Os01g0900200

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Revision as of 05:16, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0900200| Description = Conserved hypothetical protein| Version = NM_001051639.1 GI:115441648 GeneID:4325036| Length = 2993 bp| Definition ...")
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Gene Name

Os01g0900200

Description

Conserved hypothetical protein

Version

NM_001051639.1 GI:115441648 GeneID:4325036

Length

2993 bp

Definition

Oryza sativa Japonica Group Os01g0900200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:40918582..40921574

Sequence Coding Region

40919996..40920750,40921060..40921111

Expression

GEO Profiles:Os01g0900200

Genome Context

<gbrowseImage1> name=NC_008394:40918582..40921574 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:40918582..40921574 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaattcaataattagattacgtgctgctgctgtgagagctctctcaaaggatgctttgccgaattccgccaaagttggaaaactagttgctgggatcgtgaggacgaagggatacaatcgaaatgttgcagatcatcgtcagtctactggtgctcttcagatagtcaatgaggcaaagctaagaaatgatcaaatccacggaaataatctaatgcacacaattagaggtggtgtattcctccttggtaaagcgatatcttgcttggtaaatactccaaaatatcgagtgagctccacagcagcaatcaactatgagttggggagcagatctagaatgaatattcttggtgatagagggaactgcatggctgcttcctgcagtgttctggatgttcctcattttggagaacctagtaatgcatgcggaaatgggaagtcttctgaagatgatctgaatgaatgtagcagggaatacaggctacctcattcaaatgatggcacaaaactctcgattgatcctaatgatctgcgtacaataagtttgcctgaaggacaatcaccggaggtgtatctgcctggtctcgttattcatcttgttccagtaaagaatcatacctctccatttcagaagacacctgtgactcgacacaagagtcgcaagaacaagagttacaaagcatttatagccaatcgacaagattttatggaccttgttgttacacctcgtatgttccttgatcatcttccatggaggtgccactatgccatgcaaagggttatagaaactcggaaaagggcatgctaa</cdnaseq>

Protein Sequence

<aaseq>MNSIIRLRAAAVRALSKDALPNSAKVGKLVAGIVRTKGYNRNVA DHRQSTGALQIVNEAKLRNDQIHGNNLMHTIRGGVFLLGKAISCLVNTPKYRVSSTAA INYELGSRSRMNILGDRGNCMAASCSVLDVPHFGEPSNACGNGKSSEDDLNECSREYR LPHSNDGTKLSIDPNDLRTISLPEGQSPEVYLPGLVIHLVPVKNHTSPFQKTPVTRHK SRKNKSYKAFIANRQDFMDLVVTPRMFLDHLPWRCHYAMQRVIETRKRAC</aaseq>

Gene Sequence

<dnaseqindica>1415..2169#2479..2530#actgtacgctaagcttgaagggctgcccatccatcaaggttagcatggaaataatgtaactttatattttatatttgatgtggaacttaaatacatggatattttgatcagatgacagtcacacattcctaacaatcatattttatagatataaaaataccaaaatacccgtcagtaatatcttaagcatgacaagttggtaagtatagaatagattcttctctatgtacaaacaagaacccttcagttttttggactgaacgagtgacttgtttcgctaatactatagcaacttattcttgaaaaatttcaagttagcacctgggattaactgtcatcttgagaccgtctgcagataaaccagatgcagtgccagctggattcttatcttctttgctcggcgctggatgtgagtgccatggatacaatattgaaatcgttgggcattctttaggaggttctgtagctgcacttcttggtatcagagtaagttggcttattactatcaacgcacaggggaattcatttcaagttatttgattatgctggattatcaattttttattagcaccacgagtgaattgttttgggttttcacctgctcaactgtagaagtgtggatatgtgtcaatgaggcactggtatatttttgtattattttatacttccatgttagtattatatagtgttgaattaaccttgattgttttttgctggatcaacacaccttcataggattatttaggatttattgtttccatcagtctatggactttcaggagaatgtagaagggatcttgcaattttgcatgatgttattcctctaaaattttaggactgatatcgcaagtcgcaccttacaagaagggctcattagacaaagtggcaaacaactgttagtaacttagtttcaaacaaccccttatttgtcagagtagagaatatgcggaaagcttgttagttgaaagaaatgtggggcatgaagtgacacagttgtcaggaatgatatgggagttcgattaattaaacatcataacagccatttatgatgcaatattgtactaagttgtgtcaatcttcaagtcagtcaaaaaattagttcttgtgacttgtaagtgtgcatgtattcatgcaaacatacgaatttctttaagtcaattgtatttgtattatgcagctgtatggacgctttccaaaattacatgtatatgcatatggagcagcaccatgtgtggactatgtgatcgcagaagcatgttcacagtttgttaccaggtgatactgaacttgtcatacctatgaacctattgttcatttatttatttgttcatatataccagtcatgtgattttctaactaagtgcccatcaatcacagtattgtccacaatgatgaattttctgcccggttatccatgaattcaataattagattacgtgctgctgctgtgagagctctctcaaaggatgctttgccgaattccgccaaagttggaaaactagttgctgggatcgtgaggacgaagggatacaatcgaaatgttgcagatcatcgtcagtctactggtgctcttcagatagtcaatgaggcaaagctaagaaatgatcaaatccacggaaataatctaatgcacacaattagaggtggtgtattcctccttggtaaagcgatatcttgcttggtaaatactccaaaatatcgagtgagctccacagcagcaatcaactatgagttggggagcagatctagaatgaatattcttggtgatagagggaactgcatggctgcttcctgcagtgttctggatgttcctcattttggagaacctagtaatgcatgcggaaatgggaagtcttctgaagatgatctgaatgaatgtagcagggaatacaggctacctcattcaaatgatggcacaaaactctcgattgatcctaatgatctgcgtacaataagtttgcctgaaggacaatcaccggaggtgtatctgcctggtctcgttattcatcttgttccagtaaagaatcatacctctccatttcagaagacacctgtgactcgacacaagagtcgcaagaacaagagttacaaagcatttatagccaatcgacaagattttatggaccttgttgttacacctcgtatgttccttgatcatcttccatggaggtatatcttgagaactctgctcaaaccatattatgttgaaactcgttagctttaagggttgtatttctgtgccattcatactaagaataccttcagagtaaaccattgtatatcagctggattgaaattacactggtttcagattactctgtttcggtcaatcaatataatcataattgtcagtagaaaattatagatcaatgcttgtttcgttacaaggatcttatgcataattatttggttatggtgctagtatttttcagtggtgtatttttctggactaaaataattgatgctattgctttataggtgccactatgccatgcaaagggttatagaaactcggaaaagggcatgctaattcatgattcgtccaccagagatgatactgtgtgaagttaattttgcaactctccttaattcttgtagataagttcaggatgttaggatcatctgcttcttgcaggaggttggctgcatatacagtgttgactgtattactgtaactgtaagtagaacagttcagagctgaagggtgttgccaatgtgaaaaacatcacttggaccttagcatttgttgtactaggagtatctagctttacataggcttgctctgaggtcaaagtagagtacagcatgccactattatttatgaaacctttggtagtgagtaattatattagtctgtagcatcaaattttgctgcaatgttgttgtaactctagtgttcacacattacatgtaattgtctgaacaatcatgtaccatgtactcctacttgctgaataaagaaactagtttctgcagcgaagaaaagctgtccc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0900200, RefSeq:Os01g0900200