaccgccacatcgaggccggcgagttcccgcaggccgtcaaggtcgccgaccaaggtaaaacctcctacgcggctccgcggtccctcttccctgaccgcaacgctgatctgatcctcccgggctgatcctgcagttctcgcggcggcgccgggcgacgaggatgcggtgcggtgcaaggtggtggcgcacatcaagtccgatgcgattgagaaggcgctcgccgcgatccgcgccgccgagcgcctcccgatcgacctcagctactgcaaggtgatgcaagtccaccacgttttactcccgttcgcgcgcttgatctgtttgtttacttgttacctggtatccgtgtggtggcgccttgtggttttaggatctaggagtggccactactggccagatctgttaatgtttatggcttgacgtaatttcgcttgtttagcttaatatagagtccaacgtaggatggatttgaaatgatgatgctggcaagtggcaacatgagatttttttgttaacattgcatccagttttactcgagatttttttttttgttaacactgtatccagttttgcccgaggctgtgacccattgtgtgtgttgcatgctgatagaatctgaccgtgtatatatttaggtgaatgaaggagaattttgtgaacaatcatccactcactagctaatgcaagacattgtcaggactcaaaatgctgttgggtagccacgaactgagtgctaattatgattagattcatttctttatcaagtgctgattgtttgctgtttctgtcgaattttattacatatggaaagatcgtacttgacaggacatagatcttttctgtaattctgttaataaaaaatggtatgcttatgctcttaagctaagtatctacttttatctgtattcaggcctattgctactacaggcaaaataaactgcaagaagctctagacctattgaaaggtcaagaagaaacctctgctattcttcagttggaatctcagatttattataggctaggtagaatgaatgattgcatgaatagctatgagaagcttcagaaatttaaggttgagtcaatggatctgaagataaatatcattgctgctctggttgctgctggaagggcctctgaagttcaggcaaccatgaaggcacaaaaagttgatctctcctcgagggcactcagagatactcgaagctttgagcttgcatataattctgcctgctcgttgatagaaaataaaaagtattcagaagctaaagagcagctggacttggcaaaaaggtgattcctcgctgaggaactgatatcttaaatgaataaattctttcagttgcttgaactgattccatttaatcctacttcccttctaatcttaagagcacggtagctgacagttcataggtttttagtagcacgtcttttccattattctagaatcctgaatccttgtttatggataagttgcttggctatcaaaattatgcaagatcagtatattctctcgcaatactttaagagcatgcaacttgttgggttttagctcacttctgtgttcttcagaattgggaaagaagagcttatggtggacgaatatggagatgatgatattgaatatgaactagctcctgtgtctgctcagcttgcttatgtgcatcaggtaattaaatctgggaaatttctcccgtgcaaatagttcaatctatcttttctgtttaattttgagcttcaggcttgtaactattctagctatattttcagctacaaggacaaacccaggaagctatggaaacctataataatataacaagcaggaatttggcagatccctcatcacttgctgtggcaacaacgaaccttatctcgttgaaaggaaccagggacgctgctgatagcttgaggaagcttagccggcttattgaaaaatctactgctcccaaccagttgcaacttatcgaaagccttgaatccaagctatcaccaaggcaaaaagaagctctgtattctgcatatgttcttttactcctccacgcgaacaaaattgatcaggttttctcggaacagttgatccatctcccactttctttttgtagatatatcgtctgttagctagtattattgaggaatgtactgattgttgtgttgtatcttggtatgatatctgatactcatctggcatcactgtgctactgattaactaataattgtttatcatactcattgcatctttataccatcttgtagtttttgttcttgtgtttaccccaagtagtggcattagagatgagcctaatcaaaggttactggttgagatgtgagtgatgggacttaagcaataaggaatattcatttgatgtgaaactagtgaaaactgaaaaggttggtttgcaaatggacgtgttgcatacacatcttatgatctcaaattacttaatattcatcttgtttttcagttgtgcttagtataagatcacaagctctgtttttatcgactttacggtcttacatgtgttgtcagttcagtttagcaaggaaagtgatcatcaccatcatgcctaggagagatcaatataattggtacctttcattcagtatttggactgaacatacagaaatttagcactaataatataaagaattatattctgatagaattctatcagaatagaattctttattggttattactattttcttatcatgttctactgctttactgcttgtttcatttgagagtaatgttgtcttttatattgcaggcacatgagtttgtcagtggactacttggtatgtttcaggacagcacattccctgttttgcttcaagctgcagttcatgtgagagaaaagaaggtgcagaaagctgaagaagttcttagccagtatgctgagaagcatcctgagaattctaaaggagtcctcctttcgcttgctcagatcgctgccagtgccaatcattttcagattgctgctgattcattgtctaaaatagttgacatccagcacatgcctgctacagtcgctacactagtagctcttaaagagcgccttggtgactctaatggtgcttcttctgtgcttgattctgctatccagtggtggaagaattccatgactgaggataacaaattagaggtgttcatgcgggaggctgctacatttaagctcaaccatgggcgtgacgaagaggcctgccaattgtatgaggatcttgttaagagctttggaagcgcagaagcgttggcggggctagtagcaacttcagcgcgcaccaaccttgagaaagctgaacagtatgagaagaaactgaaaccattgccaggtctcaagggaattaatgttgagagcctggagaaaacttctggtgcaaggccttttgaggcgcccaaacccatggaacaggacgttactgacgaagtgaagaagcagaaggctaagaagaggaagaggaaacctagatacccgaaaggctttgatccagcaaacccagggccaccaccagatccggagagatggctacccaagagagagcggtcaagttaccgcccaaagaggaaggataagagggctcaggtcagaggtgctcaaggagctgtgtcaagagatggaacttcatctgcgagcgccagttcatcttcgaaagcaaaccaagccaccaaagctccagctgcagccccagaaccaccaaagggttccaacaagtcccggaagaaaaaatcgagatgacgacgaatccaaactatcacagttcacaaaatcaaagataccctagactctgttcgtttagcgttttgactcgcaattttggtgttgattgcattgtgttgccggatttgtcatgcttttacaatcatattttgctggccacatccgagtctgtactgttgccaattctgttaaactgatgcagatctgattgaagttccgccctttacatg</dnaseqindica> |
| External Link(s) |
