Os01g0900400

From RiceWiki
Revision as of 05:16, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0900400| Description = Lipase, class 3 family protein| Version = NM_001051640.2 GI:297598126 GeneID:4325037| Length = 1291 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0900400

Description

Lipase, class 3 family protein

Version

NM_001051640.2 GI:297598126 GeneID:4325037

Length

1291 bp

Definition

Oryza sativa Japonica Group Os01g0900400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:40933233..40934523

Sequence Coding Region

40933235..40934323

Expression

GEO Profiles:Os01g0900400

Genome Context

<gbrowseImage1> name=NC_008394:40933233..40934523 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:40933233..40934523 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gagccggcgccgcacccggtgctgaggggggaggtggcgcggtacggcgagctggtgggcgcgtgctacaaggcgttcgacctggacccggcgtcgcggaggtacctcaactgcaagtacgggagggagaggatgctggaggaggtcgggatgggcggcgccgggtacgaggtcacccgctacatctacgcggcggcggacgtcagcgtgccgaccatggagccgtcgacgagcgggcgcgggcggtggatcgggtacgtcgcggtgtccaccgacgagatgtcgcggcggctcgggcggcgcgacgtgctcgtctcgttccggggcacggtcacccccgccgagtggatggccaacctcatgagctcgctggaggcggcgcggctcgacccgtgcgacccgcgccccgacgtcaaggtggagtccgggttcctcagcctctacacctccgccgacaagacgtgccgcttcggcggcgccgggagctgccgggagcagctcctccgcgaggtgtcccgcctcgtcgccgcctactccggcggcggcgaggacgtcagcgtcacgctcgccggccacagcatgggcagcgcgctggcgctcctctccgcctacgacctcgccgagctcggcctcaaccgcgccgccccggtcaccgtcttctccttcggcgggccgagggtggggaacgcggcgttcaaggcgcgctgcgacgagctcggcgtcaaggcgctccgcgtcaccaacgtacacgacccgatcaccaagctccccggcgtcttcctcaacgaggccaccgccggcgtgctccgcccgtggcgccactcctgctacacccacgtcggcgtcgagctccccctcgacttcttcaaggtcggcgacctcgcctccgtccacgacctcgccacctacatctccctcctccgtggcgccgacaagaagcagcccgccgccgccgccgccgacgccggcggcgtgctcgccaaggtgatggacttcgtgggtcggcggcgcggcggcggcgcattgccgtggcacgacgcggcgatgatacagatgggcggcttggtgcagacgctcgggctaatctga</cdnaseq>

Protein Sequence

<aaseq>EPAPHPVLRGEVARYGELVGACYKAFDLDPASRRYLNCKYGRER MLEEVGMGGAGYEVTRYIYAAADVSVPTMEPSTSGRGRWIGYVAVSTDEMSRRLGRRD VLVSFRGTVTPAEWMANLMSSLEAARLDPCDPRPDVKVESGFLSLYTSADKTCRFGGA GSCREQLLREVSRLVAAYSGGGEDVSVTLAGHSMGSALALLSAYDLAELGLNRAAPVT VFSFGGPRVGNAAFKARCDELGVKALRVTNVHDPITKLPGVFLNEATAGVLRPWRHSC YTHVGVELPLDFFKVGDLASVHDLATYISLLRGADKKQPAAAAADAGGVLAKVMDFVG RRRGGGALPWHDAAMIQMGGLVQTLGLI</aaseq>

Gene Sequence

<dnaseqindica>3..1091#tggagccggcgccgcacccggtgctgaggggggaggtggcgcggtacggcgagctggtgggcgcgtgctacaaggcgttcgacctggacccggcgtcgcggaggtacctcaactgcaagtacgggagggagaggatgctggaggaggtcgggatgggcggcgccgggtacgaggtcacccgctacatctacgcggcggcggacgtcagcgtgccgaccatggagccgtcgacgagcgggcgcgggcggtggatcgggtacgtcgcggtgtccaccgacgagatgtcgcggcggctcgggcggcgcgacgtgctcgtctcgttccggggcacggtcacccccgccgagtggatggccaacctcatgagctcgctggaggcggcgcggctcgacccgtgcgacccgcgccccgacgtcaaggtggagtccgggttcctcagcctctacacctccgccgacaagacgtgccgcttcggcggcgccgggagctgccgggagcagctcctccgcgaggtgtcccgcctcgtcgccgcctactccggcggcggcgaggacgtcagcgtcacgctcgccggccacagcatgggcagcgcgctggcgctcctctccgcctacgacctcgccgagctcggcctcaaccgcgccgccccggtcaccgtcttctccttcggcgggccgagggtggggaacgcggcgttcaaggcgcgctgcgacgagctcggcgtcaaggcgctccgcgtcaccaacgtacacgacccgatcaccaagctccccggcgtcttcctcaacgaggccaccgccggcgtgctccgcccgtggcgccactcctgctacacccacgtcggcgtcgagctccccctcgacttcttcaaggtcggcgacctcgcctccgtccacgacctcgccacctacatctccctcctccgtggcgccgacaagaagcagcccgccgccgccgccgccgacgccggcggcgtgctcgccaaggtgatggacttcgtgggtcggcggcgcggcggcggcgcattgccgtggcacgacgcggcgatgatacagatgggcggcttggtgcagacgctcgggctaatctgacagagtcttaacccaccactgtcaagacggctaatcaagattaacagaccactaatcctcttcgacattttattcgagggttttatggtcgaatttattttttcttctttgatttgattctgtatagatagatcaaccatcatagagatatctcaaatcaaacacacacaaaaaagaaaaaaccccttttttttttgttc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0900400, RefSeq:Os01g0900400