Os01g0895600

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Revision as of 05:15, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0895600| Description = Similar to Calreticulin 3 (Fragment)| Version = NM_001185763.1 GI:297720660 GeneID:9267167| Length = 4288 bp| Defin...")
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Gene Name

Os01g0895600

Description

Similar to Calreticulin 3 (Fragment)

Version

NM_001185763.1 GI:297720660 GeneID:9267167

Length

4288 bp

Definition

Oryza sativa Japonica Group Os01g0895600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:40686312..40690599

Sequence Coding Region

40686678..40686689,40686771..40686803,40687325..40687417,40687497..40687553,40687636..40687731
,40687825..40687892,40688017..40688197

Expression

GEO Profiles:Os01g0895600

Genome Context

<gbrowseImage1> name=NC_008394:40686312..40690599 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:40686312..40690599 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>taccaaatccagcatacaagggaccatggaagcgcaaggtttgttttttttgtctttggcaaccaatccttcttggtgcactatcttttaagagttcatattcatacattcttttgtgtacagaaaatcaagaatcctaactacaagggtaaatggaagatcccatggattgataatccagagtttgaggatgatccagacctatatgtgctgaaacccttgaaatatattggaattgaggtttggcaggtaaaggctggttcggtttttgacaacatcctcatttgtgacgatccggaatatgcaagaaaagctgctgaggaaacatggggtgcaaacagggaggccgaaaaagaggcttttgaagaagctgagaaggagaggaaagctagagaggataaggaagctgaacgagcaagggaggaaggagagcgacggaggagagagaggggtgatcggcaccgtggcagggattacaaggacagatacaaaagacgtcatagggatcactgggatgatgactaccatgatgagctttga</cdnaseq>

Protein Sequence

<aaseq>YQIQHTRDHGSARFVFFVFGNQSFLVHYLLRVHIHTFFCVQKIK NPNYKGKWKIPWIDNPEFEDDPDLYVLKPLKYIGIEVWQVKAGSVFDNILICDDPEYA RKAAEETWGANREAEKEAFEEAEKERKAREDKEAERAREEGERRRRERGDRHRGRDYK DRYKRRHRDHWDDDYHDEL</aaseq>

Gene Sequence

<dnaseqindica>3911..3922#3797..3829#3183..3275#3047..3103#2869..2964#2708..2775#2403..2583#gcagctttaccgagccaccggagtagcctcgtcttctccggcgagccaccggcgatgggaagtcgcagcggcggccgccaccgactcttcctccgattcatcgccctctggtcgctgctcctcatcgccgccggggaggtcatcttcgaggagcgcttcgaaggtaataatccggcgtttcccaatttagtcctaattgcttaccagttttgggggagctcgcttcgcatgctccctagcttgagcttatagttatagctgctgctacttctgtgctggtgcttgattcgaattggcgaggctcaccatgctggattcgctgctcccggtttccattttgggcgcggctgcttttccatgtcgccccctgggcttgtgcgagtattgtatccaaggactttatggttactgtccctgtcaatttcgagatatttaaccatttgcatgtggcaattaactttttgccactggacccacatgtggcaaatagttatttgccaaatctaaaagtggcaaatagttaaaagccccgtcaatttcagcttcacctgttaatacttaagtatggatggggatggaggttgggttgttcgttcaaaaaatgagagcttctcttcaaggggctaatcacaggttgatgtagttcaggtccgctagtgaaattagtggagtattgagcattgtatggtgtcattgttaactgttgtttatctaattttgtgaccgtgaagagcctgagtgtgttattgaacggaaaatagttggcatgagttggtttgaatgagtaaggtgtgatgctttgtccaatttatgaacttccaatgaataggtgccatgctgcttattttcctccttgttttggttgtctgagtgtatgtcatgactcacgtgattgcatgtttcaaatattcagatggttgggagtcccgctgggtgaagtctgattggaaaaggagcgaagggaaagctggaacgttcaaacacacggcaggaagatattctggagatcctgatgacaaaggtccgctttttactgtcattgtcgttctatttcaattgatgacattgatggctttattgtgaaaacgtttattctgtatgcttatctttcttccatacagtgtttgatccttgtgttctttgtggcattcaggtatacagacaacgttggacgccaggcattttgctatatcggccaagatccccgaattcagtaacaagggccgtacattggtactccagtattccataaagtttgagcaggatattgaatgtggtggtggatatattaaacttatgtctggttatgtcaaccagaagaaatttagtggagacactccatacaggtatgttcttgcttacaggatttccaattcctacaaatatctattgttcgtgtggtagtgtctcaagctatattatataattccagatcatggtctgtgactggattatcaaaggactaatccatgtatacagggtttatttgctctcctttttctagtctgctgctaaacgatgcctgctaactttattttctcccctttatgcagcttaatgtttgggccagatatatgcggaactcaaacgaagaagctccatcttatactttcttatcaagggcagaactaccctatcaagaaagatctgcaatgtgaaacagacaagttgacgcatgtttacacattcatactaaggcctgatgcgtcctatagcatactagttgataaccgtgaaagagaatcagggagcatgtacactgactgggacatcctccctcctcgcaagattaaggatgttcatgccaaaaaggtaactttttatttcaataactggagctgtatgaagactagaaattacgatgtcataactaacatatatgccttcttttgcagcctaaggattgggatgacagagaatatattgaggatccagatgcagttaaaccagaggtttgtgttgccaaaactccaccccttacatgttatactgtgcatatgtgttgtaacatttcatttgccttggtcagggctatgattctattccaaaggagattcctgatccaaaagacaaaaaggtaataagctattagattaatcaaaacctaacgtatcaaccatttaaaagcacccaaagactggccaatttaaccacatgtctagctctacacctctacctactgccatgagcccatggcatctatttaatttatagtaactgcaacataagattctgacagcaatgcaactgattctagtataacttcctagtatgcattttcagtgaagttctctatataactgaagtactgaacgcacatgataactaatatgcatcttttgttctaaatcagcctgacacgtgggatgatgatgatgatggcatatggaagcctagaatgataccaaatccagcatacaagggaccatggaagcgcaaggtttgttttttttgtctttggcaaccaatccttcttggtgcactatcttttaagagttcatattcatacattcttttgtgtacagaaaatcaagaatcctaactacaagggtaaatggaagatcccatggattgataatccaggtatgcaaatagtgctactaactttatgtgctacatttagtgtgatatgacactcagcacctgattttgaactgggcctcttgtttgaacaccacttaagctgtgtgtaattccaattttgcagagtttgaggatgatccagacctatatgtgctgaaacccttgaaatatattggaattgaggtttggcaggtaacatttatagtggtctgcttgcttcatcaaatcctagtttggtctgaatgatgtatatgcgacatagactcacgctttattcatatgcaggtaaaggctggttcggtttttgacaacatcctcatttgtgacgatccggaatatgcaagaaaagctgctgaggaaacatggggtgcaaacagggaggtaacatcacataaatatttacagaattgttgtctgctattcatatctgctaggcacaatcttagttttgtctacattgcaggccgaaaaagaggcttttgaagaagctgagaaggagaggaaagctagagaggataaggtcaaaatcttagttttgagcacttgatgtgggagcatgactggaattagagaagctaactgtaactacttttgtacaggaagctgaacgagcaagggaggaaggagagcgacggaggagagagaggggtgatcggcaccgtggcagggattacaaggacagatacaaaagagtatatttcttctactgctatataacaaacttgcatcttgctttcttcatgaactagtgaagccaccattgagctattagaagtacttagtactgagtaccggtcactgagtcataacctttgattcccctaaaaaaacgcctactgatgcaagattatcatgtggtcccttagtttcttctatactattgtccttcacacgttcctacataagcaaacaaattctctctaatatctgatttttttttccggatctaatatctgattagatgtaaggtatttttgggaggctgtggtgaagtgtgttgtgacttgtgtagtgccgtaagttcatgatgtagtgcaagaaatatcaaatatgcagagtggataatgatttttttagcgaaaagggcatgagccttgcttattgcattaaaggatcaaacaagagtttaggaaagcaaagatagaggtagaaacaagtgaatgctatgatttactaggttactaacatccctttgctcttctctatgtttcagcgtcatagggatcactgggatgatgactaccatgtaagttgcaaaaaaccttcattccatcgatatcgaattagataatagcgggtgacttacatagtaatgctccatttgcaggatgagctttgaaatcacggaaaaatgctttcttcctaggagaagctggaatttgcatggtcattgcttataattgttaccaataaatgatctgggaggccagaatagccgcaagtgttccttgctgcgtgtgctgaaaatttgaatatccggattggaatgaaatgaacaaaagcctgaagatcattccttttggacagcagggcatacgattctacttaccagcaacacgttgtttttagttgtgaattggtgaaatgttgacgttgtaacgttgcgacttgcgaatataatgtgcacggggtgatgttctgccactttttgaacactgaacattttactgcatatcaagctagcaactgcaagcagcttcctgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0895600, RefSeq:Os01g0895600