Os01g0892400

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Revision as of 05:15, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0892400| Description = Pectinacetylesterase family protein| Version = NM_001051595.2 GI:297598095 GeneID:4324922| Length = 3219 bp| Defini...")
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Gene Name

Os01g0892400

Description

Pectinacetylesterase family protein

Version

NM_001051595.2 GI:297598095 GeneID:4324922

Length

3219 bp

Definition

Oryza sativa Japonica Group Os01g0892400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:40556563..40559781

Sequence Coding Region

40558808..40558920,40559066..40559192,40559404..40559486,40559587..40559755

Expression

GEO Profiles:Os01g0892400

Genome Context

<gbrowseImage1> name=NC_008394:40556563..40559781 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:40556563..40559781 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaccagcagcaagctccggtcgccggtgctcccgcgccgtcgacttgcggagcccttccttctgctgctcctgctcctgctcctggccgccgtagcccgcccaacggcggcggcggacgtcgtcgagctgaccctcctcgccggcgctcaggagaagggcgcagtgtgcttggatgggagcccgccggggtaccacctgcagagaggcttcggctccggtgagcacagctggctcgtctttcttgagggaggagcctggtgcaacagcatcgaaagttgttccaggcgcaaaatgggcgtgtatggttcatccaaattcatgaaagcagcagagttcaatggaatactcagcaatgaccaacaactgaattctgatttttataactggaacaaagttgccataaggtattgcgatggggcatcgttttctggtgatgcggaggcccaagataaggtggatatttttaattctaaaagtgatttttga</cdnaseq>

Protein Sequence

<aaseq>MATSSKLRSPVLPRRRLAEPFLLLLLLLLLAAVARPTAAADVVE LTLLAGAQEKGAVCLDGSPPGYHLQRGFGSGEHSWLVFLEGGAWCNSIESCSRRKMGV YGSSKFMKAAEFNGILSNDQQLNSDFYNWNKVAIRYCDGASFSGDAEAQDKVDIFNSK SDF</aaseq>

Gene Sequence

<dnaseqindica>862..974#590..716#296..378#27..195#cccaccacacacgggctgcgcatgacatggcgaccagcagcaagctccggtcgccggtgctcccgcgccgtcgacttgcggagcccttccttctgctgctcctgctcctgctcctggccgccgtagcccgcccaacggcggcggcggacgtcgtcgagctgaccctcctcgccggcgctcaggagaagggcgcaggtatatcttgcctgcacctgcagtgaacttcaggttcttgaatctttgatgggcatcaagttctcctgaactcaagaactgtgttgttgcatgcttgcagtgtgcttggatgggagcccgccggggtaccacctgcagagaggcttcggctccggtgagcacagctggctcgtctttcttgaggtgatcgatcatgcatccatcgattttctctcatcgcagattgctgctttctgttcatggttgcttcaaacatttacatggactcttttgcagcatgagaatgcctgactggatgatgcttaattagtactgtagcattgatcaagtattaatcaacacatgcatcatccaaattcatgactgtttttttttttgttctgcaaatgctcagggaggagcctggtgcaacagcatcgaaagttgttccaggcgcaaaatgggcgtgtatggttcatccaaattcatgaaagcagcagagttcaatggaatactcagcaatgaccaacaactgaattctggtacatgcatttatctcgaaaaaaaattctggtacatgcagataacagatgtgggtccttaattttagtccctatactaatttcctttactaatgctttggataattttgatgtccttttactaatttcaatcattgtcgattagatttttataactggaacaaagttgccataaggtattgcgatggggcatcgttttctggtgatgcggaggcccaagataaggtggatatttttaattctaaaagtgatttttgaagtctctatcttgttctgtccaacactgtaatccctaaaaaataagacctatccgacattattgacaacggtgtaggatgggagcacacttcatttcaggggattgcgcatctgggaagcagttgttgatgagctcatgggaaaaggactcgcaactgctaaacaggttacacgttgtgcattgagtttttaattctgtctgaacaagaatacctggctggtttcatatggacaagaatctttcgtgcttcattctggcactctcatgagtctcatcaagaaccatatcatttttattttcatttttctacatttttcaggccatactttcaggatgctctgctggtggtctggctgcactactgcactgcaatgattttcatgcacgatttccaaaggaggtttcagctaaatgccttcctgatgctggatttttccttgatgtgtaagcctcttgtaattaattagcagtattgtgtactacttgcacttaagtgccagtttctgctccagtgaggatttatctggcgagaggcacatgtggtccgtattcaatggaactgttcatcttcaggtaagctgctgaacacttcaacatatttaaacctagaaaaaacgttatttttcgtaactctaagaagggagctcggcaatttattccaaatgttttggtggtttgttctgttctgtacttatgaatacctcagtgagatctggtcatctggcaatggttgtccttttcttttcacgtgatgttatcatgccagcttgcccgtttgtctcatctgatcgatccgtattcagctttacaatcttactcagttattgtttttgaatttttatcccagaatgttagagaagttttgtcaaaagattgtcttacaaagaaggatccaacagaggtatttacctgtagtttaaatcagctgtattccataaaagatctctccttgttatggtgctaagttcctttactgacgtattgctgttcccagtgcttctttcctgctgagcttgttaagagcatcaccgctcccacgcttattctgaactctgcttatgattcttggcaggtactaattttgttctttatatttgttcccattaatatatatagttctttcctaaaaaacacttaggctgtgtttggcatatctggttctcaaccggaatagtacgcacggaaaacggaatggtccattggcgcgtgattaattaagtattagctttttttttcaaaaatggattaatttgattttttaagcaactttcatatagaaacattttgcaaaaaaacacaccgtttagtagtttgaaaagtgtgcgcgcggaacacgagggagaggggttgggaaccctgagcaaagaacacagccttaactttttccagaggaattcaacaagttaaatcctctcactgttttactatgcttcttatttgtagataaggaatgcccttgctccagatggatcctttcctggacagtcatggtccagttgcaaaactgacattcggaattgcagttccacacaaatccaagtattcaatggttggtttagcttgtccatctgtttggtttcttcggtaactgtcctgtttttaataactcagaagtaaaatttatttctccttgatgtaggattcaggaacaaatttgtcgatgatgtagagattgtcaaagacaaaaaggactggggactgttcattgattcatgcttcacccactgtcaaacgccattcaacatctcatggagctcacaggcctccccagtgctcggtagcaaggtgaggttaaaatcaccggactgtcctaagttcagaaaagaaaatcactgaattgtaagactgtaaaaaatggattgatatgtttttatttacacttgtgtggagcagactgttgccgaggctgttggggattggtatttcgagagaagctatgaagtgaaagagatcgactgcgagtatccttgtaaccccacatgtagcagccagctgcctacatgattttacagtggactgcaccgagattaccagccctccctgaatatttatgcaggcttacttttttttgacggaagtatgcaggcttacttgatgaagcagcagctgcagatcacctttcaccatttgttctatgaacaacttagctaagttttgctgataatcagacgcctgtaataagtcaaacagtggccatctcgagtgaaaaggaaataatttaacatgaacactccacatttattc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0892400, RefSeq:Os01g0892400