Os01g0894600

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Revision as of 05:15, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0894600| Description = RINGv domain containing protein| Version = NM_001051605.1 GI:115441580 GeneID:4324964| Length = 3771 bp| Definition...")
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Gene Name

Os01g0894600

Description

RINGv domain containing protein

Version

NM_001051605.1 GI:115441580 GeneID:4324964

Length

3771 bp

Definition

Oryza sativa Japonica Group Os01g0894600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:40649505..40653275

Sequence Coding Region

40649854..40649859,40650818..40650904,40651332..40651415,40651521..40651668,40651820..40651887
,40652151..40652222,40653067..40653261

Expression

GEO Profiles:Os01g0894600

Genome Context

<gbrowseImage1> name=NC_008394:40649505..40653275 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:40649505..40653275 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcgcaccgagaaggttgccggcgatggctgctccggtggtggtggtggtggtggagaaggtcaggtggaggtggaggtcggggtggggatggggatggacgggaagggaatgatagagtgccggatatgccaggaggaaggggatgagggcgccatggattccccctgcgcctgcactggcacgctcaagttcgcccacaggaaatgcatacaaagatggtgtgacaagaaggggaacatcacatgtgaaatctgcaaccaggtttactctccaaattatgtcctccctccaaccaagtgttgttcagctgaaatggacatggatcttaggcaaagctgggttggacgaattgatccccatgattcgcattttcttgccattgccattgcagagcagcagctgctgcaagctgaatttgatgattgtgtgtcctcaaattcaagtggtgccacatgctgccgaactgttgttttaattttgatgttacttttgcttgtgcgccatgtagttgtgtttgtgagagatgttagcatgctgcaggatgcaacagtgttgtttagcgcaactcttcagttcgcaggattctttcttccatgttatgttatagcccgttcttgttatgcttttcaacaccggaggcgaagacaggtttag</cdnaseq>

Protein Sequence

<aaseq>MARTEKVAGDGCSGGGGGGGEGQVEVEVGVGMGMDGKGMIECRI CQEEGDEGAMDSPCACTGTLKFAHRKCIQRWCDKKGNITCEICNQVYSPNYVLPPTKC CSAEMDMDLRQSWVGRIDPHDSHFLAIAIAEQQLLQAEFDDCVSSNSSGATCCRTVVL ILMLLLLVRHVVVFVRDVSMLQDATVLFSATLQFAGFFLPCYVIARSCYAFQHRRRRQ V</aaseq>

Gene Sequence

<dnaseqindica>3417..3422#2372..2458#1861..1944#1608..1755#1389..1456#1054..1125#15..209#agagagagagagagatggcgcgcaccgagaaggttgccggcgatggctgctccggtggtggtggtggtggtggagaaggtcaggtggaggtggaggtcggggtggggatggggatggacgggaagggaatgatagagtgccggatatgccaggaggaaggggatgagggcgccatggattccccctgcgcctgcactggcacgctcaaggtgacctccccctctctctctatctctctacctcacgcttcttgtttcttctcctgggtgttcttgaaaaactgcgaggactgaggaacacaggtgagtgtttggtgaaatcggagtggaaatccgatgttatttttggttgttgttgtgttcttcagagagatgagcaaatgccaagattttctttctatgttctacccgtttctcatgttgtttccttttgcaatcatgttgctgcaatttctgctttttgctcttctcttttcccctttctttttagcgttatctgttaggtacatgagcacatctttttttttccttctttggttcttgatggaatttgtgtgagaggactcttgccactgtccgtgttcatcgtgtggccaacaattcatctctatttaggctctagcttggaagttagagtgaacaacgaaagttctattgagtaacttcaaatattcagtttcagaagaaaaaaaaagtgacttcaaatgaccttttttcaattctgaagtcagttgaagaatcaacgagttgaatttgttccgttcctttggtctccctcttgttaattggctgaaagtctgaaactatcaaacgagcgccctcagggtcgattgggttctctaaaatatgtttttggtgatgtattgttcacgctgttctttcgcagagatgaacagtcatatgatttttttcccctgttgtaaatgaacagtccatgtttatccaattatcccttcctgattcagtcgtcaaatcaatgttttctcacgctgttttacacctgctgaggagaatgctaatggtatgttggtcaactgctgttggttggatgcagttcgcccacaggaaatgcatacaaagatggtgtgacaagaaggggaacatcacatgtgaaatctgcaaccaggtgggcgtttgttttattctgttacaacctgcaagactatcacacagtaattacatttccatttcaagatgaacatgctccttttctttttcatttttgcgtgaaatgttcctgaggtgcttgatgtaaatatatgtagtttgtgaatgagcaaatacattttcaggccaaatgcattgcagaatgaacaatgtggaggaaaaagagaatgaatattgtcaatggagccttcagatttaatttatttctttaatgctttacaggtttactctccaaattatgtcctccctccaaccaagtgttgttcagctgaaatggacatggatcttaggtactactcatacgattctttatgctttgacaaaattgtgaaaaatcagctatattatgtggtgttttctcccaacttttccatagcaatacggttgttgattctccagtttctggatatcctgtaacaatgactctctgtttataaccaggcaaagctgggttggacgaattgatccccatgattcgcattttcttgccattgccattgcagagcagcagctgctgcaagctgaatttgatgattgtgtgtcctcaaattcaagtggtgccacatgctgccgaactgttgttttaattgtacgtttgagaatcttttctatattaaaccgattcttatattgttatagtgctggaggggatgtacagtacactaacaatgttttttttaacttttgaatgcagttgatgttacttttgcttgtgcgccatgtagttgtgtttgtgagagatgttagcatgctgcaggatgcaacagtgttgtttagcgtaagttcaacagatcttacttctcatttatgctttacttgctcttatgaaatgggatgatccactctctgtttgggcctttggggtgtcccaatgctcaaaataattaattgctgaaaaagccatgttcatcattggttgccaaaggcacaccaaaaacttgaaatggattttctccgttcagaatttagaaatacagagcaaaaccctggttcacattatttttcaaatttgttcaggaatctctctctctctctctctctctctctctctctaaacttgagttaatgaagctcaatttgacctaactgtttttccagcattgtctttttatctctttgtttgttttgttcagtctgtttaggatgtgaagaactgaaatatgtattttctttcatctcgcactaaatctttccttccttttcaggcaactcttcagttcgcaggattctttcttccatgttatgttatagcccgttcttgttatgcttttcaacaccggaggcgaagacaggtatacttcctttcctaccaatgcagatacaagcaagcttgtcaccttggctaagatatagtgagcaactcaaattcagatgacaattttaatatatcatcattttgattctgtgcttatatttcttatgaatagtgggggtgagaagatttcctagtctgaaattttgtaccacattactttgaatggtatgcaacaatttatatctgtataagaaataatctacttcccccgtttcacaatgtaagactttctaacattgcccatattcatttagatgttaatgaatctaggcatatgtatttgtttagattcattaacatctatatatatgtgaagaatgctagaaagtcttacattgtgaaatggagggagtagtagacagtggcaagaacaagtgatctagaacagtaacattgtatataatggacaatatagttaagctgttatatatttctatatattgacatttggcataatgctgcatttagctgtttggtttggtacccatgagagccaaactttgccttaccagcagatttggctaccattcttcgccttctatgccaaagctttcgtatggcagtgttttccttcgcctatctagttcacttttcaagtcaaatttggccacatattgagcaaccagattagctagccaccttgacttggtaaaggccatttggacactgctaaaatctgtaatactgctcagtctagccacttgggttttctccacaacattgtcactgctattctctcgaatacgcaacagagttgcgtatcattgcatatttgcattaatttgagagagggtgtccaaaacatgccaaaacagcaagtacaaacagcacactactgttcttcagtcatctttctgctgtttgcatgtgcacaagtgaaatttatttatccagaatgaaaatgacttaacttatcaggatggttttctctgcaggtttaggggccacctgaacctggctggaagcatttactcaaaacaactcaacaccatcacagagagacgagaggaaaagcttgtgaagaagtaactcaaactccctttgcttggagcctctgcgaaagatttggcttaatttctcccccaacaagatgtagttgccgatttagaccatgggccctcgtgaagctcaactgtacataggagagcgacccacccccttcggcaaaacatttatgttttcgaaattgaattttagagaaaagaacaagtggatttaaaaaatttcagtgtctttccagctgttaattctttctgaagagaagtggtcgatatcgaaatattgagcatg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0894600, RefSeq:Os01g0894600