Os01g0896620

From RiceWiki
Revision as of 05:16, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0896620| Description = Eukaryotic ribosomal protein L5 family protein| Version = NM_001185764.1 GI:297720662 GeneID:9271934| Length = 2814 ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0896620

Description

Eukaryotic ribosomal protein L5 family protein

Version

NM_001185764.1 GI:297720662 GeneID:9271934

Length

2814 bp

Definition

Oryza sativa Japonica Group Os01g0896620, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:40724163..40726976

Sequence Coding Region

40724225..40724227,40724949..40725021,40725119..40725210,40725320..40725446,40725538..40725629

Expression

GEO Profiles:Os01g0896620

Genome Context

<gbrowseImage1> name=NC_008394:40724163..40726976 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:40724163..40726976 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggagggtttgtcaagacccagaagacccatgcctacttcaagcgattccaagtcaagttcaagagacggaggcagggcaagactgactacagggccaggattaggctcaccaaccaagataagaacaagtacaacacaccgaagtaccgcttcgttgtgagatttacaaacaaagatatcacagctcaaattgtctatgctaccattgcgggtgatatcgtgatggctgctgcctactcccatgagctgcctcgttatggtcttgaagttggtctcaccaactatgcggcagcttactgcactggcttgcttctggctcgtcgtgtgctcacgctccgtggtttggaccaggagtacgagggcaatgttgaggtacaaatataa</cdnaseq>

Protein Sequence

<aaseq>MGGFVKTQKTHAYFKRFQVKFKRRRQGKTDYRARIRLTNQDKNK YNTPKYRFVVRFTNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCT GLLLARRVLTLRGLDQEYEGNVEVQI</aaseq>

Gene Sequence

<dnaseqindica>63..65#787..859#957..1048#1158..1284#1376..1467#cttctcctcgctcctccccctccgccgccgccgcagcggagcagcaacagcaggcgagcgacatggtaagatcctctgctccatcctctctacctcgttacggcccgtgctcgaatcggtcgctgcgtgctgtgctgtgctgtttcgttctcgattcgccgcgttgcggtttggttcgtgaaggttttatgtggtggtagctccgtgggtgattggtagagcggctgcgaggttttttgcgtttgtggcgatggatatgatgctgggttcttgggatccatttcgatccggtagggatctatggcgtcatatagatttcttgcttaaacgacgatgtgttgtgccatctcggtcggcgtgcttcccatttgatggttgctagcatctcttctctttgcggtaacattctgcagtagttcgtgacatccatattgattgttttgttcagtagatccacttaggtgtattgccacatccctgtagtggaagtatactagatgtcacaaacactatctagttgctacaaccagcacaaatttcacatgcttgtctagttctatcagttatactcctacgcatcagagatttatgtgttttggatattggattttagatggttcagtcgtgtagttgctgcagtacatttgctatcctaactgactgcatgatgataaaactgcagtgttttgatatgcgtttaggaagttctcaaatttaagtctagttcacatgtttgcttgccttcagtttttatgctgttgtattaatgtgataatgtctctccagggagggtttgtcaagacccagaagacccatgcctacttcaagcgattccaagtcaagttcaagagacggaggcgtaagttcaatataatcctttcatgtggctcatgcattctgtgcttgtaatatagctaggttttgatgtacttaatctcatttgttattgtttgcagagggcaagactgactacagggccaggattaggctcaccaaccaagataagaacaagtacaacacaccgaagtaccgcttcgttgtgagatttgtatccttttagttctttttatcatggtatttatgcatttcctcgtaaattctggttgttataccatatctttattattatcatactgtatgccttaatagtacattagacaaacaaagatatcacagctcaaattgtctatgctaccattgcgggtgatatcgtgatggctgctgcctactcccatgagctgcctcgttatggtcttgaagttggtctcaccaactatgcggcaggtagtttcctcagctgaatgaatatgcagaatgctggtttgtcttgctgtatgcatacaatttaattcctctgttttgatgcattgtgtagcttactgcactggcttgcttctggctcgtcgtgtgctcacgctccgtggtttggaccaggagtacgagggcaatgttgaggtacaaatataatccttataatttttttactctatatgctcatgctggtcttgatcttgatatgtatgattcctttggtcaggccactggggaggactactatgttgaaccagctgatgaaaggaggcctttccgtgctctcttggatgttggcctcattaggacaaccactggaaaccgtgtctttggtgccctcaaggtgtgttgtgctttgatctcaactgttggctgctgtaataatagttgatttgtcacttgaacatcaaattcatcagctcttttagaaacacaaccgtcaatataacctttggattgttgatctgtattagtagctcatgtggatatacttctcttcttctgcagggagctttggatggtggtcttgacattcctcacagtgacaagaggtttgctgggttcaagaaggacgagaagcagcttgattctgatattcaccgcaagtacatctacggtgggcacgtggctgactacatgagggtgagctggcactattagatcaattgttcgtgctgtgggttgtattaggaattatgtagctgccttgatgtttataacgttgactaaagcattatataaagtttggattatttgttactgtttagctcagtctgctttattttgattgtcatcaggataaattttcttcttatgtacttgttgcagtctatggctgaggaggaacctgagaaattccaagcccactttagtgagtacctcaagaagggaattgacgctgatggcatggaatcactgtacaagaaggtccatgctgccatccgcgccgatcctaccatggccaaatcgaccaagaaggaaccggctacccacaagaggtatattaagctggctgatgattttcgtaaagattatttgtgatgtccatgtatgatgtaactaacttgccatctctttgctgcagatacaacctcaagaagctgacctacgagcagaggaaggccagtctcgtcgaaagattgaatgctctcaactcctccgctggtgctgatgatgatgacgaggaagaggatgacgagtgagagagtagccttatcacagtagtttcatcttatgctgccaaacaaactccatatggcatttaagtttacctgtagtcttgcaatttgcaacaggcatttttgtttatgttctgcactctgctcaaagaacctatttctttcggtttttgattctcaaccttgagctatcagttatcttatttatgtgagaagctgccgtttggatattgatataattgtgttctgcctgcctcttcacttgtctttgttttatgttattcctttttagcaatgggcagtcaaatctgctggtcttgcctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0896620, RefSeq:Os01g0896620