Os01g0896800

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Revision as of 05:16, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0896800| Description = Eukaryotic ribosomal protein L5 family protein| Version = NM_001051618.1 GI:115441606 GeneID:4325100| Length = 2723 ...")
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Gene Name

Os01g0896800

Description

Eukaryotic ribosomal protein L5 family protein

Version

NM_001051618.1 GI:115441606 GeneID:4325100

Length

2723 bp

Definition

Oryza sativa Japonica Group Os01g0896800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:40729500..40732222

Sequence Coding Region

40729587..40729589,40730273..40730345,40730429..40730520,40730630..40730756,40730848..40730927
,40731016..40731132,40731299..40731433,40731634..40731803,40731888..40732005

Expression

GEO Profiles:Os01g0896800

Genome Context

<gbrowseImage1> name=NC_008394:40729500..40732222 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:40729500..40732222 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggagggtttgtcaagacccagaagaccaatgcctaccacaagcgtttccaagtcaagttcaagagacggaggcagggcaagactgactacagggccaggattaggctcaccaaccaagataagaacaagtacaacacaccgaagtaccgcttcgttgtgagatttacaaacaaagatatcacagctcaaattgtctatgctaccattgctggtgatatcgtgatggctgctgcctactcccatgagctgcctcgctatggtcttgaagttggtctcaccaactatgcggcagcttattgcactggcttgcttttggctcgccgtgtgctcaagctccgtggtttggaccaggagtacgagggcaatattgaggccactggggaggactactatgttgaaccagctgatgaaaggcggcctttccgtgctctcttggatgttggcctcattaggacaaccactggaaaccgtgtctttggtgccctcaagggagctttggatggtggtcttgacattcctcacagtgacaagaggtttgctgggttcaagaaggacgagaagcagcttgattctgatattcaccgcaagtacatctacggtgggcacgtggctgactacatgaggtctatggcggaggaggaacctgagaaattccaagcccacttcagtgagtacctcaagaagggaattgatgctgatggcatggaagcactgtacaagaaggtccatgctgccatccgtgctgatcctaccatggccaaatcaaccaagaaggaaccggcgacccacaagagatacaacctcaagaagctaacctacgaacagaggaaggccagtcttgtcgaaagattgaatgctctcaactcctctgctggtgctgatgatgatgacgaggaagaggatgatgagtga</cdnaseq>

Protein Sequence

<aaseq>MGGFVKTQKTNAYHKRFQVKFKRRRQGKTDYRARIRLTNQDKNK YNTPKYRFVVRFTNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCT GLLLARRVLKLRGLDQEYEGNIEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVF GALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEK FQAHFSEYLKKGIDADGMEALYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQ RKASLVERLNALNSSAGADDDDEEEDDE</aaseq>

Gene Sequence

<dnaseqindica>88..90#774..846#930..1021#1131..1257#1349..1428#1517..1633#1800..1934#2135..2304#2389..2506#aactattccttctcccacctctcccctctcctcgctcctccacgcgccgccgccgccgcagcggagcagccacagcaggcgagcgacatggtaagatcctcacactccatcctctcaacctccttgcagccctgctagaatcggtcgctgcgtgctgtgctgtttcgttcttgattcgctgcgtcgcggtttggttcatgggtgtccttgattagctcggtgggtgattggtagtgcggctgcgaggttatttgcgtttgtggcgatggatatgatgctcggttctcgggatccatttcgatccggtagggatctatggtgtcatgtagatttcttgcttaaacgataatgtattttggcatttcggtcgtcgtgcttcccatttgatgttgctagcatctcttcttttcgcggttgcattttgcagtagttcgtgccatccatcttgattgttttgttcagtagagccacttaggtgggttgccacatcccagtagtggtagtatagtagttgtcacaaacactatctattgctacaaccagcacaaatttcatatgcttgtctagctctatcagtttttctggatattggattttagatggttccgttgtctagttgcaccaatacatttgctatcctaactgactgcttgataataaaattgcagtgtttcgatatgcgtttaggaagttctcaaatttaagtctatttcacatgtttgcttgccttcagtttttatgctgtttgtattaatatgataatgtctctccagggagggtttgtcaagacccagaagaccaatgcctaccacaagcgtttccaagtcaagttcaagagacggaggcgtaagtcaagttcaagagaccgaggcgtttccaagtcaagtcaaggttttgacgtacttaatctcatttgtcattgtttgcagagggcaagactgactacagggccaggattaggctcaccaaccaagataagaacaagtacaacacaccgaagtaccgcttcgttgtgagatttgtatcctttttgttctttgtatcatgatatttatgcatttcctcgtaaattctggttattatactatatatttgttattatcatactgtatgccttaatagtacattagacaaacaaagatatcacagctcaaattgtctatgctaccattgctggtgatatcgtgatggctgctgcctactcccatgagctgcctcgctatggtcttgaagttggtctcaccaactatgcggcaggtagtttcctcagttgaatgaatacgcagaatgctggtttgtgttgctgtatgaatgcaatttaattcctctgttttgatgcattgtgtagcttattgcactggcttgcttttggctcgccgtgtgctcaagctccgtggtttggaccaggagtacgagggcaatattgaggtacaaatacaatccttataaattttttactctatatgctcatgctcatgctgattttgatcttgatatgtatgattcctttggttaggccactggggaggactactatgttgaaccagctgatgaaaggcggcctttccgtgctctcttggatgttggcctcattaggacaaccactggaaaccgtgtctttggtgccctcaaggtgtgttgtgctttgatcgcaactgttggctgctgtaataatagttgatttatcacttgaacatcaaattcctcagctcttttagaaacacaaccgttacgataacctttggattgttgatctgtattagtagctcatgtggatatacttctcttttcttctgcagggagctttggatggtggtcttgacattcctcacagtgacaagaggtttgctgggttcaagaaggacgagaagcagcttgattctgatattcaccgcaagtacatctacggtgggcacgtggctgactacatgagggtgagctggcactattagatcaattgttcgtgctattttgacattgctgtgtgttgtattaggagttatgtagctgccttgatgcttgtaatattgactaaaacattataagcaggctggaaaatttgttactgtttagctcagtctgcttgatttttattctcatcagtttaaaatttctacttatgtacttcttgcagtctatggcggaggaggaacctgagaaattccaagcccacttcagtgagtacctcaagaagggaattgatgctgatggcatggaagcactgtacaagaaggtccatgctgccatccgtgctgatcctaccatggccaaatcaaccaagaaggaaccggcgacccacaagaggtacatgaatctggctgatgatttctggaaagattatttgtgatgtccatgtatgattgtaactaacttgcatctttgtctcagatacaacctcaagaagctaacctacgaacagaggaaggccagtcttgtcgaaagattgaatgctctcaactcctctgctggtgctgatgatgatgacgaggaagaggatgatgagtgaaagagtttagccttatcacagtagttccatctttatgctgccaaacaaactccatatggcatttaagttcacctgtatagtcttgcaagttgcaacaggcatttttgtttatgttctgaactccgctcaaagaacctatttctttcggtttttggttctcaacctggagctatcggttatcttatttatgtgagaagctgccgtttggatattgatc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0896800, RefSeq:Os01g0896800