Os01g0897200

From RiceWiki
Revision as of 05:16, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0897200| Description = Similar to Ribonuclease 2 precursor (EC 3.1.27.1)| Version = NM_001051621.1 GI:115441612 GeneID:4325103| Length = 28...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0897200

Description

Similar to Ribonuclease 2 precursor (EC 3.1.27.1)

Version

NM_001051621.1 GI:115441612 GeneID:4325103

Length

2820 bp

Definition

Oryza sativa Japonica Group Os01g0897200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:40746829..40749648

Sequence Coding Region

40747133..40747203,40747294..40747390,40747950..40748111,40748324..40748419,40748713..40748814
,40748961..40749034,40749175..40749203,40749354..40749577

Expression

GEO Profiles:Os01g0897200

Genome Context

<gbrowseImage1> name=NC_008394:40746829..40749648 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:40746829..40749648 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacggcgaggaaggcgccgcgcatggtggcgatctgggcggtggtggtggtggtggtcgccgccgatctgttcggagcggcggtcgcgcggtcggcgtcggcgcgtcacgcggtggggaagaagcagcgggagttcgactacttcgcgctggcgctgcagtggcctggcaccatctgcgcctcaacccgccactgctgcgccatcaacggatgctgccgctcggagccgctccagacgttcacgatccatgggctgtggccggactacgacgacgggacctggccggcgtgctgccgccacaccagcttcgacatggacaagatattgcccctgaagccgacgcttgagaagtactggccgtccctctactgctcatcctcttccacttgcttcagtggcaaggggcccttctgggctcatgagtcagagaaacatggaacatgctcatccccggtagttaaggatgaattagagtatttcaccactgctcttgacctctacttcaaatacaacgtcacggaaatgttggcaagtggtggtatccatgtttcaaatggtaaacaatatgcgctaactgatgtcattgatgccatcaaatgtgcttttggggcctcaccgcaaattgtttgcaagaagggctcagttgaagaactgaggttatgctttgacaaagatttgaagccccttgattgccttactactactgctaccaatgaaaacgtatcgaagaagaagtattgccctcgatacatcaccctgccaacatatgaccccatagtacatgctaattctactcgggagatcataacagtcgaaagtgaggtctatggatatctttacacatcctaa</cdnaseq>

Protein Sequence

<aaseq>MATARKAPRMVAIWAVVVVVVAADLFGAAVARSASARHAVGKKQ REFDYFALALQWPGTICASTRHCCAINGCCRSEPLQTFTIHGLWPDYDDGTWPACCRH TSFDMDKILPLKPTLEKYWPSLYCSSSSTCFSGKGPFWAHESEKHGTCSSPVVKDELE YFTTALDLYFKYNVTEMLASGGIHVSNGKQYALTDVIDAIKCAFGASPQIVCKKGSVE ELRLCFDKDLKPLDCLTTTATNENVSKKKYCPRYITLPTYDPIVHANSTREIITVESE VYGYLYTS</aaseq>

Gene Sequence

<dnaseqindica>2446..2516#2259..2355#1538..1699#1230..1325#835..936#615..688#446..474#72..295#gaccgtacaaccaagccgcagagaagaggaaggcggaatcagtcgagggcgaggcggcggcggcggcggcgatggcgacggcgaggaaggcgccgcgcatggtggcgatctgggcggtggtggtggtggtggtcgccgccgatctgttcggagcggcggtcgcgcggtcggcgtcggcgcgtcacgcggtggggaagaagcagcgggagttcgactacttcgcgctggcgctgcagtggcctggcaccatctgcgcctcaacccgccactgctgcgccatcaacggatgctgccggtagagcctcctcctcctcctccccgtctcctcccaccgccgccgccgcacgcgcgcgctcgtcggccggttttggtggtcgttacgattttcgcgcgcgcgccgcgaccttcggagattttttttcccctgatgcggttgcttttgcagctcggagccgctccagacgttcacgatccgtaagtgcgccgcgcggctgctcgatcgatcggtttaatcccaccctcgcgttcgatttggatgccgtttgctgctcgagcgaatcaatttctgattgatcgatgtgtgtgcgtgtgtattttgcgtactggatgaacagatgggctgtggccggactacgacgacgggacctggccggcgtgctgccgccacaccagcttcgacatggacaaggtacttggctgcagagctcctcctctttgtagctcgaatgctcgatgcttacacggttaattgaaagagtgacaatgacaaggtggttgtgctttggtgctaaccttatcgatgcatggattcgtcattcgatttttgtggtgtagatattgcccctgaagccgacgcttgagaagtactggccgtccctctactgctcatcctcttccacttgcttcagtggcaaggggcccttctgggctcatgaggtatataaaagtttcagaagtcaagaactaatggattggattatacaagtatacctcttttggatttgcaactgaccttttgtgctgttttcctgtctgtttgtcatatggtattcgatcattcgcggcatatctttagtggggtaatgttcttcaaatcattccaccttatgttatgagctttcttattgtttaactttctaacaggaagttattgattccacttgaaatatcacgtagttatatttactaggcactgatttgtcattactcaactcagctttctttttttctcagagaaacatggaacatgctcatccccggtagttaaggatgaattagagtatttcaccactgctcttgacctctacttcaaatacaacgtcacggtaagcatttgggcttgggcttactagttgtaggcttgtagcatcgagttgatttactttccagacaaaagtcactgtgtcacaaattacagcaacagtagccttttgtccaaataggtcagggtgttataaggacaaggcccaagttgagccacatgccatggcacaaaatcttgtcctttttcctctgattaaatcgcaccgcattgcaggaaatgttggcaagtggtggtatccatgtttcaaatggtaaacaatatgcgctaactgatgtcattgatgccatcaaatgtgcttttggggcctcaccgcaaattgtttgcaagaagggctcagttgaagaactgaggttatgctttgacaaagatttgaaggttagctctcctttttgttcttcgaacaacttcctacagtttgtatcatgaaaattatgctgcttttagaatgaacgaccaacagcatgcacattttgaaattatgttcctacaggcctgcagtttcatttgctaaaactcaagcatttaccaacctcaaacatgctacatctttctatatgtatgcctaatagtgaaaacaaaaaacttgatcactgttgaaacaccactaaactgtacggaattcaaggtgattatatgcatcatatagtgttttctgcttgtgtttcttcatgcccctattaaggaatgttttatctgttgtgttgaaatttctaaacatgtgctgcataaattttgactggtgagtatttttcccaaactagctacccatgtgaatattttccccaaaagttgggaatgtgcgcagtcctgcacgtgttatttggcaatgtctcacatggtcacatgttgcatatgctgtacaataaaatactataatctttctttttcaaagaaaacctgtacaatattgctaaactcggtggtatatttccagccccttgattgccttactactactgctaccaatgaaaacgtatcgaagaagaagtattgccctcgatacatcaccctgccaacatatgaccccataggtaagttcagttgctggaatgtaaatcattgttccaactcttgatgcgcatgctaatcctattgtctgattcgtctgaacatgattgcagtacatgctaattctactcgggagatcataacagtcgaaagtgaggtctatggatatctttacacatcctaagatacgattaccgcgagcaagaattacatggccatgatgaagccggtagttcagggctcttagctgcttaagacatactggggccggcattgaggttcaaggaaatgtatatctagataactcgattattacatttgtaagcacggcacgccagaacaacggagaatgtgattgtgtctgaaaaatcaattgctttatgtactatgcaaggttggaaaatagttcgtccatgtatatagtcattggtcagggtcatctgcgactgcaatctgctgaattataatggacagtggcaatcggtctg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0897200, RefSeq:Os01g0897200