Os01g0897100

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Revision as of 05:16, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0897100| Description = Conserved hypothetical protein| Version = NM_001051620.1 GI:115441610 GeneID:4325102| Length = 3826 bp| Definition ...")
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Gene Name

Os01g0897100

Description

Conserved hypothetical protein

Version

NM_001051620.1 GI:115441610 GeneID:4325102

Length

3826 bp

Definition

Oryza sativa Japonica Group Os01g0897100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:40742510..40746335

Sequence Coding Region

40743298..40743640,40744414..40745531,40745637..40745705

Expression

GEO Profiles:Os01g0897100

Genome Context

<gbrowseImage1> name=NC_008394:40742510..40746335 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:40742510..40746335 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggttcaactcttttttcaagggaccacagatggtggtagtgttgatacagatgctgtaaaagcaaggcgatctcttcttggcaaggtggagcctataatcaggtcggttataaagtctggaggtgggtatgaggctcggatgtggctctgcagtacggtctcatccattcatttgctcgacccatatggccagcgggacctgtttctcaatctcttggggatgaaaaattccaaacgggatgtcgctgcccgcttgctgcggatgatttttgacaaaaagcccaaaaaagcaggttctattatagcaaagaaatgccagatgctagaggacttcttccaagggaatccaaagcagataatgcagtggtttggtcactttgcggttactggtgaattgacacataagaagggtgctagggcactttctcaatttgcatttgtgaatcgtgatatttgttgggaagagcttgagtggaaaggcaagcatgggcagtctcctgctgttgttgctactaagccccattattttcgtgatctcgatgttctgcggactgtggaaaatttcctggagtatgtcccagacttctggtcttctgaagagcttgctgattccgtcaaagacggtgaaatactgcaaattgacacagaatattttgtagatcaattcgtttacttgatgtatgaggagaattccagagatgcatggcagttagttgatgaatttttgatggacgagcagttttcttctctttctcaacatcttcttattcatttagatgaacaaaggcttcttaatttcttgagagctttggggaagttgatcaagctgaattcacagtgcaaggaaatggtgttcccatgctgttggcttgaggttcttttgtcagcacacagtgatcacatatctcttgatgaacttgtgctattgaactgtgtcatttctaagggcagacaactttggcgcctcatgaatgatgaagaacaagaggaagaacaaggacagatgcaagagcttctgaagagcactaatcaattgactgatgctgatcattttgctctcatgaagggatttgtggatacagaacttccggacgcacttaagtggataggcatccagtcctggctagttttctgtgaattgtcaaaagggtgcaaatcagctgattcttgtgagcatctgttcacttgtaacagaatagaatttcgcaaggctgatgattacccattggtccaaaatgatgggaactcaattgcactagacagtgatgatgaggatctcataagaggtagccataaaaggagaaagagagatcggaagagaaagcgacggagatatgattctgacgaggacgatcttgatcagctgcttgaacttggtacctccaataggaggggcattgaatcgcaccatggatgttggtatctttcaactgatggcttttctgcttcatgggacattgcagacataccagatcacctttcctctcattatctaaaaacatggctaaagtttgcttgctttagatga</cdnaseq>

Protein Sequence

<aaseq>MVQLFFQGTTDGGSVDTDAVKARRSLLGKVEPIIRSVIKSGGGY EARMWLCSTVSSIHLLDPYGQRDLFLNLLGMKNSKRDVAARLLRMIFDKKPKKAGSII AKKCQMLEDFFQGNPKQIMQWFGHFAVTGELTHKKGARALSQFAFVNRDICWEELEWK GKHGQSPAVVATKPHYFRDLDVLRTVENFLEYVPDFWSSEELADSVKDGEILQIDTEY FVDQFVYLMYEENSRDAWQLVDEFLMDEQFSSLSQHLLIHLDEQRLLNFLRALGKLIK LNSQCKEMVFPCCWLEVLLSAHSDHISLDELVLLNCVISKGRQLWRLMNDEEQEEEQG QMQELLKSTNQLTDADHFALMKGFVDTELPDALKWIGIQSWLVFCELSKGCKSADSCE HLFTCNRIEFRKADDYPLVQNDGNSIALDSDDEDLIRGSHKRRKRDRKRKRRRYDSDE DDLDQLLELGTSNRRGIESHHGCWYLSTDGFSASWDIADIPDHLSSHYLKTWLKFACF R</aaseq>

Gene Sequence

<dnaseqindica>789..1131#1905..3022#3128..3196#tttcaccgtcaccgcctcattctttccgatcctccgcgccgcgctgctcggtgctccgccgccgccgccgccgccgccgctcaccgcaacgagcatactaccgcctctcttcctcgtcgtgccctagtgggaactgggaacccccgccgcgcccagctggtaagcgtcgcgctcctaatctgttcatcaaattggtcgagaatttggtcgcaatcacggagtcctcttggagctggagagagatcgtggtgctcgggggagttgtgaggctttcctctcctcgcctgctcgatccgccgccgccaccgccgccgccttcctcctcacgccacatcctcccgccgtcctcgggcagggggcctttccttgtcgcccccttcctctttgctgctcttccgcctcgcctcccatctccgcctcgcctcctcctccatgacttggtcggcctggaggtgttcgtgaatcgtgagagacgctaacctgccccgctgccgtagaggtctcagttggtacctgttgtgcttcggtttctatttcctagccaggaacttttaaattttgcatttcagtttagggtttccgattaaaattacctatgacgtttcaacagataaataggtgttgggatcaaatctcggctaagttaaatccatgttgaattttacttggcaatctaaggttttagtgttacctatatgcgttacttcaatgaggactggagaatgtgaaacattgttattgcaatttgcaactttcaatttcaggaggtagaaaatctctcttggaagatggttcaactcttttttcaagggaccacagatggtggtagtgttgatacagatgctgtaaaagcaaggcgatctcttcttggcaaggtggagcctataatcaggtcggttataaagtctggaggtgggtatgaggctcggatgtggctctgcagtacggtctcatccattcatttgctcgacccatatggccagcgggacctgtttctcaatctcttggggatgaaaaattccaaacgggatgtcgctgcccgcttgctgcggatgatttttgacaaaaagcccaaaaaagcaggttctattatagcaaagaaatgccagatgctagaggacttcttccaaggtaaggaattacactaagaactcgatgctctgaatttttctactgctgctcacatatatctgttttatattcctttttcttgctgcgactcactgttcagtatccagaacatactctagttgagatatatctgtttagggatttacctagaaatatgacatttgttcctctattacagttgcataaaaatattaagcctgtttggcttgttggcaatacaagatatggaattatgcataattgcgtacactcagtttgaattacttcttcacataatgggtagtaactagtggcccgcccctcagtccctcactcatgcaagtagtttaacacattcttagattaatacaaatgtgccatacactagaagaagatgaaatggtgtttccactacagtaacatcatgctttgttcctgcctttttctatttgtgttttaggtatagaaccattttttggctgtgatctaggtctcaacttggactgactgacatgagttggctctcgcatacttgcatatatgattgtatgatcttatttagtgtaatttgtcagagagattgtagggtgagtgcctttgtgtactgaaaacatgctaaacatccatgtaactttttgtgctgtgcagctgtagtaagccctgaatcaaatatacaaagcatattgagttttctgtgtctctgttgcaacccagaaagactggtttgatactggcaggagcatgagcatctattctttctgacatagtgacattccatttattatgttctacagggaatccaaagcagataatgcagtggtttggtcactttgcggttactggtgaattgacacataagaagggtgctagggcactttctcaatttgcatttgtgaatcgtgatatttgttgggaagagcttgagtggaaaggcaagcatgggcagtctcctgctgttgttgctactaagccccattattttcgtgatctcgatgttctgcggactgtggaaaatttcctggagtatgtcccagacttctggtcttctgaagagcttgctgattccgtcaaagacggtgaaatactgcaaattgacacagaatattttgtagatcaattcgtttacttgatgtatgaggagaattccagagatgcatggcagttagttgatgaatttttgatggacgagcagttttcttctctttctcaacatcttcttattcatttagatgaacaaaggcttcttaatttcttgagagctttggggaagttgatcaagctgaattcacagtgcaaggaaatggtgttcccatgctgttggcttgaggttcttttgtcagcacacagtgatcacatatctcttgatgaacttgtgctattgaactgtgtcatttctaagggcagacaactttggcgcctcatgaatgatgaagaacaagaggaagaacaaggacagatgcaagagcttctgaagagcactaatcaattgactgatgctgatcattttgctctcatgaagggatttgtggatacagaacttccggacgcacttaagtggataggcatccagtcctggctagttttctgtgaattgtcaaaagggtgcaaatcagctgattcttgtgagcatctgttcacttgtaacagaatagaatttcgcaaggctgatgattacccattggtccaaaatgatgggaactcaattgcactagacagtgatgatgaggatctcataagaggtagccataaaaggagaaagagagatcggaagagaaagcgacggagatatgattctgacgaggacgatcttgatcagctgcttgaacttggtacctccaataggaggggcattgaatcgcaccatggatgttggtatctttcaactgatggcttttctgcttcatgggacattgtatgctatcttcttttttattaacacttttcattcagtgaagtcactaaattaacaccgtctattttattcggtatacttatgattgtcttgctactactgcaggcagacataccagatcacctttcctctcattatctaaaaacatggctaaagtttgcttgctttagatgatcctcacaacatgagttcaacaacccaccagttttcgggtgaattcatggggtcatggagatgtatgtacaggcttcgctctgttttccaacctcagatgcgcatctttaggccatgaattctgagagtaagttagtcacttcctgtaccccccacttgttaatcctttatttctttagtgaagttccatagtttgataagtacatgtaatatatacttggttttgctttttgttttctattggcagtctctccacattcatctttatcattttaataaccgtgaatcaataatgcttcaacattattttgcttttattggaagttttgatgacacttgtcatattttgcagattcatgcatttctggacgtgctagccgctgctacatgaccaaagtaccgtgctggttgattccattgaaaaattacaggctaggacactgaattggcaggtttcactggaaagcggaaagtgaaaatacatctgaatgttgtaagacttgactagagctgttaaaagttgtatgccccggtctgcgggccttaccgccttatgctgtagttcgcagctggtgacttaagaattttgatcgacctttttctacatgaaaattggttgctgtttgtgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0897100, RefSeq:Os01g0897100