Os01g0889400

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Revision as of 05:15, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0889400| Description = Similar to LOB domain protein 6 (ASYMMETRIC LEAVES2)| Version = NM_001051581.1 GI:115441532 GeneID:4324906| Length =...")
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Gene Name

Os01g0889400

Description

Similar to LOB domain protein 6 (ASYMMETRIC LEAVES2)

Version

NM_001051581.1 GI:115441532 GeneID:4324906

Length

3399 bp

Definition

Oryza sativa Japonica Group Os01g0889400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:40432088..40435486

Sequence Coding Region

40433045..40433473,40433577..40433957

Expression

GEO Profiles:Os01g0889400

Genome Context

<gbrowseImage1> name=NC_008394:40432088..40435486 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:40432088..40435486 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcatcgtcagcgtcgtccgtgccggcgccgtcggggtcggtgatcaccatagcgtcggcgtcggcgtcggcggcggcgaacacggcggcgtgcggcacggggtcgccgtgcgcggcgtgcaagttcctccgccgcaagtgccagcccgactgcgtgttcgcgccctacttcccgccggacaacccgcagaagttcgtccacgtgcaccgcgtcttcggcgcgagcaacgtgaccaagctgctgaacgagctgcacccctaccagcgcgaggacgccgtgaactcgctcgcctacgaggccgacatgcgcctccgcgaccccgtctacggctgcgtcgccatcatctccatcctccagcgcaacctccgccagctccagcaggacctcgcccgcgccaagttcgagctctccaagtaccagcaggcggcggctgcggcggcggcggcttccgcgtcgacggggacgaataacgggccgcactcgatggcggagttcatcggcaacgcggtgccgaacggcgcgcagagcttcatcaacgtcgggcactcggcggcgctcgcctccgtcggtggcgcggcggcgtgcttcgggcaagagcagcagttctcggccgtccacatgctgtcgaggagctacgaaggggagcccatcgcgaggctcggcggcaacggcggctacgagttcgggtactcgacgtcgatggccggcggcgggcatatgtccgggctcggcgcgctcggcggcgcgccgttcttgaagtccggcatcgccggcagcgacgagaggcaaggcgccggccagtag</cdnaseq>

Protein Sequence

<aaseq>MASSSASSVPAPSGSVITIASASASAAANTAACGTGSPCAACKF LRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDAVNSLAYEA DMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQQAAAAAAAASASTGTNNG PHSMAEFIGNAVPNGAQSFINVGHSAALASVGGAAACFGQEQQFSAVHMLSRSYEGEP IARLGGNGGYEFGYSTSMAGGGHMSGLGALGGAPFLKSGIAGSDERQGAGQ</aaseq>

Gene Sequence

<dnaseqindica>958..1386#1490..1870#atttcctccccccatcttcgcaacatacagtactcaccatcttttggtggctctctcactctcctctctctctccctagaacagaaacccaaacaaaacggggcgaggtagtagctagggggaaaaagggagaagttttcggtttaaaaggagagaacggcccggccggaagtggtggaaggcgaggaggaggagaacacggtgagatcaggagagaggagataccggccggcggaggcggcggcgcggcggcgcagggatagcgggaaaaaagatcgcgcctaaaaagggtacgtacgcagccatccaccgccggcgtcggatccgataacatctttgctttctttatcctcctctctcctctttgtttttttttctcttccttggttgtgtcttactactaagtctattattatagttcagtcacactctttttcttgctggttctgattgactacaaagctggggctattgatccaagaaaagcacatgccttgacgtttcttcagttagctagctagttagatgaagatattcagatggagtgtctcatacgaacaaactcttgcaatttcactgaggaaccaaagtttcagactttgtgttacagttcggaaaataattcttttttttaacttgttttctcccttttgttttgaatggaaagaaattatgtcgtgattttggtccccttatttgttttcatgttttagatggaaggggcactaatgtatgtgcatttttagtagcttattttcttgtgctttttaggcagtgttctccatgtttagcaatacaataatacagatggttctttctgtttatgccctgctggttttctagcaacttccatagctttatgaggaaaagaaaaaatctatctatggtaatagagaacaatattaaaaagatcggctcttcttaccttttgcactttttctttcccaggcgaggaggatggcgtcatcgtcagcgtcgtccgtgccggcgccgtcggggtcggtgatcaccatagcgtcggcgtcggcgtcggcggcggcgaacacggcggcgtgcggcacggggtcgccgtgcgcggcgtgcaagttcctccgccgcaagtgccagcccgactgcgtgttcgcgccctacttcccgccggacaacccgcagaagttcgtccacgtgcaccgcgtcttcggcgcgagcaacgtgaccaagctgctgaacgagctgcacccctaccagcgcgaggacgccgtgaactcgctcgcctacgaggccgacatgcgcctccgcgaccccgtctacggctgcgtcgccatcatctccatcctccagcgcaacctccgccagctccagcaggacctcgcccgcgccaagttcgagctctccaagtaccagcaggtcagatcaatcacacacacacgccgtagcttgtcttccatcgatcacgccgccacgtacatcggttacatttgtcgttgatgatgtgccgttcttggttcaggcggcggctgcggcggcggcggcttccgcgtcgacggggacgaataacgggccgcactcgatggcggagttcatcggcaacgcggtgccgaacggcgcgcagagcttcatcaacgtcgggcactcggcggcgctcgcctccgtcggtggcgcggcggcgtgcttcgggcaagagcagcagttctcggccgtccacatgctgtcgaggagctacgaaggggagcccatcgcgaggctcggcggcaacggcggctacgagttcgggtactcgacgtcgatggccggcggcgggcatatgtccgggctcggcgcgctcggcggcgcgccgttcttgaagtccggcatcgccggcagcgacgagaggcaaggcgccggccagtagttgggagcgcttgattcggcggttgttgtgttcgtctctgcatgtcaggtgtggcttagcattcttgcagtactgtggcactgtgctcttgtcttcttttagctactgttcttgagataacactattaattagctataagtctgagtgtgtgtgcagctagcgatgcatggagtataatacgatgttaagttgctaaatatggcgcattatgtggtgctaatttcgtgcttaatttgtcgctagccaatcagccatcctataattctcagaaactttgattgcaatccggcctttgtacttaacttaattcctctacacttgtgttcattaagaatccggcttctgttttcgcatcactgtttagctagcttttaatcgggcagtacttgttagagtgtccatgcatgcactacttcacagtactatatatagtgcacgaaccttaattaccatcatgcatatcatggttacctgacaatgtttcgtgtaaaatttcccgatagaattattcgaaggacatccatagtttgacctcatgtgctgtagcatgccatggatgcacagctagcaatgatagcatgtcatgcctggtgtactgcaatgtactacaacttcacttgtgaaaagacgaaaaggttgagctagtttacagaaagtattttactgtaggtttagaaagctcctgccaaaagttgctgaaatcaatacgggtgttttctgtcaagtatcacaaaagcttactagcaaagcctgcagcaattcagttgaactagctctacttatatttcatgtcttgtgtatgcttgcaattttgcttgccaaatgcaatgaaagtgagtgaaaatgccgaggaatattaacatgcgtgcgttgctttgaaacaattttgaatatccatgctaatcaaaccagttaatttgggctggtctgggagcgctcaatttagcacttctagctgagtgtaaaaaggaatcgtctatgaaatcttctagctgagtctaaactatgtatcgcatatatttgtgtctttgtattctcagtgatgatcatgtaaagcttgtgaaatgtgaatagatctctcctggtcttagtcttaaagtaaaggggatttagaaatgtttaggagtactttttctatatggtagggaaaaaagagctctggatatataaatacgtaatttgtaatttaacatgttgattcacttttaccattgttttgcaggttactgactaggaaattaaaattccctaagttctggaaattgaagcggtgaaaaggatcgtaaattaaggctcatgcttaggaggattgctcggtctattttacatgaagatcatgcgtgttcactctgttaatttgccttgtcaatgcttatctttttctttcaatcgatcatccgcaatgtcgaacattttatttgtgccttgatctgttgctgggattgttgctgtactgtgtgcatgcttgtccctgattttagcacttggacggctaccttaattaatactactatattgatactgctcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0889400, RefSeq:Os01g0889400